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The map label for this gene is glcT [H]

Identifier: 82750950

GI number: 82750950

Start: 1326571

End: 1327422

Strand: Direct

Name: glcT [H]

Synonym: SAB1214

Alternate gene names: 82750950

Gene position: 1326571-1327422 (Clockwise)

Preceding gene: 82750949

Following gene: 82750951

Centisome position: 48.37

GC content: 27.46

Gene sequence:

>852_bases
ATGGGAGAATATATTGTTACTAAAACATTGAACAACAATGTCGTAGTATGTACTAATAATGATCAAGAAGTTATTTTAAT
CGGTAAAGGTATTGGTTTTAACAAAAAAGAGGGAATGGCGTTAAACGACCAAACTATTACAATAGAGAAAATTTATAAAT
TAGAGAGTGAGCAACAAAAAGCACATTATAAAAGTTTAGTTGAAATCGCTGATGACAATGTATTACAAGTAATTATTGAT
TCGTTAAATTTTATTTCTAATACTGCGATGAATGTTGATTCAAAACAACTTGTAATTTCATTAACGGATCATATTATATT
TGCATATAAACGCTTAAAACAAAATCAAGTTATTAGCAATCCATTTGTTATGGAAACTATGCAGTTATATAGTGATGCAT
ATCATATTGCTAAACAGGTGATTGATCAGTTAAATGCAGCATTAGATGTACATTTTCCTGAAGATGAGATAGGATTTATT
GCATTACATATTGCATCTAACACAGAAGATTTATCTATGCATGAGATGACTTTGATCAATAATGTTATTAAAAAAGGTAT
AGATATCATTGAATCAGACCTTGTGACAACTGTTGATAAGGAATCATTACAATACCAACGTTTTATAAGACATGTACAAT
TTTTAATTCGCCGATTAAGAAGAAAAGAATATATACATGCACAAGATGATTTTGTGTCTATGATTAAAAATCACTATCCG
ATTTGCTATAACACAGCATATAAAATTTTAACTATGATACAAAAACAATTTGATGTTAATATCAGTGAGTCTGAAATTAT
ATATTTAACATTACACATTCATCATTTTGAAGAAAGGATTAATCAATCCTAA

Upstream 100 bases:

>100_bases
AGGATAGGCGTGTAATAGAACACAAGTATTTAAATTATTATACTTTCAAGTTAGACATTTCCGATATATAATCTTAATAA
TAGAAAAATAGGTGATGATA

Downstream 100 bases:

>100_bases
ATTAATTGTATTACACGGGCGTTTCGTTACTGTAAAGGGTATTTGTATGGTATCATTGATGTTAGTAATTTTACATAAGT
GGACTGTTTTTATACAACAT

Product: transcription antiterminator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIID
SLNFISNTAMNVDSKQLVISLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFI
ALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS

Sequences:

>Translated_283_residues
MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIID
SLNFISNTAMNVDSKQLVISLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFI
ALHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS
>Mature_282_residues
GEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQKAHYKSLVEIADDNVLQVIIDS
LNFISNTAMNVDSKQLVISLTDHIIFAYKRLKQNQVISNPFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFIA
LHIASNTEDLSMHEMTLINNVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYPI
CYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS

Specific function: Mediates The Positive Regulation Of The Beta-Glucoside (Bgl) Operon By Functioning As A Transcriptional Antiterminator. This Is A RNA-Binding Protein That Recognizes A Specific Sequence Located Just Upstream Of Two Termination Sites Within The Operon. [C

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI1790160, Length=272, Percent_Identity=30.1470588235294, Blast_Score=142, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004341
- InterPro:   IPR011608
- InterPro:   IPR001550 [H]

Pfam domain/function: PF03123 CAT_RBD; PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 32837; Mature: 32706

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: PS00654 ANTITERMINATORS_BGLG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQK
CCCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEECCCEEEHHHHHHHCCHHHH
AHYKSLVEIADDNVLQVIIDSLNFISNTAMNVDSKQLVISLTDHIIFAYKRLKQNQVISN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCC
PFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFIALHIASNTEDLSMHEMTLIN
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH
NVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS
EEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHCCC
>Mature Secondary Structure 
GEYIVTKTLNNNVVVCTNNDQEVILIGKGIGFNKKEGMALNDQTITIEKIYKLESEQQK
CCEEEEEECCCCEEEEECCCCEEEEEECCCCCCCCCCCEECCCEEEHHHHHHHCCHHHH
AHYKSLVEIADDNVLQVIIDSLNFISNTAMNVDSKQLVISLTDHIIFAYKRLKQNQVISN
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCHHEEEHHHHHHHHHHHHHHHCCCCCC
PFVMETMQLYSDAYHIAKQVIDQLNAALDVHFPEDEIGFIALHIASNTEDLSMHEMTLIN
CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHH
NVIKKGIDIIESDLVTTVDKESLQYQRFIRHVQFLIRRLRRKEYIHAQDDFVSMIKNHYP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCC
ICYNTAYKILTMIQKQFDVNISESEIIYLTLHIHHFEERINQS
EEHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA