| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82749916
Identifier: 82749916
GI number: 82749916
Start: 182447
End: 184222
Strand: Direct
Name: 82749916
Synonym: SAB0147
Alternate gene names: NA
Gene position: 182447-184222 (Clockwise)
Preceding gene: 82749915
Following gene: 82749917
Centisome position: 6.65
GC content: 33.56
Gene sequence:
>1776_bases GTGAAAAGAATCATTAGTATCGCAATTATAGTTTTAGCGTTGGTATTAAGTGGTTGTGGTGTCCCTACGAAATCAGAAGT GGCTCAAAAGTCATCGAAAGTTGAAGTGAAAGGCGAGCGACCAACGATACATTTCCTAGGACAAGCAAGTTATGAAAATG ATATGAATATCGTCAAAGATCAATTGGAAAATGCAGGATTTAACGTGAAGATGAATATCCAACCAGATTATGGTAGCTAT CGTACACAACGTCAAGCCGGCAATTATGATATCCAAATCGATGACTGGATGACAGTATTCGGTGACCCGAACTATGCTAT GACGGCATTATTTAGTTCTACAGGATCAAATAGTTTATTGAAAGATAAACATGTAGACCAGTTGTTAAATAAAGCTTCTA CTCAAAATGAAGCAGATGTTAAACAAACATATAAGCAAATTGAAGATGAAGTTGTATTTGATAAAGGGTATATGGCGCCT TTATATGGATCAAAAAAGAATTTAGTATATGACAATAAAGTGTTAGATAAAAATAGTGTTGGATTGCCAAATTCACGTGC ATTAATATGGCAACAATTTGATTACAACAATAGTAGAGAACGAGATACGCGGCCACTTGTGATGACACAACAAGATGGTG AAATTCCTACATTGGATCCAATACGTTCAATTGCGCCGTCAGTATATTCAATTAATATGAATATGTACACAAGGTTATTA TTATTAGATGAAAATGACCACTTAACAACGAAAGGTTCGTTAAGTCGTGATTATGCTGTGAATAAGGACAATAAAGCGTT TTATTTCTTGTTAAGAGATGATGATTATTTTGCGAAAGTGGTCAATGGACAAGCACGTAATACTGGAGAGCGTGTATCGG CTGAAGATGTTAAGTTTTCTTTAGATAGAGCACGTGATAAAAAGTCTGTGCCTAACAATAATACTTACAATATGCACAAG CATATAAATGACATCAAGATATTAAAAGATGAGGACATCGATCAGTTGCGTAAAGAGAAAGACAAGGACGATAATTCCAT CTATGATAAGTTGATTAAAGCTTATAACGTCAAATCGTTAACGACAGATGGTCATAAAGTAAATAATAAAGACGGTATTT ATCAAATTGTTAAAATTACGACAGATCAATCGATGCCTCGAGAGGTAAATTACTTAACACACTCTTCGGCAGGCATTTTA TCTAAAAAATTTGTTAATCAAGTAAATCAAGAATATCCAAAAGGATATGGGGATAGCAGTACAATTCCTGCAAATTCAGA TGGAAAAAATGCGCTTTATGCAAGTGGCGCATACATTATGACACAGAAAAATGCATATCAAGCAACGTTTCAACGTAATC CAGGATTCAACGAAACAGAAATAGGTAGTTATGGACCAGCTAAAATTAAAAATATTATATTGAAGTTTAATGGTGATCCG AATAATGCATTGTCAGAACTTAGAAATCATTCAATTGATATGTTGGCAGATGTGAATCAAAAACATTTTGATTTAATTAA GTCGGATAAAAATTTAAGCATTATTCGCAAAAATGGACGCAAGTCAGTCTTTTTAATGCTAAATATTAAAAAAGGTATAT TTAAGACGCATCCAAACTTGAGACAAGCAGTAGTTAATGCGATAGATCAGGATCAATTTATTAAGTTTTATCGTGGCGAT AAATTTAAAATTGCATCACCGATTACACCACTTGTCGATACTGGTAACAAGCAACGTCAAGATTTAGAAAAAGTAGAAAA AGCCATTAATCAATAA
Upstream 100 bases:
>100_bases GGTATTTGTATTATGTTTGTCGTTTTAGCATTTAATTTTATAGGTGATGCAGTGCGTGATGCACTAGATCCAAGAATTCA TTAAAAAGGTAGGGATAGAT
Downstream 100 bases:
>100_bases TGTTTTAAATATTTAACAGAAAGTAGGAGGATATAGTATGGTCATTAACTTAAATGACAAACAGACAAAAACATCTAAAG AAGGGTTAATTTCCGTATCA
Product: RGD-containing lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 591; Mature: 591
Protein sequence:
>591_residues MKRIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSY RTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAP LYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLL LLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHK HINDIKILKDEDIDQLRKEKDKDDNSIYDKLIKAYNVKSLTTDGHKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGIL SKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNETEIGSYGPAKIKNIILKFNGDP NNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGD KFKIASPITPLVDTGNKQRQDLEKVEKAINQ
Sequences:
>Translated_591_residues MKRIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSY RTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAP LYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLL LLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHK HINDIKILKDEDIDQLRKEKDKDDNSIYDKLIKAYNVKSLTTDGHKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGIL SKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNETEIGSYGPAKIKNIILKFNGDP NNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGD KFKIASPITPLVDTGNKQRQDLEKVEKAINQ >Mature_591_residues MKRIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKDQLENAGFNVKMNIQPDYGSY RTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLLKDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAP LYGSKKNLVYDNKVLDKNSVGLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLL LLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFSLDRARDKKSVPNNNTYNMHK HINDIKILKDEDIDQLRKEKDKDDNSIYDKLIKAYNVKSLTTDGHKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGIL SKKFVNQVNQEYPKGYGDSSTIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNETEIGSYGPAKIKNIILKFNGDP NNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNLRQAVVNAIDQDQFIKFYRGD KFKIASPITPLVDTGNKQRQDLEKVEKAINQ
Specific function: Unknown
COG id: COG0747
COG function: function code E; ABC-type dipeptide transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67063; Mature: 67063
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKD CHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCEEEEEECCCCCCCHHHHHH QLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLL HHHCCCCEEEEEECCCCCCHHHHHCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCHH KDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCCCCCCC GLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCEEEEECCEEEEEE LLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFS EEECCCCEEECCCCCCCCEECCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHH LDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDNSIYDKLIKAYNVKSL HHHHHHHCCCCCCCCEEHHHCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCEE TTDGHKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSS CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCC TIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNETEIGSYGPAKIKNIILKFNGDP CCCCCCCCCCEEEECCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHEEEEEEEECCCC NNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNL CHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHCCCHH RQAVVNAIDQDQFIKFYRGDKFKIASPITPLVDTGNKQRQDLEKVEKAINQ HHHHHHHHCHHHHHHHHCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure MKRIISIAIIVLALVLSGCGVPTKSEVAQKSSKVEVKGERPTIHFLGQASYENDMNIVKD CHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCEEEECCCCEEEEEECCCCCCCHHHHHH QLENAGFNVKMNIQPDYGSYRTQRQAGNYDIQIDDWMTVFGDPNYAMTALFSSTGSNSLL HHHCCCCEEEEEECCCCCCHHHHHCCCCEEEEECCEEEEECCCCCEEEEEECCCCCCCHH KDKHVDQLLNKASTQNEADVKQTYKQIEDEVVFDKGYMAPLYGSKKNLVYDNKVLDKNSV HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCCCCCCC GLPNSRALIWQQFDYNNSRERDTRPLVMTQQDGEIPTLDPIRSIAPSVYSINMNMYTRLL CCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHCCCEEEEECCEEEEEE LLDENDHLTTKGSLSRDYAVNKDNKAFYFLLRDDDYFAKVVNGQARNTGERVSAEDVKFS EEECCCCEEECCCCCCCCEECCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCHHHHHHH LDRARDKKSVPNNNTYNMHKHINDIKILKDEDIDQLRKEKDKDDNSIYDKLIKAYNVKSL HHHHHHHCCCCCCCCEEHHHCCCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCEE TTDGHKVNNKDGIYQIVKITTDQSMPREVNYLTHSSAGILSKKFVNQVNQEYPKGYGDSS CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHEECCCCCHHHHHHHHHHHHHCCCCCCCCC TIPANSDGKNALYASGAYIMTQKNAYQATFQRNPGFNETEIGSYGPAKIKNIILKFNGDP CCCCCCCCCCEEEECCEEEEEECCCEEEEECCCCCCCCCCCCCCCHHHEEEEEEEECCCC NNALSELRNHSIDMLADVNQKHFDLIKSDKNLSIIRKNGRKSVFLMLNIKKGIFKTHPNL CHHHHHHHHCCCHHHHHCCHHHHHHHCCCCCEEEEEECCCCEEEEEEEECCCHHHCCCHH RQAVVNAIDQDQFIKFYRGDKFKIASPITPLVDTGNKQRQDLEKVEKAINQ HHHHHHHHCHHHHHHHHCCCCEEECCCCCHHHCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA