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The map label for this gene is yhfE [H]

Identifier: 82750957

GI number: 82750957

Start: 1336677

End: 1337708

Strand: Direct

Name: yhfE [H]

Synonym: SAB1221

Alternate gene names: 82750957

Gene position: 1336677-1337708 (Clockwise)

Preceding gene: 82750955

Following gene: 82750958

Centisome position: 48.74

GC content: 33.04

Gene sequence:

>1032_bases
ATGGAACCAATATTAGAAATGATTAAAACATTAACAGGTATTAATAGTCCTTCAGGAGACACAGAAGAAGCAATTCAATT
TGTCGAAAAATATGCAAAAGACTTAGGTTATCAAACAACACTAACAAATAAAGGTGCGTTATTAATAACAGTGCCAGGCA
AAAATGATGAAGTACAACGCTGTATTACTGCTCATGTTGATACTTTAGGTGCAATGGTTAAAGAAATTAAAGAAGATGGG
CGCTTAGCAATAGAATTAATTGGAGGATTCACGTATAACGCGATTGAGGGTGAATATTGCCAAATTAAAACTGATGCTGG
TCAAATATATACAGGAACAATTTGTCTGCATGAAACAAGTGTTCATGTATATAGAAATAATCATGAAATACCTAGAGACC
AAAAGCATATGGAAATAAGAATTGATGAAGTAACTACATCAGAAGAAGATACAAAAAGTTTAGGTATTTCAGTAGGTGAT
TTTGTTAGCTTTGATCCACGTACAGTTATCACGTCATCAGGTTTTATTAAATCTCGTCATTTAGATGATAAAGCTAGCGT
AGCGATGATACTACAATTACTAAAGAAATTAAAAGAAGAGCAAATAATATTACCATATACAACGCAATTTTATATTTCTA
ATAACGAAGAAATAGGTTACGGTGCAAATGCATCAATTGATTCGAAAATCAAAGAATATATTGCATTAGATATGGGCGCG
TTGGGAGACGGTCAAGCATCGGATGAATATACAGTTTCTATTTGTGCCAAAGATGCTTCAGGTCCATATCATAAGCAATT
GAAATCACACCTAGTTAATCTTTGCAAAATAAATAATATTCCATATAAAGTAGACATATATCCATATTATGGTTCAGATG
CTTCAGCAGCTTTACATGCTGGTGCGGATATCAGACATGGTTTATTTGGGGCTGGCATTGAATCATCTCATGCAATGGAA
CGAACACATATTGATTCTATTAAAGCGACAGAGAAATTATTATATGCATATTGCTTATCACCAATTGAGTAA

Upstream 100 bases:

>100_bases
AATAGCAAATAAAAATCGATAATAGCATTAATAGATAAACAGATATAAATCATCTACAATAAAGAGTATAGTAACACAAT
GGCAACGGAGGGGTAAATCA

Downstream 100 bases:

>100_bases
ACAATTAGTGTTGACAAATGTGAACGACCTATGTAATATAATGAGCTATAAAAATAATTAGAATTTTCTAAAGAAATAGT
AGCAGATATGAAACGTAGCA

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNKGALLITVPGKNDEVQRCITAHVDTLGAMVKEIKEDG
RLAIELIGGFTYNAIEGEYCQIKTDAGQIYTGTICLHETSVHVYRNNHEIPRDQKHMEIRIDEVTTSEEDTKSLGISVGD
FVSFDPRTVITSSGFIKSRHLDDKASVAMILQLLKKLKEEQIILPYTTQFYISNNEEIGYGANASIDSKIKEYIALDMGA
LGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCKINNIPYKVDIYPYYGSDASAALHAGADIRHGLFGAGIESSHAME
RTHIDSIKATEKLLYAYCLSPIE

Sequences:

>Translated_343_residues
MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNKGALLITVPGKNDEVQRCITAHVDTLGAMVKEIKEDG
RLAIELIGGFTYNAIEGEYCQIKTDAGQIYTGTICLHETSVHVYRNNHEIPRDQKHMEIRIDEVTTSEEDTKSLGISVGD
FVSFDPRTVITSSGFIKSRHLDDKASVAMILQLLKKLKEEQIILPYTTQFYISNNEEIGYGANASIDSKIKEYIALDMGA
LGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCKINNIPYKVDIYPYYGSDASAALHAGADIRHGLFGAGIESSHAME
RTHIDSIKATEKLLYAYCLSPIE
>Mature_343_residues
MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNKGALLITVPGKNDEVQRCITAHVDTLGAMVKEIKEDG
RLAIELIGGFTYNAIEGEYCQIKTDAGQIYTGTICLHETSVHVYRNNHEIPRDQKHMEIRIDEVTTSEEDTKSLGISVGD
FVSFDPRTVITSSGFIKSRHLDDKASVAMILQLLKKLKEEQIILPYTTQFYISNNEEIGYGANASIDSKIKEYIALDMGA
LGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCKINNIPYKVDIYPYYGSDASAALHAGADIRHGLFGAGIESSHAME
RTHIDSIKATEKLLYAYCLSPIE

Specific function: Unknown

COG id: COG1363

COG function: function code G; Cellulase M and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M42 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008007 [H]

Pfam domain/function: PF05343 Peptidase_M42 [H]

EC number: NA

Molecular weight: Translated: 37882; Mature: 37882

Theoretical pI: Translated: 5.03; Mature: 5.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNKGALLITVPGKNDEVQR
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHH
CITAHVDTLGAMVKEIKEDGRLAIELIGGFTYNAIEGEYCQIKTDAGQIYTGTICLHETS
HHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEEECCCEEEEEEEEEEECE
VHVYRNNHEIPRDQKHMEIRIDEVTTSEEDTKSLGISVGDFVSFDPRTVITSSGFIKSRH
EEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCHHCCCCCCCCEEEECCCCEEECC
LDDKASVAMILQLLKKLKEEQIILPYTTQFYISNNEEIGYGANASIDSKIKEYIALDMGA
CCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
LGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCKINNIPYKVDIYPYYGSDASAALHA
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHC
GADIRHGLFGAGIESSHAMERTHIDSIKATEKLLYAYCLSPIE
CCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MEPILEMIKTLTGINSPSGDTEEAIQFVEKYAKDLGYQTTLTNKGALLITVPGKNDEVQR
CCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEEEECCCCHHHHH
CITAHVDTLGAMVKEIKEDGRLAIELIGGFTYNAIEGEYCQIKTDAGQIYTGTICLHETS
HHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEEECCCEEEEEEEEEEECE
VHVYRNNHEIPRDQKHMEIRIDEVTTSEEDTKSLGISVGDFVSFDPRTVITSSGFIKSRH
EEEEECCCCCCCCCCCEEEEEEECCCCCCHHHHHCCCHHCCCCCCCCEEEECCCCEEECC
LDDKASVAMILQLLKKLKEEQIILPYTTQFYISNNEEIGYGANASIDSKIKEYIALDMGA
CCCHHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCC
LGDGQASDEYTVSICAKDASGPYHKQLKSHLVNLCKINNIPYKVDIYPYYGSDASAALHA
CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHC
GADIRHGLFGAGIESSHAMERTHIDSIKATEKLLYAYCLSPIE
CCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]