| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82703691
Identifier: 82703691
GI number: 82703691
Start: 2960852
End: 2962465
Strand: Reverse
Name: 82703691
Synonym: Nmul_A2576
Alternate gene names: NA
Gene position: 2962465-2960852 (Counterclockwise)
Preceding gene: 82703692
Following gene: 82703690
Centisome position: 93.04
GC content: 57.06
Gene sequence:
>1614_bases GTGCTGTCCCATTCGCACGTACAGGAACTGGTTCGGCTTGGTTTGATGTTGCAACTACTAAATAAGATGCTGCGGGTGGG AGGACTGCTTGGCCTCGCGGGCTGGATCCACTTGTCTCACGCGCAGGAAGCCCGTTTCGATGTATTCGAATATCGGCTGG AAGGTGCCACATTGCTGCCCGTCACAGTGGTGGAGCAGGCGGTTTATCCCCATCTCGGTGAAAGCAAGAGCCTGGAGGAC GTGGAGCGGGCACGCGATGCACTTGAGCGCGCCTATCATGAGGCGGGCTATCTGACCGTACTCGTGAGCATTCCTCAGCA GAAAGTCGATGAGGCGGTGGTCAGGCTGCAGGTGACCGAAGCCCCGGTAAAGCGTCTGCGCGTGGTGGAATCCCGCTATT TCAGTCCGGCGGATATCAAGGCGGCAATACCGGAACTGGCAGAAGGCAAAGTGCCTAACTTTCCCGAAATGCAGAAGCAG CTGGAAAGCCTGAACCGTTCAGCCGATCGCAGGATTACCCCGGTTTTAAGGGCAGGAAAGACACCCGGCACGGTCGAGGT GGATCTGAAAGTGAAGGATCAGTTGCCCCTTCATGGAAGCGTGGAGCTGAACAGCCGTCAGATTCCCAATACGACCTTGA CCCGGCTGAGCGCGAACCTGAGCTGGGACAATCTGTGGCACCGCCAGCACAGCCTGGGCGTGACAGGATTGGTTGCCCCC GAAAACCCGGATGAGAGCAAGGTCATTTCCGCCAATTACACTCTGCCGGTACCGTTCGGCGGTTTTCTCGCCTTATATAG CGTCTATTCCGCTTCGAACGTGGCTTCACTGGGCACGCTCAATGTGCTCGGCAATGGCCTGATCGTGGGAGGGCGCTACA TTCTGCCGCTGCCCGGAAGCGAAAAATTCTTCCACACAGCAACGCTGGGACTGGATTACAAGGATTTTACCCAAACGGTA AACCTCATCGATGGCGGCAATTTCAATACGCCAATCTCCTACCTTCCTTTCACTGTAGGCTGGGATGGAAGCTGGCTGGG AGAAGGAAGAACGACCAAGCTGGGATTGTCGGTGAATTTCCACGTGCGCGGACTGGTTGGGGATGAAGAGGAATTCGCGA ATAAGCGCTTTAAAGGCAGCGCTAATTACCTCTATCTGCGCGGCAATCTTTCACATACCGAAACATGGAGCCAGGGTTGG GGCGTGGCCGGCCGGGGCAGTTGGCAGATTGCAGCACAGCCGCTTATCGCGAATGAGCAGTCGATCGTGGGCGGCGTCAA TACCGTGCGCGGCTATCTGGAAGTCGCTGCCCTGGGCGACGACAGCGTTACGGGAGGGCTCGAGGTCTTTACGCCCAATT ACGCCACATACCTGCTCCAGGGACTGGACGAATTCCGTCTTCTGGCCTTTATTGATGCAGGAATCGTGCGAGTGCAGCAG CCCTTGCCCGGGCAGAAAGACCGCTTTGATCTTGCAGGTACCGGGATGGGTTTTCGTCTCAAGGGTTGGAAGGGCTTCTC GGCCGACGTGGCCTGGGCCGTGGCACTCGAAGAAGTTGGAAGAACAAAGGCGGGAGACAAGCGCGTGCACTTTCTTTTTC GGCACGCGTGGTGA
Upstream 100 bases:
>100_bases CGCACGTCTCGGCAATTCCTGCCAGCCTGCGGTCCAGTAGGCATTGCGCTAACGGACGGTGCAATGCCGTCCATATATGC TGCTCGGGACAGCTCCTTCG
Downstream 100 bases:
>100_bases TCATGCCTGCTGTCGTAACGATCCGCATAACCGTATAGCGAATGATTTTTCTGAAGCAAGGTTGAGGAATAACCTATTGC CGCCATGCTCGGCAGTATGA
Product: hemolysin activation/secretion protein
Products: NA
Alternate protein names: Polypeptide-Transport-Associated Domain-Containing Protein; Surface Antigen; Outer Membrane Protein; Polypeptide-Transport-Associated Domain Protein ShlB-Type; Exported Surface Antigen Protein; Hemolysin Activator HlyB Domain-Containing Protein; Signal Peptide; POTRA Domain ShlB-Type Family; OMP85 Family Outer Membrane Protein
Number of amino acids: Translated: 537; Mature: 537
Protein sequence:
>537_residues MLSHSHVQELVRLGLMLQLLNKMLRVGGLLGLAGWIHLSHAQEARFDVFEYRLEGATLLPVTVVEQAVYPHLGESKSLED VERARDALERAYHEAGYLTVLVSIPQQKVDEAVVRLQVTEAPVKRLRVVESRYFSPADIKAAIPELAEGKVPNFPEMQKQ LESLNRSADRRITPVLRAGKTPGTVEVDLKVKDQLPLHGSVELNSRQIPNTTLTRLSANLSWDNLWHRQHSLGVTGLVAP ENPDESKVISANYTLPVPFGGFLALYSVYSASNVASLGTLNVLGNGLIVGGRYILPLPGSEKFFHTATLGLDYKDFTQTV NLIDGGNFNTPISYLPFTVGWDGSWLGEGRTTKLGLSVNFHVRGLVGDEEEFANKRFKGSANYLYLRGNLSHTETWSQGW GVAGRGSWQIAAQPLIANEQSIVGGVNTVRGYLEVAALGDDSVTGGLEVFTPNYATYLLQGLDEFRLLAFIDAGIVRVQQ PLPGQKDRFDLAGTGMGFRLKGWKGFSADVAWAVALEEVGRTKAGDKRVHFLFRHAW
Sequences:
>Translated_537_residues MLSHSHVQELVRLGLMLQLLNKMLRVGGLLGLAGWIHLSHAQEARFDVFEYRLEGATLLPVTVVEQAVYPHLGESKSLED VERARDALERAYHEAGYLTVLVSIPQQKVDEAVVRLQVTEAPVKRLRVVESRYFSPADIKAAIPELAEGKVPNFPEMQKQ LESLNRSADRRITPVLRAGKTPGTVEVDLKVKDQLPLHGSVELNSRQIPNTTLTRLSANLSWDNLWHRQHSLGVTGLVAP ENPDESKVISANYTLPVPFGGFLALYSVYSASNVASLGTLNVLGNGLIVGGRYILPLPGSEKFFHTATLGLDYKDFTQTV NLIDGGNFNTPISYLPFTVGWDGSWLGEGRTTKLGLSVNFHVRGLVGDEEEFANKRFKGSANYLYLRGNLSHTETWSQGW GVAGRGSWQIAAQPLIANEQSIVGGVNTVRGYLEVAALGDDSVTGGLEVFTPNYATYLLQGLDEFRLLAFIDAGIVRVQQ PLPGQKDRFDLAGTGMGFRLKGWKGFSADVAWAVALEEVGRTKAGDKRVHFLFRHAW >Mature_537_residues MLSHSHVQELVRLGLMLQLLNKMLRVGGLLGLAGWIHLSHAQEARFDVFEYRLEGATLLPVTVVEQAVYPHLGESKSLED VERARDALERAYHEAGYLTVLVSIPQQKVDEAVVRLQVTEAPVKRLRVVESRYFSPADIKAAIPELAEGKVPNFPEMQKQ LESLNRSADRRITPVLRAGKTPGTVEVDLKVKDQLPLHGSVELNSRQIPNTTLTRLSANLSWDNLWHRQHSLGVTGLVAP ENPDESKVISANYTLPVPFGGFLALYSVYSASNVASLGTLNVLGNGLIVGGRYILPLPGSEKFFHTATLGLDYKDFTQTV NLIDGGNFNTPISYLPFTVGWDGSWLGEGRTTKLGLSVNFHVRGLVGDEEEFANKRFKGSANYLYLRGNLSHTETWSQGW GVAGRGSWQIAAQPLIANEQSIVGGVNTVRGYLEVAALGDDSVTGGLEVFTPNYATYLLQGLDEFRLLAFIDAGIVRVQQ PLPGQKDRFDLAGTGMGFRLKGWKGFSADVAWAVALEEVGRTKAGDKRVHFLFRHAW
Specific function: Unknown
COG id: COG2831
COG function: function code U; Hemolysin activation/secretion protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59094; Mature: 59094
Theoretical pI: Translated: 7.07; Mature: 7.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSHSHVQELVRLGLMLQLLNKMLRVGGLLGLAGWIHLSHAQEARFDVFEYRLEGATLLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHEEEEECCCEEEH VTVVEQAVYPHLGESKSLEDVERARDALERAYHEAGYLTVLVSIPQQKVDEAVVRLQVTE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHEEEEECH APVKRLRVVESRYFSPADIKAAIPELAEGKVPNFPEMQKQLESLNRSADRRITPVLRAGK HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC TPGTVEVDLKVKDQLPLHGSVELNSRQIPNTTLTRLSANLSWDNLWHRQHSLGVTGLVAP CCCEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHEECCCCHHHHHHHHHCCCEEEEECC ENPDESKVISANYTLPVPFGGFLALYSVYSASNVASLGTLNVLGNGLIVGGRYILPLPGS CCCCCCCEEEECEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCEEECCEEEEECCCC EKFFHTATLGLDYKDFTQTVNLIDGGNFNTPISYLPFTVGWDGSWLGEGRTTKLGLSVNF CCEEEEEEECCCHHHHHHEEEEEECCCCCCCCEECCEEECCCCCCCCCCCEEEEEEEEEE HVRGLVGDEEEFANKRFKGSANYLYLRGNLSHTETWSQGWGVAGRGSWQIAAQPLIANEQ EEEEECCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCEEEEECCEECCCC SIVGGVNTVRGYLEVAALGDDSVTGGLEVFTPNYATYLLQGLDEFRLLAFIDAGIVRVQQ HHHCCHHHHHEEEEEEEECCCCCCCCEEEECCCHHHHHHHCHHHHHHHHHHHHCCEEEEC PLPGQKDRFDLAGTGMGFRLKGWKGFSADVAWAVALEEVGRTKAGDKRVHFLFRHAW CCCCCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECC >Mature Secondary Structure MLSHSHVQELVRLGLMLQLLNKMLRVGGLLGLAGWIHLSHAQEARFDVFEYRLEGATLLP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHEEEEECCCEEEH VTVVEQAVYPHLGESKSLEDVERARDALERAYHEAGYLTVLVSIPQQKVDEAVVRLQVTE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHEEEEECH APVKRLRVVESRYFSPADIKAAIPELAEGKVPNFPEMQKQLESLNRSADRRITPVLRAGK HHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCC TPGTVEVDLKVKDQLPLHGSVELNSRQIPNTTLTRLSANLSWDNLWHRQHSLGVTGLVAP CCCEEEEEEEEECCCCCCCEEEECCCCCCCHHHHHEECCCCHHHHHHHHHCCCEEEEECC ENPDESKVISANYTLPVPFGGFLALYSVYSASNVASLGTLNVLGNGLIVGGRYILPLPGS CCCCCCCEEEECEEECCCCHHHHHHHHHHHCCCCCCCCCCEECCCCEEECCEEEEECCCC EKFFHTATLGLDYKDFTQTVNLIDGGNFNTPISYLPFTVGWDGSWLGEGRTTKLGLSVNF CCEEEEEEECCCHHHHHHEEEEEECCCCCCCCEECCEEECCCCCCCCCCCEEEEEEEEEE HVRGLVGDEEEFANKRFKGSANYLYLRGNLSHTETWSQGWGVAGRGSWQIAAQPLIANEQ EEEEECCCHHHHHCCCCCCCCCEEEEECCCCCCCCHHHCCCCCCCCCEEEEECCEECCCC SIVGGVNTVRGYLEVAALGDDSVTGGLEVFTPNYATYLLQGLDEFRLLAFIDAGIVRVQQ HHHCCHHHHHEEEEEEEECCCCCCCCEEEECCCHHHHHHHCHHHHHHHHHHHHCCEEEEC PLPGQKDRFDLAGTGMGFRLKGWKGFSADVAWAVALEEVGRTKAGDKRVHFLFRHAW CCCCCCCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA