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The map label for this gene is yycH

Identifier: 82749797

GI number: 82749797

Start: 27683

End: 29026

Strand: Direct

Name: yycH

Synonym: SAB0020

Alternate gene names: NA

Gene position: 27683-29026 (Clockwise)

Preceding gene: 82749796

Following gene: 82749798

Centisome position: 1.01

GC content: 35.27

Gene sequence:

>1344_bases
GTGATTGGGATGAATAATAAGGAACATATTAAATCTGTCATTTTAGCACTACTCGTCTTGATGAGTGTCGTATTGACATA
TATGGTATGGAACTTTTCTCCTGATATTGCAAATGTCGACAATACAGATAGTAAGAAGAGTGAAACGAAACCTTTAACGA
CACCTATGACAGCCAAAATGGATACAACTATTACGCCATTTCAGATTATTCATTCGAAAAATGATCATCCAGAAGGTACG
ATCGCGACGGTTTCTAATGTGAATAAGCTGACGAAACCTTTAAAAAATAAAGAAGTGAAGTCCGTGGAGCATGTTCGTCG
TGATCATAACTTGATGATTCCTGATTTGAGCAGTGATTTTACATTATTCGATTTTACGTATGATTTACCGTTATCAACAT
ATCTTGGCCAAGTACTGAACATGAATGCGAAAGTACCAAATCATTTCAATTTCAATCGTTTGGTCATAGATCATGATGCT
GATGATAATATCGTGCTTTATGCTATAAGCAAAGATCGCCACGATTACGTAAAATTAACAACTACAACGAAAAATGATCA
TTTTTTAGATGCATTAGCAGCAGTGAAAAAAGATATGCAACCATACACAGATATCATCACAAACAAAGATACAATTGATC
GTACGACGCATGTTTTTGCACCAAGTAAACCTGAGAAGTTAAAAACATATCGCATGGTATTTAACACGATTAGTGTTGAG
AAAATGAATGCTATACTATTTGACGATTCAACCATCGTTCGTAGTTCAAAGAGTGGTGTTACAACCTACAACAATAATAC
AGGTGTCGCAAACTATAAAGATAAAAATGAAAAATATCATTATAAAAACTTGTCCGAAGATGAAGCAAGTTCCAGCAAAA
TGGAAGAAACGATTCCAGGAACCTTTGATTTTATTAATGGTCATGGTGGTTTCTTAAACGAAGACTTCAGATTGTTTAGT
ACGAATAATCAGTCAGGCGAGCTAACATATCAACGTTTCCTTAATGGTTATCCAACGTTTAATAAAGAAGGCTCTAATCA
AATTCAAGTCACTTGGGGTGAAAAAGGCGCCTTTGATTATCGTCGTTCGTTATTGCGCACCGATGTTGTTTTAAATAGTG
AGGATAATAAAACATTGCCGAAATTAGAGTCTGTACGTTCAAGCTTAGCGAACAATAGTGATATTAATTTTGAAAAAGTA
ACAAACATCGCTATCGGTTACGAAATGCAGGATAACTCAGATCATAATCACATTGAAGTGCAGATTAACAGTGAACTCGT
ACCGCGTTGGTATGTAGAATATGATGGCGAATGGTATGTTTATAACGATGGGAGGCTTGAATAA

Upstream 100 bases:

>100_bases
GAGATTGTGGAAGCTCACAATGGTCGTATTTGGGCAAACAGTGTAGAAGGTCAAGGTACATCTATCTTTATCACACTTCC
ATGTGAAGTCATTGAAGACG

Downstream 100 bases:

>100_bases
ATGAACTGGAAACTTACAAAGACACTTTTCATTTTCGTGTTTATTCTTGTCAACATCGTGTTAGTATCGATTTATGTTAA
TAAAGTCAATCGCTCACACA

Product: hypothetical protein

Products: NA

Alternate protein names: YycH Family Protein; Two-Component System YycF/YycG Regulatory Protein; Regulator Of WalKR; Secreted Protein

Number of amino acids: Translated: 447; Mature: 447

Protein sequence:

>447_residues
MIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGT
IATVSNVNKLTKPLKNKEVKSVEHVRRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDA
DDNIVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVE
KMNAILFDDSTIVRSSKSGVTTYNNNTGVANYKDKNEKYHYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFS
TNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGAFDYRRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDINFEKV
TNIAIGYEMQDNSDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE

Sequences:

>Translated_447_residues
MIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGT
IATVSNVNKLTKPLKNKEVKSVEHVRRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDA
DDNIVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVE
KMNAILFDDSTIVRSSKSGVTTYNNNTGVANYKDKNEKYHYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFS
TNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGAFDYRRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDINFEKV
TNIAIGYEMQDNSDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE
>Mature_447_residues
MIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKMDTTITPFQIIHSKNDHPEGT
IATVSNVNKLTKPLKNKEVKSVEHVRRDHNLMIPDLSSDFTLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDA
DDNIVLYAISKDRHDYVKLTTTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVE
KMNAILFDDSTIVRSSKSGVTTYNNNTGVANYKDKNEKYHYKNLSEDEASSSKMEETIPGTFDFINGHGGFLNEDFRLFS
TNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGAFDYRRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDINFEKV
TNIAIGYEMQDNSDHNHIEVQINSELVPRWYVEYDGEWYVYNDGRLE

Specific function: Unknown

COG id: COG4863

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51188; Mature: 51188

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHVRRDHNLMIPDLSSDF
CCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCE
TLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDNIVLYAISKDRHDYVKLT
EEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEE
TTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVE
EECCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHH
KMNAILFDDSTIVRSSKSGVTTYNNNTGVANYKDKNEKYHYKNLSEDEASSSKMEETIPG
HEEEEEECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
TFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGAFDY
CEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHH
RRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDINFEKVTNIAIGYEMQDNSDHNHIEV
HHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHEEEEEEEEEECCCCCCCEEEE
QINSELVPRWYVEYDGEWYVYNDGRLE
EECCCCCCEEEEEECCEEEEECCCCCC
>Mature Secondary Structure
MIGMNNKEHIKSVILALLVLMSVVLTYMVWNFSPDIANVDNTDSKKSETKPLTTPMTAKM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTTITPFQIIHSKNDHPEGTIATVSNVNKLTKPLKNKEVKSVEHVRRDHNLMIPDLSSDF
CCCCCCEEEEECCCCCCCCCEEEHHHHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCE
TLFDFTYDLPLSTYLGQVLNMNAKVPNHFNFNRLVIDHDADDNIVLYAISKDRHDYVKLT
EEEEEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCEEEEE
TTTKNDHFLDALAAVKKDMQPYTDIITNKDTIDRTTHVFAPSKPEKLKTYRMVFNTISVE
EECCCCHHHHHHHHHHHCCCHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCHH
KMNAILFDDSTIVRSSKSGVTTYNNNTGVANYKDKNEKYHYKNLSEDEASSSKMEETIPG
HEEEEEECCCCEEECCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC
TFDFINGHGGFLNEDFRLFSTNNQSGELTYQRFLNGYPTFNKEGSNQIQVTWGEKGAFDY
CEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCEEEEEECCCCCHHH
RRSLLRTDVVLNSEDNKTLPKLESVRSSLANNSDINFEKVTNIAIGYEMQDNSDHNHIEV
HHHHHHHHEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHEEEEEEEEEECCCCCCCEEEE
QINSELVPRWYVEYDGEWYVYNDGRLE
EECCCCCCEEEEEECCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA