| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
Click here to switch to the map view.
The map label for this gene is pgm
Identifier: 82750483
GI number: 82750483
Start: 803823
End: 805340
Strand: Direct
Name: pgm
Synonym: SAB0731
Alternate gene names: 82750483
Gene position: 803823-805340 (Clockwise)
Preceding gene: 82750482
Following gene: 82750484
Centisome position: 29.31
GC content: 36.36
Gene sequence:
>1518_bases ATGGCTAAGAAACCAACTGCGTTAATTATTTTAGATGGTTTTGCGAACCGCGAAAGCGAACATGGTAATGCGGTAAAATT AGCAAACAAGCCTAATTTTGATCGTTATTACAACAAATATCCAACGACTCAAATCGAAGCGAGTGGCTTAGATGTTGGAC TACCTGAAGGACAAATGGGTAACTCAGAAGTTGGTCATATGAATATCGGTGCAGGACGTATCGTTTATCAAAGTTTAACT CGAATCAATAAATCAATTGAAGACGGCGATTTCTTTGAAAATGATGTTTTAAATAATGCAATTGCACACGTGAATTCACA TGATTCAGCGTTACACATCTTTGGTTTATTGTCTGACGGTGGTGTACACAGTCATTACAAACATTTATTTGCTTTGTTAG AACTTGCTAAAAAACAAGGTGTTGAAAAAGTTTACGTACACGCATTTTTAGACGGTCGTGACGTAGATCAAAAATCCGCT TTGAAATACATCGAAGAGACTGAAGCTAAATTCAATGAATTAGGTATTGGTCAATTTGCATCTGTGTCTGGCCGTTATTA TGCAATGGACCGTGACAAACGTTGGGAACGTGAAGAAAAAGCTTACAATGCTATTCGTAACTTTGATGCCCCAACTTATG CAACTGCCAAAGAAGGTGTGGATGCAAGTTATAATGAAGGCTTAACTGACGAATTCGTAGTACCATTCATCGTTGAGAAT CAAAATGACGGTGTTAATGATGGAGATGCAGTGATCTTCTATAATTTCCGACCTGATAGAGCAGCACAATTATCGGAAAT TTTTGCGAACAGAGCATTCGAAGGCTTTAAAGTTGAACAAGTTAAAGATTTATTCTATGCAACATTCACTAAGTATAATG ACAATATCGATGCGACTATCGTTTTCGAAAAAGTCGATTTAAATAATACAATTGGTGAAATTGCACAAAATAACAATTTA ACTCAATTACGTATTGCAGAAACTGAAAAATATCCTCACGTTACTTACTTTATGAGTGGTGGACGTAATGAGGAATTTAA AGGTGAACGTCGTCGTTTGATTGATTCACCTAAAGTTGCAACGTATGACTTGAAACCAGAAATGAGTGCTTATGAAGTTA AAGATGCATTATTAGAAGAGTTAAATAAAGGTGACTTGGACTTAATTATTTTAAACTTTGCTAACCCTGATATGGTTGGA CATAGTGGTATGCTTGAGCCGACAATCAAAGCAATTGAAGCGGTTGATGAATGTTTAGGTGAAGTGGTTGATAAGATTTT AGACATGGACGGTTATGCAATTATTACTGCTGACCATGGTAACTCTGATCAAGTATTGACGGATGATGATCAACCAATGA CTACGCATACAACGAACCCAGTACCAGTGATTGTAACAAAAGAAGGCGTTACACTTAGAGAAACTGGTCGCTTAGGTGAC TTAGCACCTACATTATTAGATTTATTAAATGTAGAACAACCTGAAGACATGACAGGTGAATCTTTAATTAAACACTAA
Upstream 100 bases:
>100_bases AAGAATACATGGCACAAACTGATATTGATGGGGCATTAGTAGGTGGCGCATCACTTAAAGTTGAAGATTTCGTACAATTG TTAGAAGGTGCAAAATAATC
Downstream 100 bases:
>100_bases TATTGTAAAAGATGTTAAGTAAACGCTTAATGACACTTATTTTTTGAAAATAATAGTAATATCATTTTGTTAAATGAAAG AATAAAGCTATAATAATTAT
Product: phosphoglyceromutase
Products: NA
Alternate protein names: BPG-independent PGAM; Phosphoglyceromutase; iPGM [H]
Number of amino acids: Translated: 505; Mature: 504
Protein sequence:
>505_residues MAKKPTALIILDGFANRESEHGNAVKLANKPNFDRYYNKYPTTQIEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLT RINKSIEDGDFFENDVLNNAIAHVNSHDSALHIFGLLSDGGVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSA LKYIEETEAKFNELGIGQFASVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKEGVDASYNEGLTDEFVVPFIVEN QNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGFKVEQVKDLFYATFTKYNDNIDATIVFEKVDLNNTIGEIAQNNNL TQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVATYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVG HSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEGVTLRETGRLGD LAPTLLDLLNVEQPEDMTGESLIKH
Sequences:
>Translated_505_residues MAKKPTALIILDGFANRESEHGNAVKLANKPNFDRYYNKYPTTQIEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLT RINKSIEDGDFFENDVLNNAIAHVNSHDSALHIFGLLSDGGVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSA LKYIEETEAKFNELGIGQFASVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKEGVDASYNEGLTDEFVVPFIVEN QNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGFKVEQVKDLFYATFTKYNDNIDATIVFEKVDLNNTIGEIAQNNNL TQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVATYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVG HSGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEGVTLRETGRLGD LAPTLLDLLNVEQPEDMTGESLIKH >Mature_504_residues AKKPTALIILDGFANRESEHGNAVKLANKPNFDRYYNKYPTTQIEASGLDVGLPEGQMGNSEVGHMNIGAGRIVYQSLTR INKSIEDGDFFENDVLNNAIAHVNSHDSALHIFGLLSDGGVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSAL KYIEETEAKFNELGIGQFASVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKEGVDASYNEGLTDEFVVPFIVENQ NDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGFKVEQVKDLFYATFTKYNDNIDATIVFEKVDLNNTIGEIAQNNNLT QLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVATYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGH SGMLEPTIKAIEAVDECLGEVVDKILDMDGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEGVTLRETGRLGDL APTLLDLLNVEQPEDMTGESLIKH
Specific function: Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate [H]
COG id: COG0696
COG function: function code G; Phosphoglyceromutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BPG-independent phosphoglycerate mutase family [H]
Homologues:
Organism=Escherichia coli, GI1790041, Length=508, Percent_Identity=48.2283464566929, Blast_Score=474, Evalue=1e-135, Organism=Caenorhabditis elegans, GI32564249, Length=509, Percent_Identity=39.8821218074656, Blast_Score=373, Evalue=1e-103, Organism=Caenorhabditis elegans, GI17507741, Length=509, Percent_Identity=39.8821218074656, Blast_Score=373, Evalue=1e-103,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR011258 - InterPro: IPR006124 - InterPro: IPR005995 [H]
Pfam domain/function: PF06415 iPGM_N; PF01676 Metalloenzyme [H]
EC number: =5.4.2.1 [H]
Molecular weight: Translated: 56441; Mature: 56309
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKKPTALIILDGFANRESEHGNAVKLANKPNFDRYYNKYPTTQIEASGLDVGLPEGQMG CCCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCC NSEVGHMNIGAGRIVYQSLTRINKSIEDGDFFENDVLNNAIAHVNSHDSALHIFGLLSDG CCCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC GVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSALKYIEETEAKFNELGIGQFA CCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHH SVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKEGVDASYNEGLTDEFVVPFIVEN CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEC QNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGFKVEQVKDLFYATFTKYNDNIDATI CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEE VFEKVDLNNTIGEIAQNNNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA EEEEECCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEE TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLG EEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH EVVDKILDMDGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEGVTLRETGRLGD HHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCEECCCCCEEEEEECCCEEEECCCCCCC LAPTLLDLLNVEQPEDMTGESLIKH HHHHHHHHHCCCCCCCCCHHHHHCC >Mature Secondary Structure AKKPTALIILDGFANRESEHGNAVKLANKPNFDRYYNKYPTTQIEASGLDVGLPEGQMG CCCCCEEEEECCCCCCCCCCCCEEEECCCCCHHHHHCCCCCCEEECCCCCCCCCCCCCC NSEVGHMNIGAGRIVYQSLTRINKSIEDGDFFENDVLNNAIAHVNSHDSALHIFGLLSDG CCCCCEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEECCC GVHSHYKHLFALLELAKKQGVEKVYVHAFLDGRDVDQKSALKYIEETEAKFNELGIGQFA CCHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHH SVSGRYYAMDRDKRWEREEKAYNAIRNFDAPTYATAKEGVDASYNEGLTDEFVVPFIVEN CCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCCCCCEEEEEEEEC QNDGVNDGDAVIFYNFRPDRAAQLSEIFANRAFEGFKVEQVKDLFYATFTKYNDNIDATI CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEE VFEKVDLNNTIGEIAQNNNLTQLRIAETEKYPHVTYFMSGGRNEEFKGERRRLIDSPKVA EEEEECCCCHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCEE TYDLKPEMSAYEVKDALLEELNKGDLDLIILNFANPDMVGHSGMLEPTIKAIEAVDECLG EEECCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH EVVDKILDMDGYAIITADHGNSDQVLTDDDQPMTTHTTNPVPVIVTKEGVTLRETGRLGD HHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCEECCCCCEEEEEECCCEEEECCCCCCC LAPTLLDLLNVEQPEDMTGESLIKH HHHHHHHHHCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA