Click here to switch to the map view.

The map label for this gene is perM [H]

Identifier: 82703757

GI number: 82703757

Start: 3029060

End: 3030241

Strand: Direct

Name: perM [H]

Synonym: Nmul_A2644

Alternate gene names: 82703757

Gene position: 3029060-3030241 (Clockwise)

Preceding gene: 82703756

Following gene: 82703758

Centisome position: 95.13

GC content: 53.3

Gene sequence:

>1182_bases
ATGAACTCCCCCTCCGATGAATCATCAATCGAATTGAAGGCACCGGTCCTTGAGGTTGCCGCACCGATTGTTACCGAAAA
AATAACCCTCCTTGATACTGAACCAAGGGAAAGAGGCGCAATGGCTCTTTGGATACTTGCATTCATTGCCGTCATTGCCG
CGCTATATCTGGGCCGGGCTTTCCTTGTTCCGCTATTGTTTGGCATCCTGGTAAGTTACACATTAAGCCCGGTGGTAGAT
TGGTTTGAACGTTATCGTATTCCGCGGGCATTGGGGGCGATATGTGTACTGGGAGTGCTCGTCGGGGGCACTTCCTGGAT
GGCGCTCTCTTTAAGCGCCGATGCGGCGATAATGGCTGAACAACTTCCGGAGACGGCGCGCAAGCTGCGGCAGAGCTTAA
ACATTTTGCGCGATGGGAACTGGAGCACGCTGCGTCATTTTCAGGAAGCCGCCGATGAGCTCGGGCGGGTGGCTGTCGAC
GCCGGTCTGGAATCAGCAGACCGCGCAGTCATAATCAAGGAATCGGAAAATAATGCATGGCTGCGCGATCTTATGCTCAC
GCAGTCAGCCCTGCTGGTCACGTTTACTGCACAAGCCCCGGTAGTATTGCTGCTTACTTATTTTTTGCTGGCCGCAGGAA
GCCATTTCCGACGCAAACTTGTACGATTTGTCGGGCCACGGCTTTCTCAGAAGAAAGATGCGGTGCGGATACTTGAAGAA
GTGGACAGTCAAATCCAGCGCTACCTCCTTGTCATGTTGATATCAAATGCTTTAATTGCCGTCATGACGTGGCTGGCGTT
CGAAATGCTGGGACTGAAGCATCCGGCCGTATGGGGGGTAGCTGCCGGAGTGCTACATTTTATTCCGTACTTGGGAACTG
TTGGAGTTGCGCTCGCCTGCGGCGTTGCCGGGATGCTGCAATTTGGCTCGCTTAGCCAGGCATTCTTGCTGGTAGCGGTA
TTTTTGCTCATTTCGGGTGTGGTGGGAATGATGCTTACCACATGGCTACAGGGCAGATTTGCGCGTGTGAATCCCGCAGT
TCTGTTCATCGCACTGTTATTCTTCGGCTGGCTGTGGGGCGCTGCGGGTTTACTGCTCGGCGCCCCCTTACTGGCTATTG
TCAAGGTAATCTGTGATCGAGTCGAGTCGCTTAAACCGGTCGGTGAACTTTTGGGACAGTAA

Upstream 100 bases:

>100_bases
TTGACCACGGGTGAGATCAATATCAGCGGAATCACCAAGACGAGTAGAGAGGATGGTGCGCGCACGAAAGCACGACCCTA
TCATTTAGCCCAAGGACCTC

Downstream 100 bases:

>100_bases
TTAACTTTCACATCTGCGAATGGGCAATCCCGAAGAAAAGGCGCAAGAGGCTCCTAATGGAGCCGATGTATGAATCAATA
GCGACCCTGCCAGGGCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNSPSDESSIELKAPVLEVAAPIVTEKITLLDTEPRERGAMALWILAFIAVIAALYLGRAFLVPLLFGILVSYTLSPVVD
WFERYRIPRALGAICVLGVLVGGTSWMALSLSADAAIMAEQLPETARKLRQSLNILRDGNWSTLRHFQEAADELGRVAVD
AGLESADRAVIIKESENNAWLRDLMLTQSALLVTFTAQAPVVLLLTYFLLAAGSHFRRKLVRFVGPRLSQKKDAVRILEE
VDSQIQRYLLVMLISNALIAVMTWLAFEMLGLKHPAVWGVAAGVLHFIPYLGTVGVALACGVAGMLQFGSLSQAFLLVAV
FLLISGVVGMMLTTWLQGRFARVNPAVLFIALLFFGWLWGAAGLLLGAPLLAIVKVICDRVESLKPVGELLGQ

Sequences:

>Translated_393_residues
MNSPSDESSIELKAPVLEVAAPIVTEKITLLDTEPRERGAMALWILAFIAVIAALYLGRAFLVPLLFGILVSYTLSPVVD
WFERYRIPRALGAICVLGVLVGGTSWMALSLSADAAIMAEQLPETARKLRQSLNILRDGNWSTLRHFQEAADELGRVAVD
AGLESADRAVIIKESENNAWLRDLMLTQSALLVTFTAQAPVVLLLTYFLLAAGSHFRRKLVRFVGPRLSQKKDAVRILEE
VDSQIQRYLLVMLISNALIAVMTWLAFEMLGLKHPAVWGVAAGVLHFIPYLGTVGVALACGVAGMLQFGSLSQAFLLVAV
FLLISGVVGMMLTTWLQGRFARVNPAVLFIALLFFGWLWGAAGLLLGAPLLAIVKVICDRVESLKPVGELLGQ
>Mature_393_residues
MNSPSDESSIELKAPVLEVAAPIVTEKITLLDTEPRERGAMALWILAFIAVIAALYLGRAFLVPLLFGILVSYTLSPVVD
WFERYRIPRALGAICVLGVLVGGTSWMALSLSADAAIMAEQLPETARKLRQSLNILRDGNWSTLRHFQEAADELGRVAVD
AGLESADRAVIIKESENNAWLRDLMLTQSALLVTFTAQAPVVLLLTYFLLAAGSHFRRKLVRFVGPRLSQKKDAVRILEE
VDSQIQRYLLVMLISNALIAVMTWLAFEMLGLKHPAVWGVAAGVLHFIPYLGTVGVALACGVAGMLQFGSLSQAFLLVAV
FLLISGVVGMMLTTWLQGRFARVNPAVLFIALLFFGWLWGAAGLLLGAPLLAIVKVICDRVESLKPVGELLGQ

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

Organism=Escherichia coli, GI1787885, Length=332, Percent_Identity=25.9036144578313, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI87082271, Length=366, Percent_Identity=24.5901639344262, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1788838, Length=261, Percent_Identity=25.2873563218391, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 42775; Mature: 42775

Theoretical pI: Translated: 8.07; Mature: 8.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPSDESSIELKAPVLEVAAPIVTEKITLLDTEPRERGAMALWILAFIAVIAALYLGRA
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLVPLLFGILVSYTLSPVVDWFERYRIPRALGAICVLGVLVGGTSWMALSLSADAAIMAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
QLPETARKLRQSLNILRDGNWSTLRHFQEAADELGRVAVDAGLESADRAVIIKESENNAW
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHH
LRDLMLTQSALLVTFTAQAPVVLLLTYFLLAAGSHFRRKLVRFVGPRLSQKKDAVRILEE
HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
VDSQIQRYLLVMLISNALIAVMTWLAFEMLGLKHPAVWGVAAGVLHFIPYLGTVGVALAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GVAGMLQFGSLSQAFLLVAVFLLISGVVGMMLTTWLQGRFARVNPAVLFIALLFFGWLWG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH
AAGLLLGAPLLAIVKVICDRVESLKPVGELLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSPSDESSIELKAPVLEVAAPIVTEKITLLDTEPRERGAMALWILAFIAVIAALYLGRA
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH
FLVPLLFGILVSYTLSPVVDWFERYRIPRALGAICVLGVLVGGTSWMALSLSADAAIMAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
QLPETARKLRQSLNILRDGNWSTLRHFQEAADELGRVAVDAGLESADRAVIIKESENNAW
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHH
LRDLMLTQSALLVTFTAQAPVVLLLTYFLLAAGSHFRRKLVRFVGPRLSQKKDAVRILEE
HHHHHHHHHHHHEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHH
VDSQIQRYLLVMLISNALIAVMTWLAFEMLGLKHPAVWGVAAGVLHFIPYLGTVGVALAC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GVAGMLQFGSLSQAFLLVAVFLLISGVVGMMLTTWLQGRFARVNPAVLFIALLFFGWLWG
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHH
AAGLLLGAPLLAIVKVICDRVESLKPVGELLGQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]