| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is yjeS [H]
Identifier: 82703645
GI number: 82703645
Start: 2896788
End: 2897945
Strand: Reverse
Name: yjeS [H]
Synonym: Nmul_A2530
Alternate gene names: 82703645
Gene position: 2897945-2896788 (Counterclockwise)
Preceding gene: 82703648
Following gene: 82703644
Centisome position: 91.01
GC content: 55.79
Gene sequence:
>1158_bases ATGCGCAAAGACGATCCCTCCACCGAACTATCTCCGGAACCTTTGAAAGATCTTTCTGACTCTACTGTCGATCTTCCGCA ACTTGCCAGGTCCATCAAGGAATGGGGGGAGAAGCTCGGTTTTCAGAAGGTTTCCATTGTCGATGCAGGCGCGGACATGA GGCGGGCGGAGACAGGCCTGTTCGAATGGCTGGACCAGGGTTGTCACGGGGAGATGGATTATATGGCAAGACACGGCACC CGGCGTACTCGTCCTGCCGAACTCGTTCCCGGGACGCTGCGGGTGATCTCTGTGCGCATGAATTATATGCCGATCGCACG GGACAGCTGGCAGGTGATCCAGGACGGGACCCGTGCGTTCATCTCGCGCTATGCTCTGGGTCGGGATTACCACAAGGTGC TGCGCGGGCGCTTGCAAAAACTTGCGGAAAAAATCGAAGCGGAAACAGGATGCCTGAATTACCGTGTATTCAGCGACAGC GCGCCGGTAATGGAAGTTGAATGGGCGCAAAAATCGGGCCTGGGCTGGCGCGGAAAGCATACGCTGCTGCTTTCCCGTGA CGCGGGATCCCTGTTCTTTCTGGGCGAGTTGTTTACGGATCTGCCACTGCCCGTGGACCAACCCGCAGCCAATTACTGCG GGAGTTGCACGAGGTGCATCGACATCTGCCCGACCCGAGCGATCATAGCGCCCTATCGGCTGGATGCGCGACGTTGTATT TCTTATCTTACTATTGAACATAAAGGCAGTATTCCCGAACCATTACGGCCTTTGATCGGTAATCGGGTATATGGCTGCGA TGATTGTCAGCTCGTCTGCCCCTGGAACAAATTTGCGGTAATTACCAATGAAGATGATTTTTCCGTGCGGAACGGCCTGG ATAGCGCGTCTCTGATCGAACTGTTCGGATGGAGCAGTGAGGAGTTCGAGGCACGGCTTGCCGGAAGTCCGATTCGGCGA ATCGGACATGAGCAATGGCTGCGCAACCTGGCCGTCGGCTTGGGGAATGCGCCGTTCTCCCAATCTGTCGTTCAGGCGCT GCGAGCGCGACTCGATGATGCTTCCCCTCTGATACGCGAACACGTACGCTGGGCGTTGCATCAGCAGGAGCGTCCTTTAT CGTTTTTTATCGAAGATGCGGCGATCCCGAAAAAATAA
Upstream 100 bases:
>100_bases CAGTTCCAAGTGCCAGGGTAGCGGTTTCATCAGCGAGATGGCAGGTCTGGTGAAGAGCTATCAAGGTGATGAAGGGCGGC AGACCCGGTATGATGTGAAT
Downstream 100 bases:
>100_bases TTTGAGTTTTGTACGGAATTTAACATACTGTGCCATAAGGGTGTACTAAAGTCCAATTCGCTCCCGCTCCTCAAGTTGAT AGGATGCGAGGCATGTTCCA
Product: 4Fe-4S cluster binding
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 385
Protein sequence:
>385_residues MRKDDPSTELSPEPLKDLSDSTVDLPQLARSIKEWGEKLGFQKVSIVDAGADMRRAETGLFEWLDQGCHGEMDYMARHGT RRTRPAELVPGTLRVISVRMNYMPIARDSWQVIQDGTRAFISRYALGRDYHKVLRGRLQKLAEKIEAETGCLNYRVFSDS APVMEVEWAQKSGLGWRGKHTLLLSRDAGSLFFLGELFTDLPLPVDQPAANYCGSCTRCIDICPTRAIIAPYRLDARRCI SYLTIEHKGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAVITNEDDFSVRNGLDSASLIELFGWSSEEFEARLAGSPIRR IGHEQWLRNLAVGLGNAPFSQSVVQALRARLDDASPLIREHVRWALHQQERPLSFFIEDAAIPKK
Sequences:
>Translated_385_residues MRKDDPSTELSPEPLKDLSDSTVDLPQLARSIKEWGEKLGFQKVSIVDAGADMRRAETGLFEWLDQGCHGEMDYMARHGT RRTRPAELVPGTLRVISVRMNYMPIARDSWQVIQDGTRAFISRYALGRDYHKVLRGRLQKLAEKIEAETGCLNYRVFSDS APVMEVEWAQKSGLGWRGKHTLLLSRDAGSLFFLGELFTDLPLPVDQPAANYCGSCTRCIDICPTRAIIAPYRLDARRCI SYLTIEHKGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAVITNEDDFSVRNGLDSASLIELFGWSSEEFEARLAGSPIRR IGHEQWLRNLAVGLGNAPFSQSVVQALRARLDDASPLIREHVRWALHQQERPLSFFIEDAAIPKK >Mature_385_residues MRKDDPSTELSPEPLKDLSDSTVDLPQLARSIKEWGEKLGFQKVSIVDAGADMRRAETGLFEWLDQGCHGEMDYMARHGT RRTRPAELVPGTLRVISVRMNYMPIARDSWQVIQDGTRAFISRYALGRDYHKVLRGRLQKLAEKIEAETGCLNYRVFSDS APVMEVEWAQKSGLGWRGKHTLLLSRDAGSLFFLGELFTDLPLPVDQPAANYCGSCTRCIDICPTRAIIAPYRLDARRCI SYLTIEHKGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAVITNEDDFSVRNGLDSASLIELFGWSSEEFEARLAGSPIRR IGHEQWLRNLAVGLGNAPFSQSVVQALRARLDDASPLIREHVRWALHQQERPLSFFIEDAAIPKK
Specific function: Unknown
COG id: COG1600
COG function: function code C; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1790608, Length=363, Percent_Identity=56.4738292011019, Blast_Score=431, Evalue=1e-122,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004453 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013542 - InterPro: IPR009051 [H]
Pfam domain/function: PF08331 DUF1730 [H]
EC number: NA
Molecular weight: Translated: 43487; Mature: 43487
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDDPSTELSPEPLKDLSDSTVDLPQLARSIKEWGEKLGFQKVSIVDAGADMRRAETGL CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH FEWLDQGCHGEMDYMARHGTRRTRPAELVPGTLRVISVRMNYMPIARDSWQVIQDGTRAF HHHHHCCCCCCHHHHHHCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH ISRYALGRDYHKVLRGRLQKLAEKIEAETGCLNYRVFSDSAPVMEVEWAQKSGLGWRGKH HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECHHHCCCCCCCCE TLLLSRDAGSLFFLGELFTDLPLPVDQPAANYCGSCTRCIDICPTRAIIAPYRLDARRCI EEEEECCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCHHCHHHHH SYLTIEHKGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAVITNEDDFSVRNGLDSASLIE HHHEEECCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCHHHCCCCHHHHHH LFGWSSEEFEARLAGSPIRRIGHEQWLRNLAVGLGNAPFSQSVVQALRARLDDASPLIRE HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH HVRWALHQQERPLSFFIEDAAIPKK HHHHHHHHCCCCCEEEEECCCCCCC >Mature Secondary Structure MRKDDPSTELSPEPLKDLSDSTVDLPQLARSIKEWGEKLGFQKVSIVDAGADMRRAETGL CCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHH FEWLDQGCHGEMDYMARHGTRRTRPAELVPGTLRVISVRMNYMPIARDSWQVIQDGTRAF HHHHHCCCCCCHHHHHHCCCCCCCCHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHH ISRYALGRDYHKVLRGRLQKLAEKIEAETGCLNYRVFSDSAPVMEVEWAQKSGLGWRGKH HHHHHHCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCEEEEECHHHCCCCCCCCE TLLLSRDAGSLFFLGELFTDLPLPVDQPAANYCGSCTRCIDICPTRAIIAPYRLDARRCI EEEEECCCCCEEEHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCHHCHHHHH SYLTIEHKGSIPEPLRPLIGNRVYGCDDCQLVCPWNKFAVITNEDDFSVRNGLDSASLIE HHHEEECCCCCCHHHHHHHCCCCCCCCCCEEEECCCCEEEEECCCCCHHHCCCCHHHHHH LFGWSSEEFEARLAGSPIRRIGHEQWLRNLAVGLGNAPFSQSVVQALRARLDDASPLIRE HHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHH HVRWALHQQERPLSFFIEDAAIPKK HHHHHHHHCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]