| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is yeeZ [C]
Identifier: 82703798
GI number: 82703798
Start: 3084965
End: 3085873
Strand: Reverse
Name: yeeZ [C]
Synonym: Nmul_A2685
Alternate gene names: 82703798
Gene position: 3085873-3084965 (Counterclockwise)
Preceding gene: 82703800
Following gene: 82703797
Centisome position: 96.91
GC content: 57.87
Gene sequence:
>909_bases ATGTCGGTAACTAACATGAAAACGATAAAGCGAACACTCTTGATCGTCGGTTGCGGTGATATCGCCCTGCGAGCGGCTCC CCTGCTGCTAACGCATTACCGATTGCTGGGCCTGTACCGGAAGCCCGAGCAATGTGCTTCGCTGCGTTCGCTAGGGATTA CGCCTGTATCCGGCGATCTCGACATACCCGACAGCCTTGATAAACTTGCAGGTGCGGCAGATGCCGTTTTACATCTTGCT CCGCCTCCCGCGCGCGGTCGCACTGATACCCGTACCGCGCATCTTCTGGCGGCCCTGACGAGGCGACCAAAAATGAAGCG CTCAATGTTACCACAACGCTTTATCTACATCAGCACCAGCGGGGTATATGGGGATTGCAAGGGAGCTCTGGTAAACGAGA CGCGGGCGATCAATCCTCTGACGGAACGTGCAGTGCGCCGGGCGGATGCGGAAAGGCGTGTTCGCCATTGGGGACTGCGC AACGGTGTGAATGTTTCGATTCTTCGTGTACCCGGGATTTACGCCGGCGATCGCCTGCCGCTCGCACGCCTGCGTGAGGG GGCGCCAGTGCTGGCGTCGGAAGACGACGGTTATACCAATCATATTCATGCGGACGATCTTGTGCGCATCGTTGTTGCTG CGCTCCGATATGCGCGACCAGGAAGGGTTTACCATGCGTGCGATGATTCAAACCTGAAAATGGGCGAATATTTCGATCTC GTAGCGGATAGATTTGCTTTGCCGCGGCCTTCGCGCGTTCCTCGTGCCGAAGCAGAAGGCCGCATCGCACCCGGCATGCT CTCATTCATGCAGGAGTCGCGACGACTGACCAATATGCGGATCAAGCAGGAGTTGCGCGTACATCTGCGCTATCCCACTG TTGCGGAGTGCCTGGGGGCGGCGGGATAG
Upstream 100 bases:
>100_bases TCGCCAGGCTGGGCGAAAAACCTGTGTCCGCTCGGCTGGATAGTAATTTGATGAGACATCTGATTACGATTACGGATGAG CCAGCAAAAATAAAAATGGA
Downstream 100 bases:
>100_bases ACCGTAAAACAGGTAAAATAGGTCCATTTTCGATGGAAGCAAGCAGATGTCCCAACCGCTCCAACCCTACACCGCTCCGG AAACGGGATACATACTTGTC
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerases; NAD Dependent Epimerase/Dehydratase; NAD-Dependent Epimerase/Dehydratase Family Protein; Epimerase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Oxidoreductase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Epimerase/Dehydratase-Like Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSVTNMKTIKRTLLIVGCGDIALRAAPLLLTHYRLLGLYRKPEQCASLRSLGITPVSGDLDIPDSLDKLAGAADAVLHLA PPPARGRTDTRTAHLLAALTRRPKMKRSMLPQRFIYISTSGVYGDCKGALVNETRAINPLTERAVRRADAERRVRHWGLR NGVNVSILRVPGIYAGDRLPLARLREGAPVLASEDDGYTNHIHADDLVRIVVAALRYARPGRVYHACDDSNLKMGEYFDL VADRFALPRPSRVPRAEAEGRIAPGMLSFMQESRRLTNMRIKQELRVHLRYPTVAECLGAAG
Sequences:
>Translated_302_residues MSVTNMKTIKRTLLIVGCGDIALRAAPLLLTHYRLLGLYRKPEQCASLRSLGITPVSGDLDIPDSLDKLAGAADAVLHLA PPPARGRTDTRTAHLLAALTRRPKMKRSMLPQRFIYISTSGVYGDCKGALVNETRAINPLTERAVRRADAERRVRHWGLR NGVNVSILRVPGIYAGDRLPLARLREGAPVLASEDDGYTNHIHADDLVRIVVAALRYARPGRVYHACDDSNLKMGEYFDL VADRFALPRPSRVPRAEAEGRIAPGMLSFMQESRRLTNMRIKQELRVHLRYPTVAECLGAAG >Mature_301_residues SVTNMKTIKRTLLIVGCGDIALRAAPLLLTHYRLLGLYRKPEQCASLRSLGITPVSGDLDIPDSLDKLAGAADAVLHLAP PPARGRTDTRTAHLLAALTRRPKMKRSMLPQRFIYISTSGVYGDCKGALVNETRAINPLTERAVRRADAERRVRHWGLRN GVNVSILRVPGIYAGDRLPLARLREGAPVLASEDDGYTNHIHADDLVRIVVAALRYARPGRVYHACDDSNLKMGEYFDLV ADRFALPRPSRVPRAEAEGRIAPGMLSFMQESRRLTNMRIKQELRVHLRYPTVAECLGAAG
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33413; Mature: 33282
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVTNMKTIKRTLLIVGCGDIALRAAPLLLTHYRLLGLYRKPEQCASLRSLGITPVSGDL CCCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC DIPDSLDKLAGAADAVLHLAPPPARGRTDTRTAHLLAALTRRPKMKRSMLPQRFIYISTS CCCHHHHHHHCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCEEEEEECC GVYGDCKGALVNETRAINPLTERAVRRADAERRVRHWGLRNGVNVSILRVPGIYAGDRLP CCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC LARLREGAPVLASEDDGYTNHIHADDLVRIVVAALRYARPGRVYHACDDSNLKMGEYFDL HHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH VADRFALPRPSRVPRAEAEGRIAPGMLSFMQESRRLTNMRIKQELRVHLRYPTVAECLGA HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCC AG CC >Mature Secondary Structure SVTNMKTIKRTLLIVGCGDIALRAAPLLLTHYRLLGLYRKPEQCASLRSLGITPVSGDL CCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCC DIPDSLDKLAGAADAVLHLAPPPARGRTDTRTAHLLAALTRRPKMKRSMLPQRFIYISTS CCCHHHHHHHCHHHHEEEECCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCEEEEEECC GVYGDCKGALVNETRAINPLTERAVRRADAERRVRHWGLRNGVNVSILRVPGIYAGDRLP CCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCC LARLREGAPVLASEDDGYTNHIHADDLVRIVVAALRYARPGRVYHACDDSNLKMGEYFDL HHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHH VADRFALPRPSRVPRAEAEGRIAPGMLSFMQESRRLTNMRIKQELRVHLRYPTVAECLGA HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHCC AG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA