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The map label for this gene is yubM [H]

Identifier: 82703580

GI number: 82703580

Start: 2814268

End: 2816244

Strand: Reverse

Name: yubM [H]

Synonym: Nmul_A2465

Alternate gene names: 82703580

Gene position: 2816244-2814268 (Counterclockwise)

Preceding gene: 82703581

Following gene: 82703576

Centisome position: 88.44

GC content: 57.46

Gene sequence:

>1977_bases
ATGATGGAAACCATCGAAACCGGTCTTGTCCGCATTCCGATAAAAAAACTTGTCATCTCCCCCCTGAATGTTCGCAAGAA
GCAGGGAACCGGCATCGAAGAATTGGCCGCTCTGATCGCTTCGCAGGGATTGATCCACAACCTGGTCGTTACCGTGCAGC
AGAAAAAGGGCAGGAAAAGCGGCAAGTATGAAGTGATTGCCGGCGGCCGCAGGCTGGCCGCCTTGAACCTGCTGGTAGCC
GATAGGCGCCTGTCGAAAGACCATGAGGTGGATTGCCGGGTGGTCGAGCACAAAGAGGCGCTGGAAATAAGCCTGTCCGA
GAACAGTGGGCGGGAGCACATGCATCCTGCCGATCTCGTTATGGCCTATCGCAGCCTGATAGATGCGGGATTTGCGCTGG
ATGAGATTGCCCCGCGCTTTGGCGTCTCTCCGCTGACCGTCAGGCGTTACCTCAAGCTGACCAAGGTCTCCCCCAGGATT
TTCGCGCTGTATGCCGAAGACAGGATGAGCTTCGAGCAGATAACAGCCTTGGCGCTCACCGACGACCACGAATTGCAGGA
GCGGCTCTGGGACAACACGCCGGAATACCAGCGCAACGGCGCAACCTTCCGGCGGCTCATCACCGAAACCGAGATCAACA
TAAGGACGAGCCCGCTTGCCAGATTCGTCGGAGTAGAGGAATACGAGGCCGCAGGAGGCGTGATACGTCGTGATCTTTTC
GGGGAGGAGGACGACGGTTATATGCAGGATGCTGAATTGCTCGAGTCGCTTGCCCTGGAGAAACTCAATCAGGCGGTCGA
GCCGCTGAAGGAGAAAGGATATGCGTGGGTACAGGTTCGCACCACCTTCGACTATTCAGACAGGGCCGAATTCTCGCAGA
TGCGGATAGTCAGACGCGAGCCGACTTCGGCGGAGCAGGCCAGGATGGATGCGCTGGAAGCGGAACTGGAAGCCATCGAG
GCCGGATATGATGGATCCGATGAGGAGCGGGGCAGCACAGGAGAACTCTACAAATCAATAGAGAAAAAGAAAAAAGCGGA
GCGCATTCGGGACGAACTGACGAAGCTTGCCGAATCGCTGGAGGAAATTTATCCGGACGATCTTGCAATTGCAGGAGCCA
TTGCCACCGTCGACCACGAAGGCAAGCTCCGTATCGAGCGGGGCCTCATCCGCAAGGAGGACATGAGGAAGCAACCGAAG
GAATCAAAGGAATCAAAAGAACCAAGGGAATCGAGGGAACAAAATGAACCGGGAGAGTCAGGGGAGCGGGAAGCGGCAGC
GATTGAAGGAGCCGGTGGCGAGAAGCCGGTCCATTCGGAGAAGCTGACCCGCATGCTGACCGTGCATCGCACGGCCGCCG
TGCAGGCAGCCATGACGAACCGGCCGGAAGTTGCGCTCGCCGCCCTCGTGCACCGGATGGCGGTACAGATTTTCTCAAAT
GATTCCGCGTCAAATCCTGTCCTGCAGATCAGCATCGAGGAAACCCGTGTCAAGCCGGATGCGGAGGGTATTGAGCAGAG
CAAGGCAGCGACCGCACTTGCAAAAAAGCGCCGGCAATGGCAGAAGCGTATCGATGCGGCAGGGCGGGGCGGCATGACCC
TGTTTGGGTGGCTACTGGAGCAGTCGCAGCAAGACCTTCTGGATCTGCTGGCTTTCTGCACGGCGGTTTCGGTCAATACG
GTGTCGGAACGGGAAAGCACACCGCCACAGGATGTAACTGCACTCATGACCGCCTTGAATCTGGACATGGCCGACTGGTG
GGAAGCGACAGGGGAGAGCTATTTGTCCCACGTCAGCAAAGACCGGCTCCTTGCGATTGTGGCGCAAGCGGTTTCGCCCG
AACATGCACGGAGCATGAATGGACTCAAGAAAGGCGACCTGGTGCGGCAGGCGGAGCAGGTACTATCCGGCATAAAGTGG
TTGCCGGATCATTTCAAAGTCACTAAAACCCGCACGGGCAAACAAAGTGACGCGTAG

Upstream 100 bases:

>100_bases
CATTCCTTTTGCCGAAGCTCATTAATGCCGAGCCAGTGCTTGATAACACTGATACCACCGGCTTTTCTTTTCCGTTTTAT
TAAGCATTCCTAGGAGAACC

Downstream 100 bases:

>100_bases
ATTGCCTTTTGCCGGTTATTTGTGATGCGCCTGTGCATCCAGGGCTTTCCTGATGGTTTTTGCCAGATCGGCTGCATTGC
CTTTGCCCCAGTAGTGCATG

Product: ParB-like nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MMETIETGLVRIPIKKLVISPLNVRKKQGTGIEELAALIASQGLIHNLVVTVQQKKGRKSGKYEVIAGGRRLAALNLLVA
DRRLSKDHEVDCRVVEHKEALEISLSENSGREHMHPADLVMAYRSLIDAGFALDEIAPRFGVSPLTVRRYLKLTKVSPRI
FALYAEDRMSFEQITALALTDDHELQERLWDNTPEYQRNGATFRRLITETEINIRTSPLARFVGVEEYEAAGGVIRRDLF
GEEDDGYMQDAELLESLALEKLNQAVEPLKEKGYAWVQVRTTFDYSDRAEFSQMRIVRREPTSAEQARMDALEAELEAIE
AGYDGSDEERGSTGELYKSIEKKKKAERIRDELTKLAESLEEIYPDDLAIAGAIATVDHEGKLRIERGLIRKEDMRKQPK
ESKESKEPRESREQNEPGESGEREAAAIEGAGGEKPVHSEKLTRMLTVHRTAAVQAAMTNRPEVALAALVHRMAVQIFSN
DSASNPVLQISIEETRVKPDAEGIEQSKAATALAKKRRQWQKRIDAAGRGGMTLFGWLLEQSQQDLLDLLAFCTAVSVNT
VSERESTPPQDVTALMTALNLDMADWWEATGESYLSHVSKDRLLAIVAQAVSPEHARSMNGLKKGDLVRQAEQVLSGIKW
LPDHFKVTKTRTGKQSDA

Sequences:

>Translated_658_residues
MMETIETGLVRIPIKKLVISPLNVRKKQGTGIEELAALIASQGLIHNLVVTVQQKKGRKSGKYEVIAGGRRLAALNLLVA
DRRLSKDHEVDCRVVEHKEALEISLSENSGREHMHPADLVMAYRSLIDAGFALDEIAPRFGVSPLTVRRYLKLTKVSPRI
FALYAEDRMSFEQITALALTDDHELQERLWDNTPEYQRNGATFRRLITETEINIRTSPLARFVGVEEYEAAGGVIRRDLF
GEEDDGYMQDAELLESLALEKLNQAVEPLKEKGYAWVQVRTTFDYSDRAEFSQMRIVRREPTSAEQARMDALEAELEAIE
AGYDGSDEERGSTGELYKSIEKKKKAERIRDELTKLAESLEEIYPDDLAIAGAIATVDHEGKLRIERGLIRKEDMRKQPK
ESKESKEPRESREQNEPGESGEREAAAIEGAGGEKPVHSEKLTRMLTVHRTAAVQAAMTNRPEVALAALVHRMAVQIFSN
DSASNPVLQISIEETRVKPDAEGIEQSKAATALAKKRRQWQKRIDAAGRGGMTLFGWLLEQSQQDLLDLLAFCTAVSVNT
VSERESTPPQDVTALMTALNLDMADWWEATGESYLSHVSKDRLLAIVAQAVSPEHARSMNGLKKGDLVRQAEQVLSGIKW
LPDHFKVTKTRTGKQSDA
>Mature_658_residues
MMETIETGLVRIPIKKLVISPLNVRKKQGTGIEELAALIASQGLIHNLVVTVQQKKGRKSGKYEVIAGGRRLAALNLLVA
DRRLSKDHEVDCRVVEHKEALEISLSENSGREHMHPADLVMAYRSLIDAGFALDEIAPRFGVSPLTVRRYLKLTKVSPRI
FALYAEDRMSFEQITALALTDDHELQERLWDNTPEYQRNGATFRRLITETEINIRTSPLARFVGVEEYEAAGGVIRRDLF
GEEDDGYMQDAELLESLALEKLNQAVEPLKEKGYAWVQVRTTFDYSDRAEFSQMRIVRREPTSAEQARMDALEAELEAIE
AGYDGSDEERGSTGELYKSIEKKKKAERIRDELTKLAESLEEIYPDDLAIAGAIATVDHEGKLRIERGLIRKEDMRKQPK
ESKESKEPRESREQNEPGESGEREAAAIEGAGGEKPVHSEKLTRMLTVHRTAAVQAAMTNRPEVALAALVHRMAVQIFSN
DSASNPVLQISIEETRVKPDAEGIEQSKAATALAKKRRQWQKRIDAAGRGGMTLFGWLLEQSQQDLLDLLAFCTAVSVNT
VSERESTPPQDVTALMTALNLDMADWWEATGESYLSHVSKDRLLAIVAQAVSPEHARSMNGLKKGDLVRQAEQVLSGIKW
LPDHFKVTKTRTGKQSDA

Specific function: Unknown

COG id: COG1475

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004437
- InterPro:   IPR003115 [H]

Pfam domain/function: PF02195 ParBc [H]

EC number: NA

Molecular weight: Translated: 73600; Mature: 73600

Theoretical pI: Translated: 5.65; Mature: 5.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMETIETGLVRIPIKKLVISPLNVRKKQGTGIEELAALIASQGLIHNLVVTVQQKKGRKS
CCCCHHCCCEEECHHHHHHCCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEHHCCCCC
GKYEVIAGGRRLAALNLLVADRRLSKDHEVDCRVVEHKEALEISLSENSGREHMHPADLV
CCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHH
MAYRSLIDAGFALDEIAPRFGVSPLTVRRYLKLTKVSPRIFALYAEDRMSFEQITALALT
HHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHCC
DDHELQERLWDNTPEYQRNGATFRRLITETEINIRTSPLARFVGVEEYEAAGGVIRRDLF
CCHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEECCHHHHHHCCHHHHHHCCHHHHHHC
GEEDDGYMQDAELLESLALEKLNQAVEPLKEKGYAWVQVRTTFDYSDRAEFSQMRIVRRE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCC
PTSAEQARMDALEAELEAIEAGYDGSDEERGSTGELYKSIEKKKKAERIRDELTKLAESL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIYPDDLAIAGAIATVDHEGKLRIERGLIRKEDMRKQPKESKESKEPRESREQNEPGES
HHHCCCCHHHHHHHEEECCCCCEEHHHHCCCHHHHHCCCHHHHHHCCHHHHHHCCCCCCC
GEREAAAIEGAGGEKPVHSEKLTRMLTVHRTAAVQAAMTNRPEVALAALVHRMAVQIFSN
CCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
DSASNPVLQISIEETRVKPDAEGIEQSKAATALAKKRRQWQKRIDAAGRGGMTLFGWLLE
CCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QSQQDLLDLLAFCTAVSVNTVSERESTPPQDVTALMTALNLDMADWWEATGESYLSHVSK
HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DRLLAIVAQAVSPEHARSMNGLKKGDLVRQAEQVLSGIKWLPDHFKVTKTRTGKQSDA
HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCC
>Mature Secondary Structure
MMETIETGLVRIPIKKLVISPLNVRKKQGTGIEELAALIASQGLIHNLVVTVQQKKGRKS
CCCCHHCCCEEECHHHHHHCCHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHEEHHCCCCC
GKYEVIAGGRRLAALNLLVADRRLSKDHEVDCRVVEHKEALEISLSENSGREHMHPADLV
CCEEEEECCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEEEECCCCCCCCCCHHHHH
MAYRSLIDAGFALDEIAPRFGVSPLTVRRYLKLTKVSPRIFALYAEDRMSFEQITALALT
HHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEHHHCCHHHHHHHHCC
DDHELQERLWDNTPEYQRNGATFRRLITETEINIRTSPLARFVGVEEYEAAGGVIRRDLF
CCHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCEECCHHHHHHCCHHHHHHCCHHHHHHC
GEEDDGYMQDAELLESLALEKLNQAVEPLKEKGYAWVQVRTTFDYSDRAEFSQMRIVRRE
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHCC
PTSAEQARMDALEAELEAIEAGYDGSDEERGSTGELYKSIEKKKKAERIRDELTKLAESL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EEIYPDDLAIAGAIATVDHEGKLRIERGLIRKEDMRKQPKESKESKEPRESREQNEPGES
HHHCCCCHHHHHHHEEECCCCCEEHHHHCCCHHHHHCCCHHHHHHCCHHHHHHCCCCCCC
GEREAAAIEGAGGEKPVHSEKLTRMLTVHRTAAVQAAMTNRPEVALAALVHRMAVQIFSN
CCCHHHEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCC
DSASNPVLQISIEETRVKPDAEGIEQSKAATALAKKRRQWQKRIDAAGRGGMTLFGWLLE
CCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
QSQQDLLDLLAFCTAVSVNTVSERESTPPQDVTALMTALNLDMADWWEATGESYLSHVSK
HHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
DRLLAIVAQAVSPEHARSMNGLKKGDLVRQAEQVLSGIKWLPDHFKVTKTRTGKQSDA
HHHHHHHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9722640; 9628576 [H]