| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is capK [H]
Identifier: 82703760
GI number: 82703760
Start: 3031925
End: 3033328
Strand: Reverse
Name: capK [H]
Synonym: Nmul_A2647
Alternate gene names: 82703760
Gene position: 3033328-3031925 (Counterclockwise)
Preceding gene: 82703761
Following gene: 82703759
Centisome position: 95.26
GC content: 48.65
Gene sequence:
>1404_bases ATGGGTGTGCAATGCGAGGCATCAGTTATGCTTCGTCTCGGCGAGCAGGAAACGACGATGGCAGGCTTTGACTATACTCT TGTTCAGAAGTGGTTTGGCAGAGCGCGCTTCCAGCTGCTCGATCTAATGAGAGGTACCCAATCCTTGACGCTGTTAAAAG AACTGGAGGCGGTCCAGTTTGAATCGCAGGAGGTTATCAGGTTCCGTCAAAAAAAAATGCTGGAAGCATACCTCGATTCG ATGAGGGATGTGCCCTATTACAAGAAACATAAATCCATTACCGAATTTCCTGTCATTGACAAAAAATTCATAAATGAAAA TAGAGAATCCCTTTTGAACAGAAGCTATGGAGGGAAGATTTTTCGTAAGAAAACGGGGGGTTCAACGGGAGAGCCTTTTG TTTACGTCACCGGGGTCAAATCCCAATCCTATCTCTGGGCCGGTATTCTGCTGAGCTGGCGAACCGCTGGCTATCATCTG GGGGAGCCCGTGGCTATCCTGGCAGGCTCATCTCTTTTTACCTCCGGAATCAAGCAGAATATCTATTATGGAATAATGAA CGCGCGCCTTTTCTCAGCGTTCGAAATGAGCGCGAAGAGGCTGGATACTTATGCCAGAGAGATCGCGCGAGGTAAATACC GTCTTTTATATGGCTATGCATCAGCCGTTCAGGAACTCGCTGAATATTTGCTTTCAAGGCCTGACCGCCCGACCTTTTCT CTGAGAGGAATAGTAACTACTGCCGAAAATCTGACGCCCGGAATGCGCGAGACTATTGAACGCGCATTTGGCGTTCCCTG CTTCAGTCAATATGGATGTCACGATGCGGGGATATCGGCCTACGAATGCGAGCAGAGGAAAGGGTTTCACTTGATTACTG ACCGCTGCTACCCTGAAGTGCTGGAAGACCGGCGTCTCGTTTCCACCGATATATCAAATGAAGCACTCTTTCTGCCCAGG TATGATACGGGCGACTTGATAACGATGTCGGATGAGCCCTGTGCGTGCGGCAGAGGGTTTCCTCTGATTGCTGCCGTAAT AGGGCGATCGAATGACGTTATTTCTGACCAGGCGGGCAATACTGTCCATTCCGAGTTTTTTACTCACCTGTTTCGGGAAG TTCAGGCAATTACAGCTTTTCAAGTCGCGTATGACGGGCGCACGCTTGTTGTCAATCTCCATACTCGTGACACGGATACG GACTGGTCGCCCTATAAGGAGCGTATCCAAAAGAGTCTCGCAGTCGAGAGAATCGATTTCATTCAAAACCAGCCATTTAT GAAATCAGCGAACGCGAAGCATAAATTCGTCTTGAAACTACCGGAGATTGGCTTGTATTACGAAACGGATGATTGCACGG CAAAGGAGAAGAGCGATAAAGACGAGAACCCGCATCAAGCATGA
Upstream 100 bases:
>100_bases GGGGAGGGAGGCGATTCGCCTCTATTTAGACAGGGCAGGCCGATGTATGATATGGAACCAATGCCAATGACCGGGAGGAG CATGGAAAGGAAAAGATTCT
Downstream 100 bases:
>100_bases ACCCGTGATCTGAATTGCCCTGTTTTGTGTTAATTCGTAAGCGGGACAACGAGATACGACGTGAAAGCAGCGGTTAAATT TATATAGCCACTTCTTTGGT
Product: coenzyme F390 synthetase-like protein
Products: AMP; Phenylacetyl-CoA; Diphosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MGVQCEASVMLRLGEQETTMAGFDYTLVQKWFGRARFQLLDLMRGTQSLTLLKELEAVQFESQEVIRFRQKKMLEAYLDS MRDVPYYKKHKSITEFPVIDKKFINENRESLLNRSYGGKIFRKKTGGSTGEPFVYVTGVKSQSYLWAGILLSWRTAGYHL GEPVAILAGSSLFTSGIKQNIYYGIMNARLFSAFEMSAKRLDTYAREIARGKYRLLYGYASAVQELAEYLLSRPDRPTFS LRGIVTTAENLTPGMRETIERAFGVPCFSQYGCHDAGISAYECEQRKGFHLITDRCYPEVLEDRRLVSTDISNEALFLPR YDTGDLITMSDEPCACGRGFPLIAAVIGRSNDVISDQAGNTVHSEFFTHLFREVQAITAFQVAYDGRTLVVNLHTRDTDT DWSPYKERIQKSLAVERIDFIQNQPFMKSANAKHKFVLKLPEIGLYYETDDCTAKEKSDKDENPHQA
Sequences:
>Translated_467_residues MGVQCEASVMLRLGEQETTMAGFDYTLVQKWFGRARFQLLDLMRGTQSLTLLKELEAVQFESQEVIRFRQKKMLEAYLDS MRDVPYYKKHKSITEFPVIDKKFINENRESLLNRSYGGKIFRKKTGGSTGEPFVYVTGVKSQSYLWAGILLSWRTAGYHL GEPVAILAGSSLFTSGIKQNIYYGIMNARLFSAFEMSAKRLDTYAREIARGKYRLLYGYASAVQELAEYLLSRPDRPTFS LRGIVTTAENLTPGMRETIERAFGVPCFSQYGCHDAGISAYECEQRKGFHLITDRCYPEVLEDRRLVSTDISNEALFLPR YDTGDLITMSDEPCACGRGFPLIAAVIGRSNDVISDQAGNTVHSEFFTHLFREVQAITAFQVAYDGRTLVVNLHTRDTDT DWSPYKERIQKSLAVERIDFIQNQPFMKSANAKHKFVLKLPEIGLYYETDDCTAKEKSDKDENPHQA >Mature_466_residues GVQCEASVMLRLGEQETTMAGFDYTLVQKWFGRARFQLLDLMRGTQSLTLLKELEAVQFESQEVIRFRQKKMLEAYLDSM RDVPYYKKHKSITEFPVIDKKFINENRESLLNRSYGGKIFRKKTGGSTGEPFVYVTGVKSQSYLWAGILLSWRTAGYHLG EPVAILAGSSLFTSGIKQNIYYGIMNARLFSAFEMSAKRLDTYAREIARGKYRLLYGYASAVQELAEYLLSRPDRPTFSL RGIVTTAENLTPGMRETIERAFGVPCFSQYGCHDAGISAYECEQRKGFHLITDRCYPEVLEDRRLVSTDISNEALFLPRY DTGDLITMSDEPCACGRGFPLIAAVIGRSNDVISDQAGNTVHSEFFTHLFREVQAITAFQVAYDGRTLVVNLHTRDTDTD WSPYKERIQKSLAVERIDFIQNQPFMKSANAKHKFVLKLPEIGLYYETDDCTAKEKSDKDENPHQA
Specific function: Required for the biosynthesis of type 1 capsular polysaccharide [H]
COG id: COG1541
COG function: function code H; Coenzyme F390 synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.2.1.30 [C]
Molecular weight: Translated: 53200; Mature: 53069
Theoretical pI: Translated: 7.49; Mature: 7.49
Prosite motif: PS01005 FORMATE_NITRITE_TP_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVQCEASVMLRLGEQETTMAGFDYTLVQKWFGRARFQLLDLMRGTQSLTLLKELEAVQF CCCCCCHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC ESQEVIRFRQKKMLEAYLDSMRDVPYYKKHKSITEFPVIDKKFINENRESLLNRSYGGKI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCE FRKKTGGSTGEPFVYVTGVKSQSYLWAGILLSWRTAGYHLGEPVAILAGSSLFTSGIKQN EEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH IYYGIMNARLFSAFEMSAKRLDTYAREIARGKYRLLYGYASAVQELAEYLLSRPDRPTFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEE LRGIVTTAENLTPGMRETIERAFGVPCFSQYGCHDAGISAYECEQRKGFHLITDRCYPEV EEEEEEEHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCCCCEEEHHHCCHHH LEDRRLVSTDISNEALFLPRYDTGDLITMSDEPCACGRGFPLIAAVIGRSNDVISDQAGN HHCCCEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC TVHSEFFTHLFREVQAITAFQVAYDGRTLVVNLHTRDTDTDWSPYKERIQKSLAVERIDF HHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH IQNQPFMKSANAKHKFVLKLPEIGLYYETDDCTAKEKSDKDENPHQA HCCCCCHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GVQCEASVMLRLGEQETTMAGFDYTLVQKWFGRARFQLLDLMRGTQSLTLLKELEAVQF CCCCCHHHHHHCCCCHHEECCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC ESQEVIRFRQKKMLEAYLDSMRDVPYYKKHKSITEFPVIDKKFINENRESLLNRSYGGKI CHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHCCHHHHHHHHCCCCCE FRKKTGGSTGEPFVYVTGVKSQSYLWAGILLSWRTAGYHLGEPVAILAGSSLFTSGIKQN EEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHH IYYGIMNARLFSAFEMSAKRLDTYAREIARGKYRLLYGYASAVQELAEYLLSRPDRPTFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEE LRGIVTTAENLTPGMRETIERAFGVPCFSQYGCHDAGISAYECEQRKGFHLITDRCYPEV EEEEEEEHHHCCCHHHHHHHHHHCCCCHHHCCCCCCCCCHHHHHCCCCCEEEHHHCCHHH LEDRRLVSTDISNEALFLPRYDTGDLITMSDEPCACGRGFPLIAAVIGRSNDVISDQAGN HHCCCEEECCCCCCEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC TVHSEFFTHLFREVQAITAFQVAYDGRTLVVNLHTRDTDTDWSPYKERIQKSLAVERIDF HHHHHHHHHHHHHHHHHHHHEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH IQNQPFMKSANAKHKFVLKLPEIGLYYETDDCTAKEKSDKDENPHQA HCCCCCHHCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; Coenzyme A; Phenylacetic acid [C]
Specific reaction: ATP + Coenzyme A + Phenylacetic acid --> AMP + Phenylacetyl-CoA + Diphosphate [C]
General reaction: Forming of carbon sulfur bond [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961465 [H]