| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is yfeV [C]
Identifier: 82749902
GI number: 82749902
Start: 164308
End: 165762
Strand: Direct
Name: yfeV [C]
Synonym: SAB0132
Alternate gene names: 82749902
Gene position: 164308-165762 (Clockwise)
Preceding gene: 82749901
Following gene: 82749903
Centisome position: 5.99
GC content: 37.94
Gene sequence:
>1455_bases ATGACCAAAGAACAACAACTTGCAGAACGAATTATTGCTGCAGTAGGTGGTATGGATAATATAGATAGTGTCATGAACTG TATGACACGTGTGCGTATTAAAGTATTAGATGAAAATAAAGTAGATGACCAAGAACTAAGGCACATTGATGGTGTCATGG GTGTTATACACGATGAACGCATTCAAGTTGTGGTTGGACCTGGCACAGTCAATAAAGTGGCTAATCATATGGCGGAATTA AGTGGTGTTAAACTAGGTGACCCAATACCACACAATCACAATGATAGTGAAAAAATGGACTATAAATCATATGCAGCTGA TAAAGCAAAGGCGAATAAAGAAGCACATAAAGCAAAACAAAAGAATGGTAAGTTGAATAAAGTATTGAAATCAATTGCCA ATATCTTTATACCGTTGATTCCTGCATTTATTGGAGCTGGATTAATTGGTGGTATTGCAGCAGTACTGAGTAACTTAATG GTGGCAGGCTATATTTCAGGTGCTTGGATTACGCAACTTATAACAGTATTTAATGTCATTAAAGACGGTATGTTAGCATA CTTAGCTATTTTCACTGGTATTAATGCGGCTAAAGAATTTGGTGCGACACCAGGACTTGGTGGCGTGATTGGTGGTACAA CGTTATTAACGGGTATTGCTGGTAAAAATATTTTAATGAATGTCTTCACTGGAGAACCATTGCAACCTGGACAAGGTGGG ATTATTGGCGTTATTTTTGCCGTTTGGATTTTAAGTATTGTCGAAAAGAGATTGCATAAAATTGTGCCAAATGCGATTGA TATTATTGTAACGCCGGCTATTGCATTGTTGATTGTAGGACTATTAACTATCTTTATCTTTATGCCATTAGCAGGTTTTG TTTCAGACAGTTTAGTTTCAGTAGTTAACGGAATTATTAGTATTGGTGGCGTATTTAGTGGATTTATCATTGGTGCAAGC TTCCTACCGTTAGTTATGTTAGGACTTCATCATATTTTTACGCCAATTCATATAGAAATGATTAACCAATCTGGTGCTAC TTACTTATTGCCAATAGCAGCGATGGCTGGTGCTGGACAAGTAGGTGCCGCATTAGCACTTTGGGTAAGATGTAAACGCA ACACAACATTACGTAATACTTTAAAAGGTGCATTGCCAGTTGGTTTCCTAGGTATTGGAGAACCATTAATCTATGGTGTG ACTTTGCCATTAGGTCGACCTTTCTTAACTGCTTGTATTGGCGGTGGTATTGGTGGCGCTGTAATAGGTGGAATTGGACA TATTGGTGCCAAAGCAATAGGCCCAAGTGGTGTGTCACTATTACCATTAATCTCAGATAATATGTATTTAGGTTATATTG CAGGATTACTTACTGCGTATGCTGGTGGATTCGTTTGTACATATTTATTTGGAACGACAAAGGCGATGCGACAGACAGAT TTGTTGGGTGATTAA
Upstream 100 bases:
>100_bases TGTGTGGCATTTCTAAGGAAGAAGCAACAAGACGGTTATTAAACAATGGTGACATTGTTAAACGAGCAATCAGAGATAGA CAACCTTAGGAGGGATTTAA
Downstream 100 bases:
>100_bases TGATGACAAATATTTTATATCGCATTGATAAGCAGTTGAGTGATTTTACGAAGACAGAAAAGATAATCGCTGATTACATT TTAAAGAATCCACATAAAAT
Product: PTS system sucrose-specific IIBC component
Products: NA
Alternate protein names: Phosphotransferase enzyme IIB component; PTS system EIIB component; Permease IIC component; PTS system EIIC component [H]
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQELRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAEL SGVKLGDPIPHNHNDSEKMDYKSYAADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLM VAGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGKNILMNVFTGEPLQPGQGG IIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPAIALLIVGLLTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGAS FLPLVMLGLHHIFTPIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYGV TLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLTAYAGGFVCTYLFGTTKAMRQTD LLGD
Sequences:
>Translated_484_residues MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQELRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAEL SGVKLGDPIPHNHNDSEKMDYKSYAADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLM VAGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGKNILMNVFTGEPLQPGQGG IIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPAIALLIVGLLTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGAS FLPLVMLGLHHIFTPIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYGV TLPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLTAYAGGFVCTYLFGTTKAMRQTD LLGD >Mature_483_residues TKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQELRHIDGVMGVIHDERIQVVVGPGTVNKVANHMAELS GVKLGDPIPHNHNDSEKMDYKSYAADKAKANKEAHKAKQKNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLMV AGYISGAWITQLITVFNVIKDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGKNILMNVFTGEPLQPGQGGI IGVIFAVWILSIVEKRLHKIVPNAIDIIVTPAIALLIVGLLTIFIFMPLAGFVSDSLVSVVNGIISIGGVFSGFIIGASF LPLVMLGLHHIFTPIHIEMINQSGATYLLPIAAMAGAGQVGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYGVT LPLGRPFLTACIGGGIGGAVIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLTAYAGGFVCTYLFGTTKAMRQTDL LGD
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane [H]
COG id: COG1263
COG function: function code G; Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIC type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1788769, Length=489, Percent_Identity=37.2188139059305, Blast_Score=258, Evalue=6e-70, Organism=Escherichia coli, GI1790159, Length=432, Percent_Identity=29.3981481481481, Blast_Score=168, Evalue=9e-43, Organism=Escherichia coli, GI48994906, Length=432, Percent_Identity=29.1666666666667, Blast_Score=138, Evalue=8e-34, Organism=Escherichia coli, GI2367362, Length=458, Percent_Identity=26.8558951965066, Blast_Score=123, Evalue=2e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018113 - InterPro: IPR001996 - InterPro: IPR003352 - InterPro: IPR013013 [H]
Pfam domain/function: PF00367 PTS_EIIB; PF02378 PTS_EIIC [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 50643; Mature: 50512
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: PS01035 PTS_EIIB_TYPE_1_CYS ; PS51098 PTS_EIIB_TYPE_1 ; PS51103 PTS_EIIC_TYPE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQELRHIDGVMGVIHDER CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHEECCC IQVVVGPGTVNKVANHMAELSGVKLGDPIPHNHNDSEKMDYKSYAADKAKANKEAHKAKQ EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLMVAGYISGAWITQLITVFNVI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGKNILMNVFTGEPLQPGQGG HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC IIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPAIALLIVGLLTIFIFMPLAGFVSDSLVS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFTPIHIEMINQSGATYLLPIAAMAGAGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHCCCCH VGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYGVTLPLGRPFLTACIGGGIGGA HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHCCCCHHHEEEECCCCCHHHHHHHCCCHHHH VIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLTAYAGGFVCTYLFGTTKAMRQTD HHHHHHHHCCCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGD CCCC >Mature Secondary Structure TKEQQLAERIIAAVGGMDNIDSVMNCMTRVRIKVLDENKVDDQELRHIDGVMGVIHDER CCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHEECCC IQVVVGPGTVNKVANHMAELSGVKLGDPIPHNHNDSEKMDYKSYAADKAKANKEAHKAKQ EEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KNGKLNKVLKSIANIFIPLIPAFIGAGLIGGIAAVLSNLMVAGYISGAWITQLITVFNVI HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDGMLAYLAIFTGINAAKEFGATPGLGGVIGGTTLLTGIAGKNILMNVFTGEPLQPGQGG HHHHHHHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC IIGVIFAVWILSIVEKRLHKIVPNAIDIIVTPAIALLIVGLLTIFIFMPLAGFVSDSLVS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVNGIISIGGVFSGFIIGASFLPLVMLGLHHIFTPIHIEMINQSGATYLLPIAAMAGAGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEHHHHHHCCCCH VGAALALWVRCKRNTTLRNTLKGALPVGFLGIGEPLIYGVTLPLGRPFLTACIGGGIGGA HHHHHHHHHHHCCCCHHHHHHHHCCCCCHHCCCCHHHEEEECCCCCHHHHHHHCCCHHHH VIGGIGHIGAKAIGPSGVSLLPLISDNMYLGYIAGLLTAYAGGFVCTYLFGTTKAMRQTD HHHHHHHHCCCCCCCCCCEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLGD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA