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The map label for this gene is glpQ1 [H]

Identifier: 82750728

GI number: 82750728

Start: 1068323

End: 1069249

Strand: Reverse

Name: glpQ1 [H]

Synonym: SAB0985c

Alternate gene names: 82750728

Gene position: 1069249-1068323 (Counterclockwise)

Preceding gene: 82750730

Following gene: 82750723

Centisome position: 38.99

GC content: 36.03

Gene sequence:

>927_bases
ATGAAAAAAGTAAACAGAAACATTTTAAATGCGGTACTAGTCGGTGCTGGATTTGTAAGTAGTTTGTTAATGATAAATAA
AAATAAAGTGATTACTAGAAAGCAAACCATCCCTGCTTTTTTCAAAGGCAATGCACCATATATATTTGCGCATCGTGGTG
GTATGGCTTTAAGACCAGAGCAAACGCAACTTGCATTTGACTATGCTAAACAATTAGGCGTTGATGGCTTTGAAACAGAT
GTGAGACTCACAAAAGATCAACAGCTTATCGTTTTTCATGACGCAACTGTCGATAGAACGACGAACGGCTCTGGAAAAGT
TAGTGCCCATACATTAGCAGAATTAAAGAAATTAGACGCAGGTTATCACTTCAAAGATATCAATGGACTAACACCATATC
GTGGTCATGCACACACAGCTATACTAACCTTCGATGAGTTGCTGAAGCAATATCCTGATATGTATATAAACGTAGACTTA
AAAGATGCTCCTGAATCCTATGAAGGCTCAATCGCACCACAAATTATGTTTGATATAATTGCAGAAAATCAAGCATTTGA
CCGTGTTCTTGTGACAAGTTTTTATAAAGAACAAATCGTACGTTTTAATAAAATTGCACAAGGATCTGTTGCAATTGGTG
CTAGCCAACAGGAAGTTACAGAGGCATTTTTAAAATATCATTTATTAGGTGGCAGGTACTACCAACCATTAGCACAAACG
TTCCAAATGCCTACTCATTTTAAAGGCATTGATTTGACTTCATCTCGTTTTATCAAATGGTTAAATGATATGAATGTCAT
TCCAGGCTATTATGGCGTAAATAGTATAGATCTGATGAATGATTTATACCAAAAAGGTGCACACACGATTGTGACAGATC
GACCAGATTTAGCACAACAATTCAAACAAACAATCCCAAACAAATAA

Upstream 100 bases:

>100_bases
CAATTCTCAAAAGCATCACTATATGATTAACCACACATTTCGCTGTAGTCAGAACTATGAATTTGTTAAGCTATAAAAGT
AAACGAGGAGGAATTTTTTT

Downstream 100 bases:

>100_bases
AAACATCGAGTCAGATGCTAGTTAGTGGTTTCAATAACCCTCTTTTTCTGACTCGATGTTTTTTATAATGAACAATTACA
GGATCCGCCCGTCGCACAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase 1 [H]

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MKKVNRNILNAVLVGAGFVSSLLMINKNKVITRKQTIPAFFKGNAPYIFAHRGGMALRPEQTQLAFDYAKQLGVDGFETD
VRLTKDQQLIVFHDATVDRTTNGSGKVSAHTLAELKKLDAGYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDL
KDAPESYEGSIAPQIMFDIIAENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQEVTEAFLKYHLLGGRYYQPLAQT
FQMPTHFKGIDLTSSRFIKWLNDMNVIPGYYGVNSIDLMNDLYQKGAHTIVTDRPDLAQQFKQTIPNK

Sequences:

>Translated_308_residues
MKKVNRNILNAVLVGAGFVSSLLMINKNKVITRKQTIPAFFKGNAPYIFAHRGGMALRPEQTQLAFDYAKQLGVDGFETD
VRLTKDQQLIVFHDATVDRTTNGSGKVSAHTLAELKKLDAGYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDL
KDAPESYEGSIAPQIMFDIIAENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQEVTEAFLKYHLLGGRYYQPLAQT
FQMPTHFKGIDLTSSRFIKWLNDMNVIPGYYGVNSIDLMNDLYQKGAHTIVTDRPDLAQQFKQTIPNK
>Mature_308_residues
MKKVNRNILNAVLVGAGFVSSLLMINKNKVITRKQTIPAFFKGNAPYIFAHRGGMALRPEQTQLAFDYAKQLGVDGFETD
VRLTKDQQLIVFHDATVDRTTNGSGKVSAHTLAELKKLDAGYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDL
KDAPESYEGSIAPQIMFDIIAENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQEVTEAFLKYHLLGGRYYQPLAQT
FQMPTHFKGIDLTSSRFIKWLNDMNVIPGYYGVNSIDLMNDLYQKGAHTIVTDRPDLAQQFKQTIPNK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GDPD domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17542344, Length=297, Percent_Identity=27.2727272727273, Blast_Score=69, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 34733; Mature: 34733

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVNRNILNAVLVGAGFVSSLLMINKNKVITRKQTIPAFFKGNAPYIFAHRGGMALRPE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCEEEEECCCEEECCC
QTQLAFDYAKQLGVDGFETDVRLTKDQQLIVFHDATVDRTTNGSGKVSAHTLAELKKLDA
HHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC
GYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDLKDAPESYEGSIAPQIMFDII
CCCEECCCCCCCCCCCCCEEEEEHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
AENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQEVTEAFLKYHLLGGRYYQPLAQT
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH
FQMPTHFKGIDLTSSRFIKWLNDMNVIPGYYGVNSIDLMNDLYQKGAHTIVTDRPDLAQQ
HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHH
FKQTIPNK
HHHHCCCC
>Mature Secondary Structure
MKKVNRNILNAVLVGAGFVSSLLMINKNKVITRKQTIPAFFKGNAPYIFAHRGGMALRPE
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCEECCCCCEEEEECCCEEECCC
QTQLAFDYAKQLGVDGFETDVRLTKDQQLIVFHDATVDRTTNGSGKVSAHTLAELKKLDA
HHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCC
GYHFKDINGLTPYRGHAHTAILTFDELLKQYPDMYINVDLKDAPESYEGSIAPQIMFDII
CCCEECCCCCCCCCCCCCEEEEEHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHH
AENQAFDRVLVTSFYKEQIVRFNKIAQGSVAIGASQQEVTEAFLKYHLLGGRYYQPLAQT
HCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCHHHHHHHHH
FQMPTHFKGIDLTSSRFIKWLNDMNVIPGYYGVNSIDLMNDLYQKGAHTIVTDRPDLAQQ
HCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHH
FKQTIPNK
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]