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The map label for this gene is dppC [H]

Identifier: 82749915

GI number: 82749915

Start: 181267

End: 182430

Strand: Direct

Name: dppC [H]

Synonym: SAB0146

Alternate gene names: 82749915

Gene position: 181267-182430 (Clockwise)

Preceding gene: 82749914

Following gene: 82749916

Centisome position: 6.61

GC content: 34.11

Gene sequence:

>1164_bases
ATGGTAAAACTTACAACAAAGATAGCTTCCTTAAAACTATTCGCAAGTTATGCTATTGCAACTTATATTTTAGTTATATT
AACGAGTGCATTAAATCTTTTTAAAGGTTATGTGGCCGATACGTTCTATATTGCTGAAACATTGCTAATCGTTTTAACCA
TCATTTTAATTATCATTTTAACAACGGAACAAACATGGAAGCATCATGACCTATGGCGACGTATCGTCGAAGTGTTGTTA
TTGTTGATGACATTAACAGGCAACGTATTTACATTATTAATGTTTGTAAGTATTAGACGTTACCAACGTACATCGCAAAT
ACATAGTTATAACGGGTGGGAATCGTTTATACGAAAAACTACTAGACATCGTATTGCGATTATCGGGTTACTTATTTTAG
TCTTCATGCTGACATTATCAATTGTGTCACAATTTACATTTGATACGACATTGGCTACTAAAAATCAGTTCAATGCACTG
TTACATGGACCGAGTTTAACCTATCCGTTTGGTACTGATGATTTCGGTAGAGACTTATTTACACGCGTAGTTGTCGGAAC
GAAACTGACATTTTCAATTTCAATTATTTCAGTAGTTATTGCAGTTATTTTTGGTGTGTTACTAGGCACTATCGGAGGTT
ATTTTAATCATATTGATAATTTAATAATGCGAATTTTAGATGTAGTTTTTGCAATTCCATCATTATTGTTAGCGGTGGCA
ATTATTGCATCATTTGGAGCAAGTATTCCAAATTTAATTATTGCTTTAAGTATCGGTAATATACCATCATTTGCACGGAC
AATGCGTGCCAGTGTTTTAGAAATTAAACGCATGGAATATGTAGATGCAGCACGTATCACTGGTGAAAACACTTGGAATA
TCATATGGCGTTATATTTTACCGAATGCGATTGCGCCTATGATTGTACGTTTTTCATTAAATATAGGTGTGGTTGTATTA
ACAACAAGTAGTTTAAGTTTCCTAGGACTTGGTGTTGCACCTGATGTAGCTGAATGGGGCAACATTTTACGTACCGGTAG
TAACTACTTGGAAACGCACAGTAATTTAGCTATTGTACCTGGTATTTGTATTATGTTTGTCGTTTTAGCATTTAATTTTA
TAGGTGATGCAGTGCGTGATGCACTAGATCCAAGAATTCATTAA

Upstream 100 bases:

>100_bases
TATCAATTGTAATATCTTTAGCAAACTTAATTATTGATATATTTTATGCTTTAATCGATCCAAAATTACGTAGTGAAATT
AACGAAAGGAAGTGAGGCAT

Downstream 100 bases:

>100_bases
AAAGGTAGGGATAGATGTGAAAAGAATCATTAGTATCGCAATTATAGTTTTAGCGTTGGTATTAAGTGGTTGTGGTGTCC
CTACGAAATCAGAAGTGGCT

Product: oligopeptide ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 387

Protein sequence:

>387_residues
MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIILTTEQTWKHHDLWRRIVEVLL
LLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVFMLTLSIVSQFTFDTTLATKNQFNAL
LHGPSLTYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIGGYFNHIDNLIMRILDVVFAIPSLLLAVA
IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVL
TTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGICIMFVVLAFNFIGDAVRDALDPRIH

Sequences:

>Translated_387_residues
MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIILTTEQTWKHHDLWRRIVEVLL
LLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVFMLTLSIVSQFTFDTTLATKNQFNAL
LHGPSLTYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIGGYFNHIDNLIMRILDVVFAIPSLLLAVA
IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVL
TTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGICIMFVVLAFNFIGDAVRDALDPRIH
>Mature_387_residues
MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIILTTEQTWKHHDLWRRIVEVLL
LLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKTTRHRIAIIGLLILVFMLTLSIVSQFTFDTTLATKNQFNAL
LHGPSLTYPFGTDDFGRDLFTRVVVGTKLTFSISIISVVIAVIFGVLLGTIGGYFNHIDNLIMRILDVVFAIPSLLLAVA
IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYILPNAIAPMIVRFSLNIGVVVL
TTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVPGICIMFVVLAFNFIGDAVRDALDPRIH

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=276, Percent_Identity=37.3188405797101, Blast_Score=211, Evalue=6e-56,
Organism=Escherichia coli, GI1787760, Length=260, Percent_Identity=38.0769230769231, Blast_Score=177, Evalue=9e-46,
Organism=Escherichia coli, GI1789964, Length=231, Percent_Identity=40.6926406926407, Blast_Score=151, Evalue=7e-38,
Organism=Escherichia coli, GI1787498, Length=296, Percent_Identity=30.0675675675676, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1789889, Length=227, Percent_Identity=29.9559471365639, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI1787549, Length=214, Percent_Identity=33.1775700934579, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788505, Length=225, Percent_Identity=29.7777777777778, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 43090; Mature: 43090

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIIL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TRHRIAIIGLLILVFMLTLSIVSQFTFDTTLATKNQFNALLHGPSLTYPFGTDDFGRDLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
TRVVVGTKLTFSISIISVVIAVIFGVLLGTIGGYFNHIDNLIMRILDVVFAIPSLLLAVA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYIL
HHHHHCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVP
HHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHH
GICIMFVVLAFNFIGDAVRDALDPRIH
HHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MVKLTTKIASLKLFASYAIATYILVILTSALNLFKGYVADTFYIAETLLIVLTIILIIIL
CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TTEQTWKHHDLWRRIVEVLLLLMTLTGNVFTLLMFVSIRRYQRTSQIHSYNGWESFIRKT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
TRHRIAIIGLLILVFMLTLSIVSQFTFDTTLATKNQFNALLHGPSLTYPFGTDDFGRDLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
TRVVVGTKLTFSISIISVVIAVIFGVLLGTIGGYFNHIDNLIMRILDVVFAIPSLLLAVA
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIASFGASIPNLIIALSIGNIPSFARTMRASVLEIKRMEYVDAARITGENTWNIIWRYIL
HHHHHCCCCHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
PNAIAPMIVRFSLNIGVVVLTTSSLSFLGLGVAPDVAEWGNILRTGSNYLETHSNLAIVP
HHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCCCHHHHHHHHHCCCHHHHHCCCCCHHH
GICIMFVVLAFNFIGDAVRDALDPRIH
HHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]