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The map label for this gene is xerC [H]

Identifier: 82703659

GI number: 82703659

Start: 2912837

End: 2913793

Strand: Direct

Name: xerC [H]

Synonym: Nmul_A2544

Alternate gene names: 82703659

Gene position: 2912837-2913793 (Clockwise)

Preceding gene: 82703658

Following gene: 82703660

Centisome position: 91.48

GC content: 57.05

Gene sequence:

>957_bases
ATGGGAAAGGAGCAACACCCGGAATCCCTAACCGGTCTGAGCGATCCCGGCAAGATGCCCGAAAAGGGGCAGGCCGAACT
TGCCTCCGCCTATCTCGCTTATCTTTCCGTCACGCGGCGACTGTCGCCGCTTACCTGCGAAAGTTATGGCCGCGATCTCG
ATGTACTGATGAATCTCTCGCGGGGAATCGCGCTGGAGCATTTGCAAATCCATCATATCCGGCGTTTTCTTGCTCAGTTG
CATGCAAACGGATTTTCCGGCAGGAGCCTGGCGAGAATGCTGTCTGCATGGCGAGGGCTCTACAATTACCTGGCGCGACA
TCATGGTTACGCGTGTAACCCCTGCGCCGGGGTGCGGGCGCCGAAGTCCCCCAGGAGCCTGCCTCGCACCCTGTCCCCTG
ATGAGGCCTTGAAGCTGCTGGAGTTTGATACTCCCGATCTGGTTGCCTTACGCGATAAAGCCATGTTCGAACTCTGCTAT
TCTTCGGGATTGCGGCTGGCGGAACTCGCGAACCTGAAGCCGGAGGATTTAAGTCTGGCGGAGGGGATCGTGCGCGTTAC
CGGCAAAGGGAATAAAACGCGGGATGTGCCGGTAGGAAGCAAAGCCATGCAAGTAGTGAGGGAATGGATAAAACAACGCG
CCACGCTCGCCAAGCCAGGGGAAACAGGTCTATTCCTGTCCCGCCACGGGAGGAATATCAGTCGCCGGTCGATCGATCAG
CGTCTGAAAATCCAGGCAGTAAAGCAAGGAATCAGCGGACGCATCCACCCGCACGTGCTGCGGCATTCATTTGCATCACA
TGTACTGCAATCCAGCGGCAACCTGAGAGCGGTGCAGGAGATGCTGGGGCATGCCAGCATCAGCACCACGCAGGTATATA
CCCATCTCGACTTCCAGCATCTATCGAAGGTCTATGATGCGACCCACCCCCGCGCACGAAAGAAGAAAGAGTCTTGA

Upstream 100 bases:

>100_bases
AAGAATCGCAGAGGTTCTATCCGGAGATGGGAACAGTTTACCTTGGGCGACTCGGTGAACTTGCCAGTGCGTCATTGAAA
CGTTTTCGCACGGCCTGAGA

Downstream 100 bases:

>100_bases
GTCGCAAAGATGAACCGGACTACGGATTGGTACAAACACTGTTTGCATGCTTCGCGCGAATCGGCGTTATAATCTTCGCT
CTCCAATTACCGGGCTAGAC

Product: tyrosine recombinase XerC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MGKEQHPESLTGLSDPGKMPEKGQAELASAYLAYLSVTRRLSPLTCESYGRDLDVLMNLSRGIALEHLQIHHIRRFLAQL
HANGFSGRSLARMLSAWRGLYNYLARHHGYACNPCAGVRAPKSPRSLPRTLSPDEALKLLEFDTPDLVALRDKAMFELCY
SSGLRLAELANLKPEDLSLAEGIVRVTGKGNKTRDVPVGSKAMQVVREWIKQRATLAKPGETGLFLSRHGRNISRRSIDQ
RLKIQAVKQGISGRIHPHVLRHSFASHVLQSSGNLRAVQEMLGHASISTTQVYTHLDFQHLSKVYDATHPRARKKKES

Sequences:

>Translated_318_residues
MGKEQHPESLTGLSDPGKMPEKGQAELASAYLAYLSVTRRLSPLTCESYGRDLDVLMNLSRGIALEHLQIHHIRRFLAQL
HANGFSGRSLARMLSAWRGLYNYLARHHGYACNPCAGVRAPKSPRSLPRTLSPDEALKLLEFDTPDLVALRDKAMFELCY
SSGLRLAELANLKPEDLSLAEGIVRVTGKGNKTRDVPVGSKAMQVVREWIKQRATLAKPGETGLFLSRHGRNISRRSIDQ
RLKIQAVKQGISGRIHPHVLRHSFASHVLQSSGNLRAVQEMLGHASISTTQVYTHLDFQHLSKVYDATHPRARKKKES
>Mature_317_residues
GKEQHPESLTGLSDPGKMPEKGQAELASAYLAYLSVTRRLSPLTCESYGRDLDVLMNLSRGIALEHLQIHHIRRFLAQLH
ANGFSGRSLARMLSAWRGLYNYLARHHGYACNPCAGVRAPKSPRSLPRTLSPDEALKLLEFDTPDLVALRDKAMFELCYS
SGLRLAELANLKPEDLSLAEGIVRVTGKGNKTRDVPVGSKAMQVVREWIKQRATLAKPGETGLFLSRHGRNISRRSIDQR
LKIQAVKQGISGRIHPHVLRHSFASHVLQSSGNLRAVQEMLGHASISTTQVYTHLDFQHLSKVYDATHPRARKKKES

Specific function: Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The xerC-xerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell div

COG id: COG4973

COG function: function code L; Site-specific recombinase XerC

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family. XerC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=289, Percent_Identity=45.3287197231834, Blast_Score=261, Evalue=5e-71,
Organism=Escherichia coli, GI1789261, Length=294, Percent_Identity=38.0952380952381, Blast_Score=185, Evalue=4e-48,
Organism=Escherichia coli, GI1790768, Length=171, Percent_Identity=28.0701754385965, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790767, Length=185, Percent_Identity=27.5675675675676, Blast_Score=75, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107
- InterPro:   IPR011931 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 35459; Mature: 35328

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKEQHPESLTGLSDPGKMPEKGQAELASAYLAYLSVTRRLSPLTCESYGRDLDVLMNLS
CCCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH
RGIALEHLQIHHIRRFLAQLHANGFSGRSLARMLSAWRGLYNYLARHHGYACNPCAGVRA
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PKSPRSLPRTLSPDEALKLLEFDTPDLVALRDKAMFELCYSSGLRLAELANLKPEDLSLA
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH
EGIVRVTGKGNKTRDVPVGSKAMQVVREWIKQRATLAKPGETGLFLSRHGRNISRRSIDQ
HHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
RLKIQAVKQGISGRIHPHVLRHSFASHVLQSSGNLRAVQEMLGHASISTTQVYTHLDFQH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCHHH
LSKVYDATHPRARKKKES
HHHHHHCCCCHHHCCCCC
>Mature Secondary Structure 
GKEQHPESLTGLSDPGKMPEKGQAELASAYLAYLSVTRRLSPLTCESYGRDLDVLMNLS
CCCCCCCHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCHHHHHHHH
RGIALEHLQIHHIRRFLAQLHANGFSGRSLARMLSAWRGLYNYLARHHGYACNPCAGVRA
CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PKSPRSLPRTLSPDEALKLLEFDTPDLVALRDKAMFELCYSSGLRLAELANLKPEDLSLA
CCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHH
EGIVRVTGKGNKTRDVPVGSKAMQVVREWIKQRATLAKPGETGLFLSRHGRNISRRSIDQ
HHHEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHH
RLKIQAVKQGISGRIHPHVLRHSFASHVLQSSGNLRAVQEMLGHASISTTQVYTHLDFQH
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCHHH
LSKVYDATHPRARKKKES
HHHHHHCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA