| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is imuB [H]
Identifier: 82703711
GI number: 82703711
Start: 2982661
End: 2984181
Strand: Direct
Name: imuB [H]
Synonym: Nmul_A2598
Alternate gene names: 82703711
Gene position: 2982661-2984181 (Clockwise)
Preceding gene: 82703710
Following gene: 82703712
Centisome position: 93.67
GC content: 54.7
Gene sequence:
>1521_bases ATGCTGTGGATTGCCCTTTACTTTCCCGCTTTATCGCTTGACTGGGTTGAACGCCGGTTTCCGGAAGCGCTCATTCCCGC AATCGGAGTAACTGTCCGCAAAGGGAACCAGATCTGTATTCAACAAGCCAATAAGCCGGCGCAGGCGCGGGGAGTAATGG AGGGTCAGCCTCTCGCCAGTGCTTTGGCTGTTTTCCCGGATCTGGTGATCATGGAACAGGACTCGCATGAAGAAGGAAAA GCCCTGCAGCAAGCCGTGTATGCCGCATTACGCTTTACACCCAATATAGCGATCCAGAACAGCGGCCTGATTGCCGAGGT CTCCGGAAGCCTGAAATTGTTTGGCGGCCTGAAAAAGCTCTGCCAGTCGCTCAATCGGGTAGTGACTGCGCAAGGTTTGC AGCTCAGCGCAGGGATTGCGCCCACCGCAACGGGAGCATGGCTGCTGGCCCGTTCCGCCTCGTCGGGCACTGTCATCAAT GGGAAGGGTGAGGAGTTCCGGATATTGCTCGACGCCTTGCCTGTCGGTTTTCTGGAATCGGCTCAGCCTCATCTTGAAGT CATTCGCGGGATCGGCTGTAAAACACTGGCCGATTTGCAGCGATTGCCTCGCAGCGGAGTAGCGCGTCGCTTTGGTCAGA ACCTGCCGGCAGAGCTCGATCGCGCCTACGGTGACGCGCCCGATCCACAAAAGTGGTTCGAGGCGCCGGAAGATTTCCAG CAAAAAATGAAAATGATGGGGCTGATTGAAAATGCCGGATTGCTGCTGGTTCCTGCGCAACGAATGGTCGAGCAGATGTG CGGCTGGCTGGCTTTGCGTCATGCGGCGGTATCCGCCTTTTCATTCGTGCTGCATCACGAATATTCCCTGCGGCAACCCC ACAAATTTACATCCATAAACATACACCTTTCCGAGCAAAGCAGCGATCCGGCGCATTTAATGCTGTTGCTGCGCGAGCAT CTGGAACGTACAAAAATAGTGGCCCCAGTATGTGAACTGGAACTGACGGCAGATGAAATAGCGGCGGGAGCAGACGGCAA TCTGGAATTGTTTCCCACCATGCAATCCGAGACTACTTCACTCAATCGCTTCATCGAGAAATTTTCTTCCCGCCTGGGAC CGGAAGCCATCACCGGTTTAAAGGTGGTTTCCGATCATCGCCCTGAATACAGCCAAAGGTTGGAACTCTCAGGGAGGGGT GCCTTGAATCGCTTTTCGAAGCGAGGGAGAAACTCGCAAATCATTCCGCCGGAATCGCCCCGTCCAGCCTGGCTGATGGA AATCCCGCTGGAACTGAAGGTGCAACGTGGCCGGCCGGTGTATGAGTCGCCACTGAAACTGCTTGCAGGGCCGGAGCGAA TCGAGGCCGGCTGGTGGAATGATGACGCCATCGCGCGGGATTACTTCATTGCGGAGAACGACCAGGGCCAATTGTTATGG ATTTACCGCGAACACAATCCGGTAGAAAAAGATAAGGGAAACAAAGACGGAAACTGGTATTTGCAAGGATTGTTTGGATA G
Upstream 100 bases:
>100_bases GTCCTGCCTATTCGCATCCCCCTGCCTCAAGCCGCCGTCTTTTCCCGCTCCGCTGAATTGAAACCCGCTCTCATCCCCTC TTACTGTTGAAGTTGAATCC
Downstream 100 bases:
>100_bases CTTCCATGCCCTCTTCTGCTCCGGATTACGCTGAACTTCATTGCTGTTCCACCTTCAACTTCCTCAAAGGCGCTTCCATG CCGGAAGAGCTGGTGGAACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 506; Mature: 506
Protein sequence:
>506_residues MLWIALYFPALSLDWVERRFPEALIPAIGVTVRKGNQICIQQANKPAQARGVMEGQPLASALAVFPDLVIMEQDSHEEGK ALQQAVYAALRFTPNIAIQNSGLIAEVSGSLKLFGGLKKLCQSLNRVVTAQGLQLSAGIAPTATGAWLLARSASSGTVIN GKGEEFRILLDALPVGFLESAQPHLEVIRGIGCKTLADLQRLPRSGVARRFGQNLPAELDRAYGDAPDPQKWFEAPEDFQ QKMKMMGLIENAGLLLVPAQRMVEQMCGWLALRHAAVSAFSFVLHHEYSLRQPHKFTSINIHLSEQSSDPAHLMLLLREH LERTKIVAPVCELELTADEIAAGADGNLELFPTMQSETTSLNRFIEKFSSRLGPEAITGLKVVSDHRPEYSQRLELSGRG ALNRFSKRGRNSQIIPPESPRPAWLMEIPLELKVQRGRPVYESPLKLLAGPERIEAGWWNDDAIARDYFIAENDQGQLLW IYREHNPVEKDKGNKDGNWYLQGLFG
Sequences:
>Translated_506_residues MLWIALYFPALSLDWVERRFPEALIPAIGVTVRKGNQICIQQANKPAQARGVMEGQPLASALAVFPDLVIMEQDSHEEGK ALQQAVYAALRFTPNIAIQNSGLIAEVSGSLKLFGGLKKLCQSLNRVVTAQGLQLSAGIAPTATGAWLLARSASSGTVIN GKGEEFRILLDALPVGFLESAQPHLEVIRGIGCKTLADLQRLPRSGVARRFGQNLPAELDRAYGDAPDPQKWFEAPEDFQ QKMKMMGLIENAGLLLVPAQRMVEQMCGWLALRHAAVSAFSFVLHHEYSLRQPHKFTSINIHLSEQSSDPAHLMLLLREH LERTKIVAPVCELELTADEIAAGADGNLELFPTMQSETTSLNRFIEKFSSRLGPEAITGLKVVSDHRPEYSQRLELSGRG ALNRFSKRGRNSQIIPPESPRPAWLMEIPLELKVQRGRPVYESPLKLLAGPERIEAGWWNDDAIARDYFIAENDQGQLLW IYREHNPVEKDKGNKDGNWYLQGLFG >Mature_506_residues MLWIALYFPALSLDWVERRFPEALIPAIGVTVRKGNQICIQQANKPAQARGVMEGQPLASALAVFPDLVIMEQDSHEEGK ALQQAVYAALRFTPNIAIQNSGLIAEVSGSLKLFGGLKKLCQSLNRVVTAQGLQLSAGIAPTATGAWLLARSASSGTVIN GKGEEFRILLDALPVGFLESAQPHLEVIRGIGCKTLADLQRLPRSGVARRFGQNLPAELDRAYGDAPDPQKWFEAPEDFQ QKMKMMGLIENAGLLLVPAQRMVEQMCGWLALRHAAVSAFSFVLHHEYSLRQPHKFTSINIHLSEQSSDPAHLMLLLREH LERTKIVAPVCELELTADEIAAGADGNLELFPTMQSETTSLNRFIEKFSSRLGPEAITGLKVVSDHRPEYSQRLELSGRG ALNRFSKRGRNSQIIPPESPRPAWLMEIPLELKVQRGRPVYESPLKLLAGPERIEAGWWNDDAIARDYFIAENDQGQLLW IYREHNPVEKDKGNKDGNWYLQGLFG
Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]
COG id: COG0389
COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001126 [H]
Pfam domain/function: PF00817 IMS [H]
EC number: NA
Molecular weight: Translated: 56186; Mature: 56186
Theoretical pI: Translated: 6.91; Mature: 6.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLWIALYFPALSLDWVERRFPEALIPAIGVTVRKGNQICIQQANKPAQARGVMEGQPLAS CEEEEEECCCCCHHHHHHHCCHHHHHHHCEEEECCCEEEEECCCCCHHHCCCCCCCHHHH ALAVFPDLVIMEQDSHEEGKALQQAVYAALRFTPNIAIQNSGLIAEVSGSLKLFGGLKKL HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHH CQSLNRVVTAQGLQLSAGIAPTATGAWLLARSASSGTVINGKGEEFRILLDALPVGFLES HHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEHHCCCHHHHC AQPHLEVIRGIGCKTLADLQRLPRSGVARRFGQNLPAELDRAYGDAPDPQKWFEAPEDFQ CCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCHHHHCCCCHHHH QKMKMMGLIENAGLLLVPAQRMVEQMCGWLALRHAAVSAFSFVLHHEYSLRQPHKFTSIN HHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE IHLSEQSSDPAHLMLLLREHLERTKIVAPVCELELTADEIAAGADGNLELFPTMQSETTS EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCEEEEECCCHHHHH LNRFIEKFSSRLGPEAITGLKVVSDHRPEYSQRLELSGRGALNRFSKRGRNSQIIPPESP HHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC RPAWLMEIPLELKVQRGRPVYESPLKLLAGPERIEAGWWNDDAIARDYFIAENDQGQLLW CCCEEEECCEEEEEECCCCCHHHHHHHHCCHHHHCCCCCCCCCHHHCEEEEECCCCCEEE IYREHNPVEKDKGNKDGNWYLQGLFG EEECCCCCCCCCCCCCCCEEEEEECC >Mature Secondary Structure MLWIALYFPALSLDWVERRFPEALIPAIGVTVRKGNQICIQQANKPAQARGVMEGQPLAS CEEEEEECCCCCHHHHHHHCCHHHHHHHCEEEECCCEEEEECCCCCHHHCCCCCCCHHHH ALAVFPDLVIMEQDSHEEGKALQQAVYAALRFTPNIAIQNSGLIAEVSGSLKLFGGLKKL HHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCEEEEECCCHHHHHHHHHH CQSLNRVVTAQGLQLSAGIAPTATGAWLLARSASSGTVINGKGEEFRILLDALPVGFLES HHHHHHHHHHCCCEEECCCCCCCCCCEEEEECCCCCCEECCCCCEEEEEEHHCCCHHHHC AQPHLEVIRGIGCKTLADLQRLPRSGVARRFGQNLPAELDRAYGDAPDPQKWFEAPEDFQ CCHHHHHHHCCCHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCCCHHHHCCCCHHHH QKMKMMGLIENAGLLLVPAQRMVEQMCGWLALRHAAVSAFSFVLHHEYSLRQPHKFTSIN HHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEE IHLSEQSSDPAHLMLLLREHLERTKIVAPVCELELTADEIAAGADGNLELFPTMQSETTS EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECHHHHCCCCCCCEEEEECCCHHHHH LNRFIEKFSSRLGPEAITGLKVVSDHRPEYSQRLELSGRGALNRFSKRGRNSQIIPPESP HHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCC RPAWLMEIPLELKVQRGRPVYESPLKLLAGPERIEAGWWNDDAIARDYFIAENDQGQLLW CCCEEEECCEEEEEECCCCCHHHHHHHHCCHHHHCCCCCCCCCHHHCEEEEECCCCCEEE IYREHNPVEKDKGNKDGNWYLQGLFG EEECCCCCCCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA