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The map label for this gene is sle1

Identifier: 82750172

GI number: 82750172

Start: 451931

End: 452938

Strand: Direct

Name: sle1

Synonym: SAB0414

Alternate gene names: 82750172

Gene position: 451931-452938 (Clockwise)

Preceding gene: 82750171

Following gene: 82750174

Centisome position: 16.48

GC content: 36.31

Gene sequence:

>1008_bases
GTGCAAAAAAAAGTAATTGCAGCTATTATTGGGACAAGCGCGATTAGCGCTGTTGCGGCAACTCAAGCAAATGCGGCTAC
AACTCACACAGTAAAACCGGGTGAATCAGTGTGGGCAATTTCAAATAAGTATGGGATTTCGATTGCTAAATTAAAGTCAT
TAAACAATTTAACATCTAATCTAATTTTCCCAAACCAAGTACTAAAAGTATCTGGCTCAAGTAATTCTACGAGTAATAGT
AGCCGTCCATCAACGAACTCAGGTGGCGGATCGTATTACACAGTACAAGCAGGTGACTCATTGTCATTAATCGCATCGAA
ATATGGTACAACTTACCAAAATATTATGCGTCTTAATGGTTTAAATAATTTCTTTATTTATCCAGGACAAAAATTAAAAG
TATCAGGTACTGCTAGCTCAAGTAACGCTGCGAGCAATAGTAGCCGTCCATCAACGAACTCAGGTGGCGGATCATACTAT
ACAGTACAAGCAGGTGACTCATTGTCATTAATCGCATCAAAATATGGTACAACTTATCAAAAAATTATGAGCTTAAATGG
CTTAAATAATTTCTTTATATATCCGGGTCAAAAATTAAAAGTAACTGGTAATGCAACATCTTCAAACTCAGCATCTGCAA
CAACTACGAATAGAGGTTACAATACACCAGTATTCAGTCATCAAAACTTATATACATGGGGTCAATGTACATATCATGTA
TTTAATCGTCGTGCTGAAATTGGTAAAGGTATTAGTACTTATTGGTGGAATGCTAATAACTGGGATAACGCAGCGGCAGC
AGATGGTTACACTATCGACAATAGACCTACTGTAGGTTCTATCGCTCAAACAGATGTAGGTTACTATGGTCATGTTATGT
TTGTAGAACGTGTAAATAACGATGGTAGTATTTTAGTTTCAGAAATGAACTATTCAGCTGCACCAGGTATTTTAACTTAC
AGAACGGTACCAGCTTACCAAGTAAATAATTATAGATATATTCACTAA

Upstream 100 bases:

>100_bases
ACATCAACCTATTATACATAATAAAATCGTATAATGATGTAGTATTCATAAATTCGGATAAAAGAATGTTAGGAAAGTTA
AGCAAGAGGAGGATTTTAAA

Downstream 100 bases:

>100_bases
AGTCTTACGTATATAAATATATATAATGAATTCCTATTACATTTCACAAGCTGAAAAGTTGGATTGAATCCTAAACTTTA
TGGCGGGGCTATCAAAGTCG

Product: autolysin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVSGSSNSTSNS
SRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYY
TVQAGDSLSLIASKYGTTYQKIMSLNGLNNFFIYPGQKLKVTGNATSSNSASATTTNRGYNTPVFSHQNLYTWGQCTYHV
FNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNNDGSILVSEMNYSAAPGILTY
RTVPAYQVNNYRYIH

Sequences:

>Translated_335_residues
MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVSGSSNSTSNS
SRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYY
TVQAGDSLSLIASKYGTTYQKIMSLNGLNNFFIYPGQKLKVTGNATSSNSASATTTNRGYNTPVFSHQNLYTWGQCTYHV
FNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNNDGSILVSEMNYSAAPGILTY
RTVPAYQVNNYRYIH
>Mature_335_residues
MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSNLIFPNQVLKVSGSSNSTSNS
SRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNGLNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYY
TVQAGDSLSLIASKYGTTYQKIMSLNGLNNFFIYPGQKLKVTGNATSSNSASATTTNRGYNTPVFSHQNLYTWGQCTYHV
FNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNNDGSILVSEMNYSAAPGILTY
RTVPAYQVNNYRYIH

Specific function: Peptidoglycan hydrolase involved in the splitting of the septum during cell division

COG id: COG1388

COG function: function code M; FOG: LysM repeat

Gene ontology:

Cell location: Secreted. Cell surface (By similarity)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 peptidase C51 domain

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): SLE1_STAAB (Q2YVT4)

Other databases:

- EMBL:   AJ938182
- RefSeq:   YP_415913.1
- ProteinModelPortal:   Q2YVT4
- STRING:   Q2YVT4
- EnsemblBacteria:   EBSTAT00000012105
- GeneID:   3792711
- GenomeReviews:   AJ938182_GR
- KEGG:   sab:SAB0414
- NMPDR:   fig|273036.3.peg.80
- eggNOG:   COG1388
- GeneTree:   EBGT00050000023682
- HOGENOM:   HBG697363
- OMA:   LTYRTIP
- ProtClustDB:   CLSK884669
- BioCyc:   SAUR273036:SAB0414-MONOMER
- GO:   GO:0019835
- GO:   GO:0009405
- InterPro:   IPR007921
- InterPro:   IPR018392
- InterPro:   IPR002482
- SMART:   SM00257

Pfam domain/function: PF05257 CHAP; PF01476 LysM

EC number: =3.5.1.28

Molecular weight: Translated: 35937; Mature: 35937

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50911 CHAP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSN
CCCEEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHHHHH
LIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNG
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCHHHHHHHHCC
LNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQ
CCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHCHHHH
KIMSLNGLNNFFIYPGQKLKVTGNATSSNSASATTTNRGYNTPVFSHQNLYTWGQCTYHV
HHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCEECCCCCCCCEECCCCEEECCCCCEEH
FNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNN
HHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHCCCCCCEEEEEEEEECC
DGSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
CCCEEEEECCCCCCCCEEEEEECCCEEECCEEEEC
>Mature Secondary Structure
MQKKVIAAIIGTSAISAVAATQANAATTHTVKPGESVWAISNKYGISIAKLKSLNNLTSN
CCCEEEEEEHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCEEHHHHHHHHHHHHH
LIFPNQVLKVSGSSNSTSNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQNIMRLNG
CCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHCCCHHHHHHHHCC
LNNFFIYPGQKLKVSGTASSSNAASNSSRPSTNSGGGSYYTVQAGDSLSLIASKYGTTYQ
CCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEHHHHHCHHHH
KIMSLNGLNNFFIYPGQKLKVTGNATSSNSASATTTNRGYNTPVFSHQNLYTWGQCTYHV
HHHHHCCCCCEEEECCCEEEEEECCCCCCCCCCEECCCCCCCCEECCCCEEECCCCCEEH
FNRRAEIGKGISTYWWNANNWDNAAAADGYTIDNRPTVGSIAQTDVGYYGHVMFVERVNN
HHHHHHHCCCCEEEEECCCCCCCCCCCCCEEECCCCCCCCHHHCCCCCCEEEEEEEEECC
DGSILVSEMNYSAAPGILTYRTVPAYQVNNYRYIH
CCCEEEEECCCCCCCCEEEEEECCCEEECCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA