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The map label for this gene is set3

Identifier: 82750142

GI number: 82750142

Start: 418346

End: 419044

Strand: Direct

Name: set3

Synonym: SAB0382

Alternate gene names: NA

Gene position: 418346-419044 (Clockwise)

Preceding gene: 82750141

Following gene: 82750143

Centisome position: 15.25

GC content: 28.76

Gene sequence:

>699_bases
ATGAAATTTACTGCATTAGCAAAAGCAACATTAGCATTAGGAATATTAACTACAGGTGTGTTTACAGCAGAAAGTAAAGC
TGTTCACGCGAAAGTAGAACTTGATGAGACACAATGCAAATATTATATAAATATGCTACATCAATACTATTCTGAAGAAA
GTTTTGAACCAACAAACATTAGTGTTAAAAGTGAAGATTACTATGGCTCTAACGTTTTAAACTTTAAACAACGAAATAAA
GCTTTTAAAGTATTTTTACTTGGTGACGATAAAAATAAATATAAAGAAAAAACACATGGCCTTGATGTCTTTGCAGTACC
TGAATTAATAGATATAAAAGGTGGCATATATAGCGTTGGCGGTATAACAAAGAAAAATGTGAGATCAGTGTTTGGATTTG
TAAGTAATCCAAGTCTACAAGTTAAAAAAGTTGATGCTAAAAATGGATTTTCGATAAACGAGTTGTTCTTTATTCAAAAG
GAAGAAGTATCATTGAAGGAACTGGACTTTAAAATAAGAAAACTCTTAATCGAAAAATATAGATTGTATAAAGGAACGTC
TGATAAAGGTAGAATTGTTATCAATATGAAAGACGAAAAGAAGCATGAAATTGATTTAAGTGAAAAATTAAGTTTTGAAC
GTATGTTTGATGTAATGGACAGTAAGAAAATTAAAAACATTGAAGTGAATTTAAATTAG

Upstream 100 bases:

>100_bases
CGTTAATGTCAGTCTGTTTTGATGCACCTTATAATAAAGACAGATAGTTCAAATTACGTAATAATAACAATCCAATATAT
CAAGATTGGAGCAAATAAAT

Downstream 100 bases:

>100_bases
TTCGAGTTAATAGCATAATAGCTTAAGAAGCGACTTAACGACAAAATGTGAATTGACATCCGTGTCCTTATATAAGGAAC
TATGTTAAATACATTACTGT

Product: superantigen-like protein

Products: NA

Alternate protein names: Superantigen-Like; Exotoxin; Exotoxin-Like Protein

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKFTALAKATLALGILTTGVFTAESKAVHAKVELDETQCKYYINMLHQYYSEESFEPTNISVKSEDYYGSNVLNFKQRNK
AFKVFLLGDDKNKYKEKTHGLDVFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKNGFSINELFFIQK
EEVSLKELDFKIRKLLIEKYRLYKGTSDKGRIVINMKDEKKHEIDLSEKLSFERMFDVMDSKKIKNIEVNLN

Sequences:

>Translated_232_residues
MKFTALAKATLALGILTTGVFTAESKAVHAKVELDETQCKYYINMLHQYYSEESFEPTNISVKSEDYYGSNVLNFKQRNK
AFKVFLLGDDKNKYKEKTHGLDVFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKNGFSINELFFIQK
EEVSLKELDFKIRKLLIEKYRLYKGTSDKGRIVINMKDEKKHEIDLSEKLSFERMFDVMDSKKIKNIEVNLN
>Mature_232_residues
MKFTALAKATLALGILTTGVFTAESKAVHAKVELDETQCKYYINMLHQYYSEESFEPTNISVKSEDYYGSNVLNFKQRNK
AFKVFLLGDDKNKYKEKTHGLDVFAVPELIDIKGGIYSVGGITKKNVRSVFGFVSNPSLQVKKVDAKNGFSINELFFIQK
EEVSLKELDFKIRKLLIEKYRLYKGTSDKGRIVINMKDEKKHEIDLSEKLSFERMFDVMDSKKIKNIEVNLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26639; Mature: 26639

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFTALAKATLALGILTTGVFTAESKAVHAKVELDETQCKYYINMLHQYYSEESFEPTNI
CCCHHHHHHHHHHHHHHHCEEECCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCEE
SVKSEDYYGSNVLNFKQRNKAFKVFLLGDDKNKYKEKTHGLDVFAVPELIDIKGGIYSVG
EEECCCCCCCCEECHHHCCCEEEEEEEECCCHHHHHHHCCCEEEECCCEEECCCCEEEEC
GITKKNVRSVFGFVSNPSLQVKKVDAKNGFSINELFFIQKEEVSLKELDFKIRKLLIEKY
CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
RLYKGTSDKGRIVINMKDEKKHEIDLSEKLSFERMFDVMDSKKIKNIEVNLN
HHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEC
>Mature Secondary Structure
MKFTALAKATLALGILTTGVFTAESKAVHAKVELDETQCKYYINMLHQYYSEESFEPTNI
CCCHHHHHHHHHHHHHHHCEEECCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCEE
SVKSEDYYGSNVLNFKQRNKAFKVFLLGDDKNKYKEKTHGLDVFAVPELIDIKGGIYSVG
EEECCCCCCCCEECHHHCCCEEEEEEEECCCHHHHHHHCCCEEEECCCEEECCCCEEEEC
GITKKNVRSVFGFVSNPSLQVKKVDAKNGFSINELFFIQKEEVSLKELDFKIRKLLIEKY
CCCHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
RLYKGTSDKGRIVINMKDEKKHEIDLSEKLSFERMFDVMDSKKIKNIEVNLN
HHHCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA