Click here to switch to the map view.

The map label for this gene is ytxM [H]

Identifier: 82750656

GI number: 82750656

Start: 987585

End: 988388

Strand: Direct

Name: ytxM [H]

Synonym: SAB0911

Alternate gene names: 82750656

Gene position: 987585-988388 (Clockwise)

Preceding gene: 82750655

Following gene: 82750657

Centisome position: 36.01

GC content: 32.59

Gene sequence:

>804_bases
ATGACACATTATAATTACTATGAAGCAAACGTTGAGACTAATCAAGTTTTAGTATTACTGCATGGTTTTCTTAGCGACAG
TCGTACTTATCATAATCACATCGATAAATATACTAATATCTGTCATGTCATCACTATAGACTTACCAGGACATGGCGAAG
ATCAGTCTTCAATGGATGAAACGTGGAATTTTGATTATATTACGACGTTGTTAGACCGAATTTTAGATAAATATAAAGAT
AAATCAATAACATTGTTTGGATATTCAATGGGTGGGCGTGTTGCATTATATTATGCAATTAATGGTCACATCCCTATATC
TAATTTGATATTAGAAAGTACGTCACCAGGTATTAAAGAAGAAGCAAATCAATTGGAACGCCGTCTTGTTGATGATGCAC
GTGCTAAAGTATTAGACATAGCAGGTATTGAATTATTTGTTAATGATTGGGAAAAGTTGCCATTATTTCAATCGCAACTA
GAATTACCAGTTGAAATACAACATCAAATAAGACAACAACGATTGTCTCAATCGCCACAGAAAATGGCCAAAGCATTAAG
AGATTATGGTACTGGTCAAATGCCAAACTTATGGCCGCGCCTGAAAGAAATTAAAGTACCAACATTAATATTAGCTGGAG
AATATGATGAAAAATTTGTACAAATTGCGAAAAAAATGGCAAATTTAATTCCTAATAGTAAATGTAAATTAATTTCTGCT
ACAGGTCATACAATTCATGTGGAAGATAGTGATGAATTTGATACAATGATATTAGGACTTTTAAAGGAGGAGCAAAATGA
CTAA

Upstream 100 bases:

>100_bases
TTGTTATCTGAAACTTCGACGATTTATGAATTGATAACGAATCGCGAAGATAACTTTAAACAGCATCAAATTTTATATCA
GAAATTGAGTGAAATGATTC

Downstream 100 bases:

>100_bases
CAGACAATGGGAAACACTTAGAGAATATGATGAAATCAATTATGAATTTTACGAAGGGATTGCTAAGGTAACAATAAATC
GCCCTGAAGTACGCAATGCG

Product: hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MTHYNYYEANVETNQVLVLLHGFLSDSRTYHNHIDKYTNICHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKD
KSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQL
ELPVEIQHQIRQQRLSQSPQKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKKMANLIPNSKCKLISA
TGHTIHVEDSDEFDTMILGLLKEEQND

Sequences:

>Translated_267_residues
MTHYNYYEANVETNQVLVLLHGFLSDSRTYHNHIDKYTNICHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKD
KSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQL
ELPVEIQHQIRQQRLSQSPQKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKKMANLIPNSKCKLISA
TGHTIHVEDSDEFDTMILGLLKEEQND
>Mature_266_residues
THYNYYEANVETNQVLVLLHGFLSDSRTYHNHIDKYTNICHVITIDLPGHGEDQSSMDETWNFDYITTLLDRILDKYKDK
SITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKEEANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLE
LPVEIQHQIRQQRLSQSPQKMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKKMANLIPNSKCKLISAT
GHTIHVEDSDEFDTMILGLLKEEQND

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lipase/esterase LIP3/BchO family [H]

Homologues:

Organism=Escherichia coli, GI1788598, Length=234, Percent_Identity=28.2051282051282, Blast_Score=92, Evalue=5e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR000639
- InterPro:   IPR022485 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 30650; Mature: 30519

Theoretical pI: Translated: 5.35; Mature: 5.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHYNYYEANVETNQVLVLLHGFLSDSRTYHNHIDKYTNICHVITIDLPGHGEDQSSMDE
CCCCEEEECCCCCCCEEEEEEHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHH
TWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKE
CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCHHHHEEECCCCCHHH
EANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPQ
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHCCCCHHHHHHHHHHHHCCCHH
KMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKKMANLIPNSKCKLISA
HHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEE
TGHTIHVEDSDEFDTMILGLLKEEQND
CCCEEEECCCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
THYNYYEANVETNQVLVLLHGFLSDSRTYHNHIDKYTNICHVITIDLPGHGEDQSSMDE
CCCEEEECCCCCCCEEEEEEHHHCCCHHHHHHHHHHCCEEEEEEEECCCCCCCCCCHHH
TWNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILESTSPGIKE
CCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEEEEECCCCHHHHEEECCCCCHHH
EANQLERRLVDDARAKVLDIAGIELFVNDWEKLPLFQSQLELPVEIQHQIRQQRLSQSPQ
HHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHCCCHHHHCCCCHHHHHHHHHHHHCCCHH
KMAKALRDYGTGQMPNLWPRLKEIKVPTLILAGEYDEKFVQIAKKMANLIPNSKCKLISA
HHHHHHHHCCCCCCCCHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEE
TGHTIHVEDSDEFDTMILGLLKEEQND
CCCEEEECCCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8566759; 9387221; 9384377 [H]