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The map label for this gene is ykuT [H]

Identifier: 82750073

GI number: 82750073

Start: 363353

End: 364234

Strand: Direct

Name: ykuT [H]

Synonym: SAB0312

Alternate gene names: 82750073

Gene position: 363353-364234 (Clockwise)

Preceding gene: 82750072

Following gene: 82750074

Centisome position: 13.25

GC content: 31.18

Gene sequence:

>882_bases
ATGGATCAAGTTATGAGTATTATTTCATCGCTATTCGAACCATTAACTAAAATTGAAACATATGAAAGTATTGCTACTAA
ATTAGCGATGATAATTATATATATTATCGTTGCATTAATCGTAATTAAAATACTAGATAAAATGATTGCCCAAGGATTTA
AAATACAAAACAAGAGTAAAAAGGGTAATAAAAAACGTTCCAAAACATTAATATCATTGGTGCAAAATGTTGTTAAATAT
ATCGTGTGGTTTATAGTTATCACTACCATTTTAAGTAAATTTGGCATTAGTGTTGAAGGGGTAATTGCCAGTGCTGGTGT
CGTAGGCTTAGCAGCAGGTTTTGGTGCTCAAACTATAGTTAAAGACGTAATTACAGGATTCTTTATTATATTTGAAAGCC
AATTTGATGTAGGTGATTATGTTAAGATAAATAACGGTGGTACAACTGTAGCAGAGGGAACAGTTAAATCAATTGGACTC
CGTTCAACACGCATTAATACAATATCTGGGGAACTTACAATCTTGCCAAATAGTAGTATGGGTGAAATAACGAATTACTC
AATTACGAATGGAACAGCAATTGTTAAAATTCCAGTATCTGTAGATGAAAATATTGATAATGTTGAGAAGAAATTAAACA
AATTATTTACATCTCTGCGTAGTAAATATTATTTATTTGTAAGTGATCCTGTTATGATTGGTATTGATGCCTTTGAAGAT
ACTAGAGTAATATTAAGGGTTTCAGCAGAAACTATACCAGGTGAAGGTTTCTCTGGTGCGCGTATTATTCGTAAAGAAGT
ACAAAAAATGTTTTTACAAGAAGGTATTAAGACACCACAACCAATAATGACACCTTTTAATCATAGTGAAAACGGTGTTT
AG

Upstream 100 bases:

>100_bases
ATCTATATTATTTGAAGATGATGCGACTTCAGTAGGTTGGAAGAATACAATAATATCAATAAAATTATTTGAGACTATAT
AGAAGGGAGTAACGCTAATT

Downstream 100 bases:

>100_bases
TAGTTTACAATACATGGAGGTCATATTTAATGGCGTCAAAATATGGAATAAATGATATAGTAGAAATGAAAAAACAACAT
GCGTGTGGAACCAATCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MDQVMSIISSLFEPLTKIETYESIATKLAMIIIYIIVALIVIKILDKMIAQGFKIQNKSKKGNKKRSKTLISLVQNVVKY
IVWFIVITTILSKFGISVEGVIASAGVVGLAAGFGAQTIVKDVITGFFIIFESQFDVGDYVKINNGGTTVAEGTVKSIGL
RSTRINTISGELTILPNSSMGEITNYSITNGTAIVKIPVSVDENIDNVEKKLNKLFTSLRSKYYLFVSDPVMIGIDAFED
TRVILRVSAETIPGEGFSGARIIRKEVQKMFLQEGIKTPQPIMTPFNHSENGV

Sequences:

>Translated_293_residues
MDQVMSIISSLFEPLTKIETYESIATKLAMIIIYIIVALIVIKILDKMIAQGFKIQNKSKKGNKKRSKTLISLVQNVVKY
IVWFIVITTILSKFGISVEGVIASAGVVGLAAGFGAQTIVKDVITGFFIIFESQFDVGDYVKINNGGTTVAEGTVKSIGL
RSTRINTISGELTILPNSSMGEITNYSITNGTAIVKIPVSVDENIDNVEKKLNKLFTSLRSKYYLFVSDPVMIGIDAFED
TRVILRVSAETIPGEGFSGARIIRKEVQKMFLQEGIKTPQPIMTPFNHSENGV
>Mature_293_residues
MDQVMSIISSLFEPLTKIETYESIATKLAMIIIYIIVALIVIKILDKMIAQGFKIQNKSKKGNKKRSKTLISLVQNVVKY
IVWFIVITTILSKFGISVEGVIASAGVVGLAAGFGAQTIVKDVITGFFIIFESQFDVGDYVKINNGGTTVAEGTVKSIGL
RSTRINTISGELTILPNSSMGEITNYSITNGTAIVKIPVSVDENIDNVEKKLNKLFTSLRSKYYLFVSDPVMIGIDAFED
TRVILRVSAETIPGEGFSGARIIRKEVQKMFLQEGIKTPQPIMTPFNHSENGV

Specific function: May play a role in resistance to osmotic downshock [H]

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=259, Percent_Identity=28.957528957529, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787591, Length=169, Percent_Identity=26.0355029585799, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 32111; Mature: 32111

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQVMSIISSLFEPLTKIETYESIATKLAMIIIYIIVALIVIKILDKMIAQGFKIQNKSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
KGNKKRSKTLISLVQNVVKYIVWFIVITTILSKFGISVEGVIASAGVVGLAAGFGAQTIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCHHHHH
KDVITGFFIIFESQFDVGDYVKINNGGTTVAEGTVKSIGLRSTRINTISGELTILPNSSM
HHHHHHHHHEEECCCCCCCEEEECCCCCEEECCHHHHCCCCCCEEEEECCEEEEECCCCC
GEITNYSITNGTAIVKIPVSVDENIDNVEKKLNKLFTSLRSKYYLFVSDPVMIGIDAFED
CCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCC
TRVILRVSAETIPGEGFSGARIIRKEVQKMFLQEGIKTPQPIMTPFNHSENGV
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MDQVMSIISSLFEPLTKIETYESIATKLAMIIIYIIVALIVIKILDKMIAQGFKIQNKSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
KGNKKRSKTLISLVQNVVKYIVWFIVITTILSKFGISVEGVIASAGVVGLAAGFGAQTIV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCHHHHH
KDVITGFFIIFESQFDVGDYVKINNGGTTVAEGTVKSIGLRSTRINTISGELTILPNSSM
HHHHHHHHHEEECCCCCCCEEEECCCCCEEECCHHHHCCCCCCEEEEECCEEEEECCCCC
GEITNYSITNGTAIVKIPVSVDENIDNVEKKLNKLFTSLRSKYYLFVSDPVMIGIDAFED
CCCCCEEEECCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCC
TRVILRVSAETIPGEGFSGARIIRKEVQKMFLQEGIKTPQPIMTPFNHSENGV
CEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]