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The map label for this gene is ybcS [C]

Identifier: 82702574

GI number: 82702574

Start: 1656372

End: 1656926

Strand: Reverse

Name: ybcS [C]

Synonym: Nmul_A1445

Alternate gene names: 82702574

Gene position: 1656926-1656372 (Counterclockwise)

Preceding gene: 82702575

Following gene: 82702573

Centisome position: 52.04

GC content: 55.32

Gene sequence:

>555_bases
ATGAGTAAGCCATTGTTTAGCCAAGGCAGGTCCGCTGTAGCATTATTGGTGGTGGCTGCGTCAACACTGGTTGGAATCGC
GGTGAACGAGGGGTATAAGGATGAAGCATACATCCCTTTGCGCGGGGATGTCCCCACCATCGGGTTTGGTACGACCATGG
GCGTGAAAATGGGGGACAGGACAACCCCCGAGAGGTCTTTGATCCGGTTGCTGGATGAAATCGAGGGGGTTTATGCGGCT
GGAGTCAGACGCTGCGTGACTGTGCCTCTATATCAGCACGAGTATGAGGCGTATGTGAGCCTCGCTTATAACATCGGTGT
CGCTGCATTCTGCCGAAAAGCCTTACCTGGAAGACCCCCTAATCTTATCGACCTGCTCAATGCCGGACGGTATGCGGAAG
CGTGTGCGCGCATAGAGGCATTCAAATATGGCCCCGGTAAAAAAGTACTGCCGGGGCTCGTGAAGCGGCGTGCCAAGGAA
CGGGCATTATGCGAGGGACGAGTAACTGATCTGCAGCAGGATAGCTCTCCCGGAACCGGAGATCTGGCAGGGTGA

Upstream 100 bases:

>100_bases
GGAGACCATAAAGGCGAAACTGGATTGCATCACAGAAACCCTTCCCTGACGCCTGCATACCGATAAGCACAAATGAACAT
GGAACACGAGGAATCGAAAG

Downstream 100 bases:

>100_bases
GCGCATTCAGGATTTCCGGATTCTCCGGGCTTGTTCCGCGGCTGGCAAAGCACTTGCTCAGCTCGAACCAGGCGCAGACG
GCGACCAATTGCAACCTTGC

Product: glycoside hydrolase family protein

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Phage-Related Lysozyme; Glycoside Hydrolase; Glycoside Hydrolase Family Protein; Prophage LambdaSo Lysozyme; Phage Lysozyme; Glycoside Hydrolase Family; Lysozyme Protein; Glycosidase

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSKPLFSQGRSAVALLVVAASTLVGIAVNEGYKDEAYIPLRGDVPTIGFGTTMGVKMGDRTTPERSLIRLLDEIEGVYAA
GVRRCVTVPLYQHEYEAYVSLAYNIGVAAFCRKALPGRPPNLIDLLNAGRYAEACARIEAFKYGPGKKVLPGLVKRRAKE
RALCEGRVTDLQQDSSPGTGDLAG

Sequences:

>Translated_184_residues
MSKPLFSQGRSAVALLVVAASTLVGIAVNEGYKDEAYIPLRGDVPTIGFGTTMGVKMGDRTTPERSLIRLLDEIEGVYAA
GVRRCVTVPLYQHEYEAYVSLAYNIGVAAFCRKALPGRPPNLIDLLNAGRYAEACARIEAFKYGPGKKVLPGLVKRRAKE
RALCEGRVTDLQQDSSPGTGDLAG
>Mature_183_residues
SKPLFSQGRSAVALLVVAASTLVGIAVNEGYKDEAYIPLRGDVPTIGFGTTMGVKMGDRTTPERSLIRLLDEIEGVYAAG
VRRCVTVPLYQHEYEAYVSLAYNIGVAAFCRKALPGRPPNLIDLLNAGRYAEACARIEAFKYGPGKKVLPGLVKRRAKER
ALCEGRVTDLQQDSSPGTGDLAG

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 19775; Mature: 19644

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPLFSQGRSAVALLVVAASTLVGIAVNEGYKDEAYIPLRGDVPTIGFGTTMGVKMGDR
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCC
TTPERSLIRLLDEIEGVYAAGVRRCVTVPLYQHEYEAYVSLAYNIGVAAFCRKALPGRPP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NLIDLLNAGRYAEACARIEAFKYGPGKKVLPGLVKRRAKERALCEGRVTDLQQDSSPGTG
CHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
DLAG
CCCC
>Mature Secondary Structure 
SKPLFSQGRSAVALLVVAASTLVGIAVNEGYKDEAYIPLRGDVPTIGFGTTMGVKMGDR
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCEECCCC
TTPERSLIRLLDEIEGVYAAGVRRCVTVPLYQHEYEAYVSLAYNIGVAAFCRKALPGRPP
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
NLIDLLNAGRYAEACARIEAFKYGPGKKVLPGLVKRRAKERALCEGRVTDLQQDSSPGTG
CHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCC
DLAG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA