| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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Identifier: 82750667
GI number: 82750667
Start: 1002493
End: 1003686
Strand: Direct
Name: fmt
Synonym: SAB0923
Alternate gene names: 82750667
Gene position: 1002493-1003686 (Clockwise)
Preceding gene: 82750657
Following gene: 82750675
Centisome position: 36.55
GC content: 27.89
Gene sequence:
>1194_bases ATGAAATTTAATAAAGTAAAACTAGTTATACATGTGTGTGTACTATTATTTATCATTATTTCTATAGCGTTAATTTTTCA TCGATTACAGACGAAGACACATTCTATAGAACCAATACATAAGGAAACAAAATTATCAGACAATGAAAAATATTTAGTAG ATCGTAATAAGGAAAAGGTTGCGCCGTCTAAACTAAAAGAAGTATATAATAGCAAGGATCCTAAATATAAGAAAATTGAC AAGTATTTACAAAGTTCATTATTTAACGGTTCAGTAGCTATATATGAAAATGGCAAATTGAAAATGAGTAAAGGTTATGG ATATCAAGATTTTGAAAAAGGTATTAAAAACACACCGAATACGATGTTTTTAATAGGTTCAGCTCAAAAATTTTCAACAG GGTTACTGTTAAAACAGTTAGAAGAAGAACATAAAATAAATATCAATGATCCAGTAAGTAAATACCTTCCATGGTTTAAA ACATCTAAGCCTATCCCATTGAAAGATTTGATGTTGCATCAAAGTGGATTATATAAATATAAATCCTCAAAAGATTATAA AAACTTAGATCAAGCAGTTAAAGCGATTCAAAAACGTGGTATTGATCCTAAGAAATACAAAAAGCATATGTATAACGATG GGAATTATTTAGTACTTGCTAAAGTTATTGAAGAAGTTACAGGTAAATCTTATGCTGAGAATTATTATACAAAAATAGGA AATCCTTTAAAACTTCAGCACACAGCATTTTATGATGAACAACCTTTTAAAAAATATCTAGCAAAAGGTTATGCTTATAA TAGTACAGGACTTTCATTCTTAAGACCTAATATTTTGGATCAATACTATGGTGCAGGTAATTTATATATGACACCAACAG ATATGGGTAAATTAATTACTCAAATACAACAATATAAATTATTCAGTCCTAAAATAACCAATCCATTATTACATGAGTTT GGTACGAAACAGTATCCAGATGAATATCGATATGGTTTCTATGTTAAGCCAACATTGAATAGACTTAACGGGGGATTCTT TGGACAAGTCTTTACTGTTTACTATAATGATAAGTATGTAGTTGTACTTGCATTAAATGTAAAAGGAAACAATGAAGTTC GAATCAAACATATTTATAATGATATTTTAAAACAAAATAAACCTTACAATACGAAGGGTGTTATTGTTCAATAA
Upstream 100 bases:
>100_bases GAATGATAAATTAATTTTTGTAAGTTGTATTATTAGGAATCTAGGTTCAAAGTTTTAACTATTTAAATATATAATGAATA CATTGTGAGGCTATTATCAA
Downstream 100 bases:
>100_bases TTAATATAGAAGATATAACATGTATATGGCATTAAGGCATCGACCTTATCTGGCCAGTATACGAGTTATATCTTCTTTTT TATAGTGGTAAAAAGTTTAA
Product: autolysis and methicillin resistant-related protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKFNKVKLVIHVCVLLFIIISIALIFHRLQTKTHSIEPIHKETKLSDNEKYLVDRNKEKVAPSKLKEVYNSKDPKYKKID KYLQSSLFNGSVAIYENGKLKMSKGYGYQDFEKGIKNTPNTMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYLPWFK TSKPIPLKDLMLHQSGLYKYKSSKDYKNLDQAVKAIQKRGIDPKKYKKHMYNDGNYLVLAKVIEEVTGKSYAENYYTKIG NPLKLQHTAFYDEQPFKKYLAKGYAYNSTGLSFLRPNILDQYYGAGNLYMTPTDMGKLITQIQQYKLFSPKITNPLLHEF GTKQYPDEYRYGFYVKPTLNRLNGGFFGQVFTVYYNDKYVVVLALNVKGNNEVRIKHIYNDILKQNKPYNTKGVIVQ
Sequences:
>Translated_397_residues MKFNKVKLVIHVCVLLFIIISIALIFHRLQTKTHSIEPIHKETKLSDNEKYLVDRNKEKVAPSKLKEVYNSKDPKYKKID KYLQSSLFNGSVAIYENGKLKMSKGYGYQDFEKGIKNTPNTMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYLPWFK TSKPIPLKDLMLHQSGLYKYKSSKDYKNLDQAVKAIQKRGIDPKKYKKHMYNDGNYLVLAKVIEEVTGKSYAENYYTKIG NPLKLQHTAFYDEQPFKKYLAKGYAYNSTGLSFLRPNILDQYYGAGNLYMTPTDMGKLITQIQQYKLFSPKITNPLLHEF GTKQYPDEYRYGFYVKPTLNRLNGGFFGQVFTVYYNDKYVVVLALNVKGNNEVRIKHIYNDILKQNKPYNTKGVIVQ >Mature_397_residues MKFNKVKLVIHVCVLLFIIISIALIFHRLQTKTHSIEPIHKETKLSDNEKYLVDRNKEKVAPSKLKEVYNSKDPKYKKID KYLQSSLFNGSVAIYENGKLKMSKGYGYQDFEKGIKNTPNTMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYLPWFK TSKPIPLKDLMLHQSGLYKYKSSKDYKNLDQAVKAIQKRGIDPKKYKKHMYNDGNYLVLAKVIEEVTGKSYAENYYTKIG NPLKLQHTAFYDEQPFKKYLAKGYAYNSTGLSFLRPNILDQYYGAGNLYMTPTDMGKLITQIQQYKLFSPKITNPLLHEF GTKQYPDEYRYGFYVKPTLNRLNGGFFGQVFTVYYNDKYVVVLALNVKGNNEVRIKHIYNDILKQNKPYNTKGVIVQ
Specific function: Affects the methicillin resistance level and autolysis in the presence of Triton X-100 as well as the cell wall structure but its precise function is unknown [H]
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001466 [H]
Pfam domain/function: PF00144 Beta-lactamase [H]
EC number: NA
Molecular weight: Translated: 46137; Mature: 46137
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFNKVKLVIHVCVLLFIIISIALIFHRLQTKTHSIEPIHKETKLSDNEKYLVDRNKEKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEECCCCCC APSKLKEVYNSKDPKYKKIDKYLQSSLFNGSVAIYENGKLKMSKGYGYQDFEKGIKNTPN CHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHHHHHHCCCCC TMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYLPWFKTSKPIPLKDLMLHQSGLYKY EEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCC KSSKDYKNLDQAVKAIQKRGIDPKKYKKHMYNDGNYLVLAKVIEEVTGKSYAENYYTKIG CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHHHCC NPLKLQHTAFYDEQPFKKYLAKGYAYNSTGLSFLRPNILDQYYGAGNLYMTPTDMGKLIT CCEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHCHHHHHHHCCCCCEEECCHHHHHHHH QIQQYKLFSPKITNPLLHEFGTKQYPDEYRYGFYVKPTLNRLNGGFFGQVFTVYYNDKYV HHHHHHCCCCCCCCHHHHHCCCCCCCCHHCCCEEECCHHHHCCCCEEEEEEEEEECCEEE VVLALNVKGNNEVRIKHIYNDILKQNKPYNTKGVIVQ EEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCEEC >Mature Secondary Structure MKFNKVKLVIHVCVLLFIIISIALIFHRLQTKTHSIEPIHKETKLSDNEKYLVDRNKEKV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCEEEECCCCCC APSKLKEVYNSKDPKYKKIDKYLQSSLFNGSVAIYENGKLKMSKGYGYQDFEKGIKNTPN CHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEEEECCEEEECCCCCHHHHHHHHCCCCC TMFLIGSAQKFSTGLLLKQLEEEHKININDPVSKYLPWFKTSKPIPLKDLMLHQSGLYKY EEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHCCCCCC KSSKDYKNLDQAVKAIQKRGIDPKKYKKHMYNDGNYLVLAKVIEEVTGKSYAENYYTKIG CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEHHHHHHHHHCCHHHHHHHHHCC NPLKLQHTAFYDEQPFKKYLAKGYAYNSTGLSFLRPNILDQYYGAGNLYMTPTDMGKLIT CCEEEEEEECCCCCHHHHHHHHCCCCCCCCHHHHCHHHHHHHCCCCCEEECCHHHHHHHH QIQQYKLFSPKITNPLLHEFGTKQYPDEYRYGFYVKPTLNRLNGGFFGQVFTVYYNDKYV HHHHHHCCCCCCCCHHHHHCCCCCCCCHHCCCEEECCHHHHCCCCEEEEEEEEEECCEEE VVLALNVKGNNEVRIKHIYNDILKQNKPYNTKGVIVQ EEEEEEECCCCCEEHHHHHHHHHHCCCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9371333 [H]