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The map label for this gene is tsf

Identifier: 82750858

GI number: 82750858

Start: 1211166

End: 1212047

Strand: Direct

Name: tsf

Synonym: SAB1119

Alternate gene names: 82750858

Gene position: 1211166-1212047 (Clockwise)

Preceding gene: 82750857

Following gene: 82750859

Centisome position: 44.16

GC content: 36.96

Gene sequence:

>882_bases
ATGGCAACTATTTCAGCAAAACTTGTTAAAGAATTACGTGAAAAAACTGGCGCGGGTATGATGGATTGTAAAAAAGCGCT
AACTGAAACTGATGGTGACATCGATAAAGCGATTGACTACCTACGTGAAAAAGGTATTGCTAAAGCAGCTAAAAAAGCAG
ACCGTATTGCGGCTGAAGGTTTAGTACATGTAGAAACTAAAGGTAGCGACGCAGTTATCGTTGAAATCAACTCTGAAACA
GACTTTGTTGCTCGTAACGAAGGTTTCCAAGAGTTAGTTAAAGAAATCGCTAATCAAGTATTAGATACAAAAGCTGAAAC
TGTTGAAGCTTTAATGGAAACAACTTTCCCAAATGGTAAATCAGTTGATGAAAGAATTAAAGAAGCAATTTCAACAATCG
GTGAAAAATTAAGTGTTCGTCGTTTTGCTATCAGAAATAAAAATGATAAGGACGCTTTCGGCGCTTACTTACACATGGGT
GGACGCATTGGTGTATTAGCAGTTGTTGAAGGTTCAACTGACGAAGAAGCAGCAAGAGACGTTGCTATGCATATCGCTGC
AATCAACCCTAAATATGTTTCTTCTGAACAAGTTAGCGAAGAAGAAATCAACCACGAAAGAGAAGTTTTAAAACAACAAG
CATTAAATGAAGGTAAACCAGAAAACATCGTTGAAAAAATGGTGGAAGGACGTTTACGTAAATACTTACAAGAAATTTGT
GCTGTAGATCAAGACTTCGTTAAAAACCCTGATGTAACAGTTGAAGCTTTCTTAAAAACAAAAGGTGGAAAACTTGTTGA
CTTCGTACGCTATGAAGTAGGCGAAGGTATGGAAAAACGCGAAGAAAACTTTGCGGATGAAGTTAAAGGACAAATGAAAT
AA

Upstream 100 bases:

>100_bases
GAGGCAAATTACAAATATTCAATTAGAGTATTGGCAATCTTGCCTATAATAATGCTAAAATCATAATATATAAAATGATA
ACTTATTGGAGGAATAATGA

Downstream 100 bases:

>100_bases
TCTGTCATAAAGTAAAACAAGGAAGAAGACACCTTTAATGTTGCTTTATTAAAATGTAAATCATTCTAATAAAACGACAA
CTGTGTCTTCTTTACTTGTA

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVETKGSDAVIVEINSET
DFVARNEGFQELVKEIANQVLDTKAETVEALMETTFPNGKSVDERIKEAISTIGEKLSVRRFAIRNKNDKDAFGAYLHMG
GRIGVLAVVEGSTDEEAARDVAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEIC
AVDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEGMEKREENFADEVKGQMK

Sequences:

>Translated_293_residues
MATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVETKGSDAVIVEINSET
DFVARNEGFQELVKEIANQVLDTKAETVEALMETTFPNGKSVDERIKEAISTIGEKLSVRRFAIRNKNDKDAFGAYLHMG
GRIGVLAVVEGSTDEEAARDVAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEIC
AVDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEGMEKREENFADEVKGQMK
>Mature_292_residues
ATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEGLVHVETKGSDAVIVEINSETD
FVARNEGFQELVKEIANQVLDTKAETVEALMETTFPNGKSVDERIKEAISTIGEKLSVRRFAIRNKNDKDAFGAYLHMGG
RIGVLAVVEGSTDEEAARDVAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEICA
VDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEGMEKREENFADEVKGQMK

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=301, Percent_Identity=27.2425249169435, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI291084500, Length=322, Percent_Identity=25.4658385093168, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI291084498, Length=97, Percent_Identity=43.298969072165, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI291084502, Length=101, Percent_Identity=43.5643564356436, Blast_Score=80, Evalue=3e-15,
Organism=Escherichia coli, GI1786366, Length=293, Percent_Identity=43.6860068259386, Blast_Score=228, Evalue=3e-61,
Organism=Caenorhabditis elegans, GI17561440, Length=300, Percent_Identity=29.3333333333333, Blast_Score=120, Evalue=1e-27,
Organism=Drosophila melanogaster, GI19921466, Length=288, Percent_Identity=29.5138888888889, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 32511; Mature: 32380

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEG
CCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVHVETKGSDAVIVEINSETDFVARNEGFQELVKEIANQVLDTKAETVEALMETTFPNGK
EEEEEECCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SVDERIKEAISTIGEKLSVRRFAIRNKNDKDAFGAYLHMGGRIGVLAVVEGSTDEEAARD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHH
VAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEIC
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AVDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEGMEKREENFADEVKGQMK
CCCHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ATISAKLVKELREKTGAGMMDCKKALTETDGDIDKAIDYLREKGIAKAAKKADRIAAEG
CCHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LVHVETKGSDAVIVEINSETDFVARNEGFQELVKEIANQVLDTKAETVEALMETTFPNGK
EEEEEECCCCEEEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
SVDERIKEAISTIGEKLSVRRFAIRNKNDKDAFGAYLHMGGRIGVLAVVEGSTDEEAARD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHHHH
VAMHIAAINPKYVSSEQVSEEEINHEREVLKQQALNEGKPENIVEKMVEGRLRKYLQEIC
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
AVDQDFVKNPDVTVEAFLKTKGGKLVDFVRYEVGEGMEKREENFADEVKGQMK
CCCHHHHCCCCCHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA