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The map label for this gene is outD [H]

Identifier: 82703698

GI number: 82703698

Start: 2968191

End: 2970440

Strand: Reverse

Name: outD [H]

Synonym: Nmul_A2583

Alternate gene names: 82703698

Gene position: 2970440-2968191 (Counterclockwise)

Preceding gene: 82703699

Following gene: 82703697

Centisome position: 93.29

GC content: 57.51

Gene sequence:

>2250_bases
ATGAAAACTGGCAAACACGTTCTGCTTGCCCTGGTTCTTGCCGGAATTGCAGGATGCGCGACAAACAATGCGTTCGTGGA
GGGCAAGCGGCTCATAGCCGAGGGCAAGCTCGACACTGGGCTTGCCAGTCTCGAACAGGCGGCGCGCGAAAATCCGGATA
ATCTTGAAATTCGCGCGGTGCTCGCGCGCCAGCGCGAAGCGATAGCCGCGCGTTTCGTATTCGAGGCGGAAGCCGCAAGG
TCGACAGGTGATCTGGAAGCGGCTGAACGGAGTTTTCGCCGGGCGCTTGAAATAAATCCACGTCATGAACGCGCACTCGC
CGGGTTGGAGGCGATCAATATGGATCGCCGCCATACAGCGGCAATAAAACGAGCGGAAGAATTGCTGGAGCGGGGGGAGT
ATGCAGCTGCTTCAAGCGAGGTCCGCTCCGTGCTGCAGGAAAATCCGATGCAGCGGGATGCACGCAGGCTCATTCAGCGC
ATCACCGAAATGGAAGTGCAAGCCGCGCAAGCGGGCCCTATCCTGAAAACCGCGTTTAAAAAACCTATCACGCTCGAGTT
TCGAGATACGGGCCTGAAATCGGTATTCGAAATCCTGGCGCGCACCGGCGGCATCAACGTGGTCTTTGACAAGGACGTCA
AGCAGGACAGCAAGACGACGATTTTCGTGCGCGAGACCAATATCGAGGATGTATTCAAGCTCCTTCTGGTGACGAACCAG
CTCGCACACAAGGTCCTCAACGAAAATTCGGTGCTGATCTATCCGAATACTCCGGCCAAGCAGAAGGAATACCAGGAATT
GATGGTGCGCAGTTTCTTTGTCACGAATACCGATGTGAAGCAGATGGTCGCGATGGTCAAGGGGTTGATCAAAACCAAGG
ACATGCACGTCGACGAAAAGCTGAACCTGTTCGTCATGAAAGACACGCCGGAGGCGATCCGGCTGGCCGAGCGGCTGGTT
ACGCTGAATGATCTGGCCGATCCCGAAGTCATGCTGGAAGTGGAGGTGCTGGAAATCGGGCGCAACAAACTGCTCAACCT
CGGATTGCAGTATCCTGAGAAGATCAATGTAAATTATCTTACCGCAGCCAGTGCTGCCGGCGCGGCTCCTTTTCCGCCCT
TTCAGATCAGCCGTGCAGGGGTTAACGGCAATGGTTCCAATCTCGACAACCTGATTGGATTCGTTGCCAATCCCGCCCTG
ATCGTCAACCTCAAGCAGCAGGACGGGCTGATCAATGTGCTTGCCAATCCGCGCATTCGCGTCAAGAACCGGGAGAAAGC
GAAGGTCCTGATCGGCGACAAGGTTCCAGTCGTCACGACGACCGCAGCCGCCAACGTGGGTGTGGCATCATCGGTCAGCT
ACCTCGATGTGGGACTCAAGCTGGACGTCGAATCCACCATCTCGCTGCAGGATGAGGTTTCCATGAAGGTCAGCCTGGAA
GTGAGCAATATCGTCAAGGAAGTGCCGGTAACGGGAGGGGGCCTTGCCTATCAGGTAGGGACGCGCACGGCAGCGACCAC
GCTGGCGTTGAAGGATGGCGAAACCCAGGTTCTGGCAGGATTGATCAGCGATGACGAGCGCACCACGCTTTCCAAGGTTC
CCGGGCTGGCAGAGTTGCCGTGGATCGGAAAGCTTTTCATCAATAAGAACGTTGTCCGAAACAAGACTGAAATCGCGCTG
CTGATTACGCCGCGTATCGTGCGCAATATTGCCCGTCCGGCGAAAGCGGTCAGCGAAGTGCCCTTCGGTACGGAGAATGC
GATAGCGGTTTCGCCGCTGATGATCGGCAAAGTGGCGCCGCGGGCGCTGGCGATGGCTTCTTCCTCTCCAACCTCCGATG
CTAACGCCAGCCGGCAGTGGCCATCCGCGCCTTCCAGGGAGGAAACCCGTCCGCCGGCGCCGCCCGAGGGGGCACCGGTT
GCGACACTGGCTGCGCCGGAACAGGTGTCCGCAGGACAGGAATTTGTGGTGAGCGTGACCCTCGCCGGTGCAGATGCACT
CCCGCCCGCGGAACTGGATCTGAATTATGACCCTGTGGCGCTTGAACCGGTGGACGAGGGTGATAAATCCGGAACACGCG
TATTGAAACTGAGCAAGGGGGGCGGCGCCGCGGATGTGCGATTCAGGATTTTGGCGCAAAAGCCTGTCACGACTCAGATC
AGTATCGGGAATATCAGTTTCAAGGACGAAAGCGGGCCGCTTCCCGTTCCGGTGCCTTTGCCACCGGCTGTCAATGTGGA
TATTCGTTGA

Upstream 100 bases:

>100_bases
AGTATCGATTGGATGAGGTGAGCGATCGCGGCATCACGTTCACCTATCTTCCTCTTAACGCCAGGCAGATGCTTGCTACT
GCGGGAACGGCAAACATTCC

Downstream 100 bases:

>100_bases
GATGGCATGAAGCGTATTTTTGCTGCGTCGGTGGCGGTAGTAAAAAAAACAGGCGGACAGGGATTTACCCTGGTGGAACT
GACCGTCGTCGTAGCCATCA

Product: type II and III secretion system protein

Products: NA

Alternate protein names: Pectic enzymes secretion protein outD [H]

Number of amino acids: Translated: 749; Mature: 749

Protein sequence:

>749_residues
MKTGKHVLLALVLAGIAGCATNNAFVEGKRLIAEGKLDTGLASLEQAARENPDNLEIRAVLARQREAIAARFVFEAEAAR
STGDLEAAERSFRRALEINPRHERALAGLEAINMDRRHTAAIKRAEELLERGEYAAASSEVRSVLQENPMQRDARRLIQR
ITEMEVQAAQAGPILKTAFKKPITLEFRDTGLKSVFEILARTGGINVVFDKDVKQDSKTTIFVRETNIEDVFKLLLVTNQ
LAHKVLNENSVLIYPNTPAKQKEYQELMVRSFFVTNTDVKQMVAMVKGLIKTKDMHVDEKLNLFVMKDTPEAIRLAERLV
TLNDLADPEVMLEVEVLEIGRNKLLNLGLQYPEKINVNYLTAASAAGAAPFPPFQISRAGVNGNGSNLDNLIGFVANPAL
IVNLKQQDGLINVLANPRIRVKNREKAKVLIGDKVPVVTTTAAANVGVASSVSYLDVGLKLDVESTISLQDEVSMKVSLE
VSNIVKEVPVTGGGLAYQVGTRTAATTLALKDGETQVLAGLISDDERTTLSKVPGLAELPWIGKLFINKNVVRNKTEIAL
LITPRIVRNIARPAKAVSEVPFGTENAIAVSPLMIGKVAPRALAMASSSPTSDANASRQWPSAPSREETRPPAPPEGAPV
ATLAAPEQVSAGQEFVVSVTLAGADALPPAELDLNYDPVALEPVDEGDKSGTRVLKLSKGGGAADVRFRILAQKPVTTQI
SIGNISFKDESGPLPVPVPLPPAVNVDIR

Sequences:

>Translated_749_residues
MKTGKHVLLALVLAGIAGCATNNAFVEGKRLIAEGKLDTGLASLEQAARENPDNLEIRAVLARQREAIAARFVFEAEAAR
STGDLEAAERSFRRALEINPRHERALAGLEAINMDRRHTAAIKRAEELLERGEYAAASSEVRSVLQENPMQRDARRLIQR
ITEMEVQAAQAGPILKTAFKKPITLEFRDTGLKSVFEILARTGGINVVFDKDVKQDSKTTIFVRETNIEDVFKLLLVTNQ
LAHKVLNENSVLIYPNTPAKQKEYQELMVRSFFVTNTDVKQMVAMVKGLIKTKDMHVDEKLNLFVMKDTPEAIRLAERLV
TLNDLADPEVMLEVEVLEIGRNKLLNLGLQYPEKINVNYLTAASAAGAAPFPPFQISRAGVNGNGSNLDNLIGFVANPAL
IVNLKQQDGLINVLANPRIRVKNREKAKVLIGDKVPVVTTTAAANVGVASSVSYLDVGLKLDVESTISLQDEVSMKVSLE
VSNIVKEVPVTGGGLAYQVGTRTAATTLALKDGETQVLAGLISDDERTTLSKVPGLAELPWIGKLFINKNVVRNKTEIAL
LITPRIVRNIARPAKAVSEVPFGTENAIAVSPLMIGKVAPRALAMASSSPTSDANASRQWPSAPSREETRPPAPPEGAPV
ATLAAPEQVSAGQEFVVSVTLAGADALPPAELDLNYDPVALEPVDEGDKSGTRVLKLSKGGGAADVRFRILAQKPVTTQI
SIGNISFKDESGPLPVPVPLPPAVNVDIR
>Mature_749_residues
MKTGKHVLLALVLAGIAGCATNNAFVEGKRLIAEGKLDTGLASLEQAARENPDNLEIRAVLARQREAIAARFVFEAEAAR
STGDLEAAERSFRRALEINPRHERALAGLEAINMDRRHTAAIKRAEELLERGEYAAASSEVRSVLQENPMQRDARRLIQR
ITEMEVQAAQAGPILKTAFKKPITLEFRDTGLKSVFEILARTGGINVVFDKDVKQDSKTTIFVRETNIEDVFKLLLVTNQ
LAHKVLNENSVLIYPNTPAKQKEYQELMVRSFFVTNTDVKQMVAMVKGLIKTKDMHVDEKLNLFVMKDTPEAIRLAERLV
TLNDLADPEVMLEVEVLEIGRNKLLNLGLQYPEKINVNYLTAASAAGAAPFPPFQISRAGVNGNGSNLDNLIGFVANPAL
IVNLKQQDGLINVLANPRIRVKNREKAKVLIGDKVPVVTTTAAANVGVASSVSYLDVGLKLDVESTISLQDEVSMKVSLE
VSNIVKEVPVTGGGLAYQVGTRTAATTLALKDGETQVLAGLISDDERTTLSKVPGLAELPWIGKLFINKNVVRNKTEIAL
LITPRIVRNIARPAKAVSEVPFGTENAIAVSPLMIGKVAPRALAMASSSPTSDANASRQWPSAPSREETRPPAPPEGAPV
ATLAAPEQVSAGQEFVVSVTLAGADALPPAELDLNYDPVALEPVDEGDKSGTRVLKLSKGGGAADVRFRILAQKPVTTQI
SIGNISFKDESGPLPVPVPLPPAVNVDIR

Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]

COG id: COG4796

COG function: function code U; Type II secretory pathway, component HofQ

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP D family [H]

Homologues:

Organism=Escherichia coli, GI1789793, Length=419, Percent_Identity=23.3890214797136, Blast_Score=85, Evalue=2e-17,
Organism=Escherichia coli, GI87082242, Length=293, Percent_Identity=29.0102389078498, Blast_Score=74, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001775
- InterPro:   IPR005644
- InterPro:   IPR004846
- InterPro:   IPR013356
- InterPro:   IPR004845 [H]

Pfam domain/function: PF00263 Secretin; PF03958 Secretin_N [H]

EC number: NA

Molecular weight: Translated: 80799; Mature: 80799

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTGKHVLLALVLAGIAGCATNNAFVEGKRLIAEGKLDTGLASLEQAARENPDNLEIRAV
CCCCHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCEEEHHH
LARQREAIAARFVFEAEAARSTGDLEAAERSFRRALEINPRHERALAGLEAINMDRRHTA
HHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
AIKRAEELLERGEYAAASSEVRSVLQENPMQRDARRLIQRITEMEVQAAQAGPILKTAFK
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
KPITLEFRDTGLKSVFEILARTGGINVVFDKDVKQDSKTTIFVRETNIEDVFKLLLVTNQ
CCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
LAHKVLNENSVLIYPNTPAKQKEYQELMVRSFFVTNTDVKQMVAMVKGLIKTKDMHVDEK
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
LNLFVMKDTPEAIRLAERLVTLNDLADPEVMLEVEVLEIGRNKLLNLGLQYPEKINVNYL
EEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHCCCCCCCCCCCEEE
TAASAAGAAPFPPFQISRAGVNGNGSNLDNLIGFVANPALIVNLKQQDGLINVLANPRIR
EECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEEECCCEEE
VKNREKAKVLIGDKVPVVTTTAAANVGVASSVSYLDVGLKLDVESTISLQDEVSMKVSLE
ECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCHHCCCCCCCEEEEEEE
VSNIVKEVPVTGGGLAYQVGTRTAATTLALKDGETQVLAGLISDDERTTLSKVPGLAELP
HHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCC
WIGKLFINKNVVRNKTEIALLITPRIVRNIARPAKAVSEVPFGTENAIAVSPLMIGKVAP
CHHHHEECCCHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCC
RALAMASSSPTSDANASRQWPSAPSREETRPPAPPEGAPVATLAAPEQVSAGQEFVVSVT
HHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCEEEEEEE
LAGADALPPAELDLNYDPVALEPVDEGDKSGTRVLKLSKGGGAADVRFRILAQKPVTTQI
EECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEE
SIGNISFKDESGPLPVPVPLPPAVNVDIR
EECCEEECCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKTGKHVLLALVLAGIAGCATNNAFVEGKRLIAEGKLDTGLASLEQAARENPDNLEIRAV
CCCCHHHHHHHHHHHHHHCCCCCCEECCCEEEECCCCCHHHHHHHHHHHCCCCCEEEHHH
LARQREAIAARFVFEAEAARSTGDLEAAERSFRRALEINPRHERALAGLEAINMDRRHTA
HHHHHHHHHHHHHEEHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
AIKRAEELLERGEYAAASSEVRSVLQENPMQRDARRLIQRITEMEVQAAQAGPILKTAFK
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC
KPITLEFRDTGLKSVFEILARTGGINVVFDKDVKQDSKTTIFVRETNIEDVFKLLLVTNQ
CCEEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHH
LAHKVLNENSVLIYPNTPAKQKEYQELMVRSFFVTNTDVKQMVAMVKGLIKTKDMHVDEK
HHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCC
LNLFVMKDTPEAIRLAERLVTLNDLADPEVMLEVEVLEIGRNKLLNLGLQYPEKINVNYL
EEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHCCHHHHHCCCCCCCCCCCEEE
TAASAAGAAPFPPFQISRAGVNGNGSNLDNLIGFVANPALIVNLKQQDGLINVLANPRIR
EECCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCEEEEEEECCCCEEEEECCCEEE
VKNREKAKVLIGDKVPVVTTTAAANVGVASSVSYLDVGLKLDVESTISLQDEVSMKVSLE
ECCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEEEEEEEECCHHCCCCCCCEEEEEEE
VSNIVKEVPVTGGGLAYQVGTRTAATTLALKDGETQVLAGLISDDERTTLSKVPGLAELP
HHHHHHHCCCCCCCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCHHHHHHCCCCCCCC
WIGKLFINKNVVRNKTEIALLITPRIVRNIARPAKAVSEVPFGTENAIAVSPLMIGKVAP
CHHHHEECCCHHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHCCC
RALAMASSSPTSDANASRQWPSAPSREETRPPAPPEGAPVATLAAPEQVSAGQEFVVSVT
HHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHCCCCEEEEEEE
LAGADALPPAELDLNYDPVALEPVDEGDKSGTRVLKLSKGGGAADVRFRILAQKPVTTQI
EECCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCEEEE
SIGNISFKDESGPLPVPVPLPPAVNVDIR
EECCEEECCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1429461 [H]