| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is cycB [H]
Identifier: 82749921
GI number: 82749921
Start: 189710
End: 190981
Strand: Direct
Name: cycB [H]
Synonym: SAB0152
Alternate gene names: 82749921
Gene position: 189710-190981 (Clockwise)
Preceding gene: 82749920
Following gene: 82749922
Centisome position: 6.92
GC content: 34.12
Gene sequence:
>1272_bases ATGTCTAAAATTTTAAAATGTATCACGTTAGCCGTGGTAATGTTATTAATCGTAACTGCATGTGGCCCTAATCGTTCGAA AGAAGATATTGATAAAGCATTGAATAAAGATAATTCTAAAGACAAGCCTAACCAACTTACGATGTGGGTGGATGGCGACA AGCAAATGGCGTTTTATAAAAAAATGACGGATCAATATACTAAAAAAACTGGCATAAAAGTAAAGCTTGTAAATATTGGT CAAAATGATCAACTAGAAAATATTTCGCTAGACGCTCCTGCTGGAAAAGGTCCAGATATCTTTTTCTTAGCACATGATAA TACTGGAAGTGCCTATCTACAAGGCTTAGCTGATGAAATCAAATTATCAAAAGATGAGTTGAAAGGTTTCAATAAGCAAG CACTTAAAGCGATGAATTATGACAATAAGCAACTAGCATTGCCAGCTATCGTTGAAACAACCGCACTTTTTTATAATAAA AAATTAGTGAAAAATGCACCGCAAACGTTAGAAGAAGTTGAAGCTAATGCTGCCAAGCTAACTGATAGTAAAAAGAAACA ATACGGTATGTTATTTGATGCTAAAAATTTCTATTTTAATTATCCGTTTTTATTCGGCAATGATGATTATATTTTCAAGA AAAATGGCAGTGAATATGATATTCATCAGCTAGGACTAAATTCAAAACATGTCGTCAAGAATGCTGAACGATTACAAAAA TGGTACGACAAAGGGTATCTTCCTAAGGTAGCAACACATGATGTCATGATTGGTCTTTTTAAAGAAGGAAAAGTAGGACA ATTTGTCACTGGACCATGGAACATTAATGAATATCAAGAAACGTTTGGTAAAGATTTAGGAGTAACAACATTGCCTACAG ATGGTGGCAAACCTATGAAACCATTTCTCGGTGTACGTGGTTGGTATTTATCTGAATATAGTAAACATAAGTATTGGGCT AAAGATTTAATGCTGTATATCACTAGTAAAGATACATTACAAAAATATACAGATGAAATGAGCGAAATTACTGGACGTGT TGACGTGAAATCATCTAATCCAAATTTAAAAGTGTTTGAAAAGCAAGCACGTCATGCTGAACCGATGCCTAATATTCCTG AAATGCGACAAGTTTGGGAACCGATGGGCAATGCAAGCATATTTATCTCAAATGGTAAGAATCCTAAACAAGCGTTAGAT GAGGCGACGAATGATATAACGCAAAATATTAAGATTCTTCATCCGTCACAAAATGATAAGAAAGGAGATTAG
Upstream 100 bases:
>100_bases AGTGATGGCGAACGACAAGATTACACTAGCATTTGATATGAATAAGTTTCACTTTTTTGATGAAAAAACAGGAAATCGTA TCGTCTAAGGGGGAGTATTC
Downstream 100 bases:
>100_bases TTATGACGAAACGTAACCCTAAATTAGCGGCATTATTATCTGTTATACCTGGTTTGGGACAGTTTTATAATAAAAGACCC ATTAAAGGTACGATATTTTT
Product: maltose/maltodextrin transport system protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 423; Mature: 422
Protein sequence:
>423_residues MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTMWVDGDKQMAFYKKMTDQYTKKTGIKVKLVNIG QNDQLENISLDAPAGKGPDIFFLAHDNTGSAYLQGLADEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNK KLVKNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSEYDIHQLGLNSKHVVKNAERLQK WYDKGYLPKVATHDVMIGLFKEGKVGQFVTGPWNINEYQETFGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWA KDLMLYITSKDTLQKYTDEMSEITGRVDVKSSNPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNGKNPKQALD EATNDITQNIKILHPSQNDKKGD
Sequences:
>Translated_423_residues MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTMWVDGDKQMAFYKKMTDQYTKKTGIKVKLVNIG QNDQLENISLDAPAGKGPDIFFLAHDNTGSAYLQGLADEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNK KLVKNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSEYDIHQLGLNSKHVVKNAERLQK WYDKGYLPKVATHDVMIGLFKEGKVGQFVTGPWNINEYQETFGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWA KDLMLYITSKDTLQKYTDEMSEITGRVDVKSSNPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNGKNPKQALD EATNDITQNIKILHPSQNDKKGD >Mature_422_residues SKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTMWVDGDKQMAFYKKMTDQYTKKTGIKVKLVNIGQ NDQLENISLDAPAGKGPDIFFLAHDNTGSAYLQGLADEIKLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNKK LVKNAPQTLEEVEANAAKLTDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSEYDIHQLGLNSKHVVKNAERLQKW YDKGYLPKVATHDVMIGLFKEGKVGQFVTGPWNINEYQETFGKDLGVTTLPTDGGKPMKPFLGVRGWYLSEYSKHKYWAK DLMLYITSKDTLQKYTDEMSEITGRVDVKSSNPNLKVFEKQARHAEPMPNIPEMRQVWEPMGNASIFISNGKNPKQALDE ATNDITQNIKILHPSQNDKKGD
Specific function: Binding protein for cyclodextrin; involved in its cellular uptake. Interacts with all natural cyclodextrins:alpha, beta and gamma [H]
COG id: COG2182
COG function: function code G; Maltose-binding periplasmic proteins/domains
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
Organism=Escherichia coli, GI1790466, Length=383, Percent_Identity=29.7650130548303, Blast_Score=149, Evalue=5e-37,
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006060 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 47941; Mature: 47810
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTMWVDGDKQMAFYK CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH KMTDQYTKKTGIKVKLVNIGQNDQLENISLDAPAGKGPDIFFLAHDNTGSAYLQGLADEI HHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHH KLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNKKLVKNAPQTLEEVEANAAKL HCCHHHHCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSEYDIHQLGLNSKHVVKNAERLQK CCHHHHHHCEEEECCCCEEECCEEECCCCEEECCCCCCCCHHHCCCCCHHHHHHHHHHHH WYDKGYLPKVATHDVMIGLFKEGKVGQFVTGPWNINEYQETFGKDLGVTTLPTDGGKPMK HHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHCCCCCCEECCCCCCCCCC PFLGVRGWYLSEYSKHKYWAKDLMLYITSKDTLQKYTDEMSEITGRVDVKSSNPNLKVFE HHHCCCCHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHCCEEEEECCCCCCEEEH KQARHAEPMPNIPEMRQVWEPMGNASIFISNGKNPKQALDEATNDITQNIKILHPSQNDK HHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCC KGD CCC >Mature Secondary Structure SKILKCITLAVVMLLIVTACGPNRSKEDIDKALNKDNSKDKPNQLTMWVDGDKQMAFYK HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHH KMTDQYTKKTGIKVKLVNIGQNDQLENISLDAPAGKGPDIFFLAHDNTGSAYLQGLADEI HHHHHHHHHCCCEEEEEECCCCCCCCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHH KLSKDELKGFNKQALKAMNYDNKQLALPAIVETTALFYNKKLVKNAPQTLEEVEANAAKL HCCHHHHCCCCHHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH TDSKKKQYGMLFDAKNFYFNYPFLFGNDDYIFKKNGSEYDIHQLGLNSKHVVKNAERLQK CCHHHHHHCEEEECCCCEEECCEEECCCCEEECCCCCCCCHHHCCCCCHHHHHHHHHHHH WYDKGYLPKVATHDVMIGLFKEGKVGQFVTGPWNINEYQETFGKDLGVTTLPTDGGKPMK HHHCCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCHHHHHHCCCCCCEECCCCCCCCCC PFLGVRGWYLSEYSKHKYWAKDLMLYITSKDTLQKYTDEMSEITGRVDVKSSNPNLKVFE HHHCCCCHHHHHHHHHHHHHCEEEEEEECHHHHHHHHHHHHHHCCEEEEECCCCCCEEEH KQARHAEPMPNIPEMRQVWEPMGNASIFISNGKNPKQALDEATNDITQNIKILHPSQNDK HHHHCCCCCCCCHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCEEEECCCCCCC KGD CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]