| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is yeaD [H]
Identifier: 82702523
GI number: 82702523
Start: 1589682
End: 1590608
Strand: Reverse
Name: yeaD [H]
Synonym: Nmul_A1394
Alternate gene names: 82702523
Gene position: 1590608-1589682 (Counterclockwise)
Preceding gene: 82702524
Following gene: 82702521
Centisome position: 49.95
GC content: 51.67
Gene sequence:
>927_bases ATGAACATAGAAGAGTTGAATAAAAACCATGGGATCGACGGGCAGGTCAAATTCATGGAGGGGGCAGGAGGGTTCCCCTT TATCAGGGTCGATAATGCCAAGGGTGGCGCAGTGATCTCTGTTTATGGAGGGCAGGTACTATCTTTTCAACCTGCAAATG AGCAGAACCTGATGTTCCTGAGCGAGGCTGCATATTATGAGGCAGGTAAAGGTATCAAGGGCGGCGCTCCCGTCTGCTGG CCTTGGTTCGGCCCGGATCCGCAACAGCAAGGGCGTCCTGTACATGGTTTTGTGCGTACCCGCCTCTGGAACGTCATTAA AACGGAAACCACTGGAAATGGCGACAGCAAGGTGACGCTCGGTTTGAGCGATACAGCGGAAACAAGGGCGATCTGGCCGC ATGCGTTCGATCTGGATCTCGAAGTTACAGTGGGAAACTCCCTGAATCTGGAATTGATCACGCGAAATAAAGATACCGCG CCTTTTTCAATCACGCAGGCTTTGCATACCTATTTCAAGGTCGGGCATATCGATCGCATCACCATTCTCGGTCTCGAGGG GGTCTCGTATCTCGATAAAGTCGACAACTACGCTCAAAAAACCCAGGCAGGTGCAATAACGATCAATTCCGAAGTCGATC GCATTTACCAAGATGTGCAGAAAGAGTTGGTGATCGACGATACCGCTTATGATCGCCGGATTCGCATTCAATCGAGCGAC AGCAGGACTGCTGTCGTATGGAATCCCTGGGCGAGAATTTCTGCCCAGATGGGCGACCTGAAGGATGACGACTACGAACA CTTTGTGTGCGTTGAAACCGCGAATGCTGGGTCAGAAGTGGTGGAAGTTGCTGCCGGCGGGGAATGCAGAGTAGCTGCGA ACTATCTGATAGAGCGAAATATTCCGGAGCTGAAACCGGCTGCTTGA
Upstream 100 bases:
>100_bases ATGCGGGTCGCCCGGCATAAACAGCTGTTGATGACAAAATGTTCAGGTGCCATTATGATCCTCTTCTATAGGGCATCTTC AGAAGCGAATAAGGAATGAA
Downstream 100 bases:
>100_bases TCGAACACCGCTCCGGTTACACGTCGAGGAAACCAGATTCCAACCCGTCAAACTGTTGAATTGATTTCCTCCCATAATTT CTGAAGCCGTTTGGCCGAAA
Product: aldose 1-epimerase
Products: NA
Alternate protein names: Putative D-hexose-6-phosphate mutarotase; Unknown protein from 2D-page spots T26/PR37 [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MNIEELNKNHGIDGQVKFMEGAGGFPFIRVDNAKGGAVISVYGGQVLSFQPANEQNLMFLSEAAYYEAGKGIKGGAPVCW PWFGPDPQQQGRPVHGFVRTRLWNVIKTETTGNGDSKVTLGLSDTAETRAIWPHAFDLDLEVTVGNSLNLELITRNKDTA PFSITQALHTYFKVGHIDRITILGLEGVSYLDKVDNYAQKTQAGAITINSEVDRIYQDVQKELVIDDTAYDRRIRIQSSD SRTAVVWNPWARISAQMGDLKDDDYEHFVCVETANAGSEVVEVAAGGECRVAANYLIERNIPELKPAA
Sequences:
>Translated_308_residues MNIEELNKNHGIDGQVKFMEGAGGFPFIRVDNAKGGAVISVYGGQVLSFQPANEQNLMFLSEAAYYEAGKGIKGGAPVCW PWFGPDPQQQGRPVHGFVRTRLWNVIKTETTGNGDSKVTLGLSDTAETRAIWPHAFDLDLEVTVGNSLNLELITRNKDTA PFSITQALHTYFKVGHIDRITILGLEGVSYLDKVDNYAQKTQAGAITINSEVDRIYQDVQKELVIDDTAYDRRIRIQSSD SRTAVVWNPWARISAQMGDLKDDDYEHFVCVETANAGSEVVEVAAGGECRVAANYLIERNIPELKPAA >Mature_308_residues MNIEELNKNHGIDGQVKFMEGAGGFPFIRVDNAKGGAVISVYGGQVLSFQPANEQNLMFLSEAAYYEAGKGIKGGAPVCW PWFGPDPQQQGRPVHGFVRTRLWNVIKTETTGNGDSKVTLGLSDTAETRAIWPHAFDLDLEVTVGNSLNLELITRNKDTA PFSITQALHTYFKVGHIDRITILGLEGVSYLDKVDNYAQKTQAGAITINSEVDRIYQDVQKELVIDDTAYDRRIRIQSSD SRTAVVWNPWARISAQMGDLKDDDYEHFVCVETANAGSEVVEVAAGGECRVAANYLIERNIPELKPAA
Specific function: Unknown
COG id: COG0676
COG function: function code G; Uncharacterized enzymes related to aldose 1-epimerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Glucose-6-phosphate 1-epimerase family [H]
Homologues:
Organism=Escherichia coli, GI87081973, Length=274, Percent_Identity=36.1313868613139, Blast_Score=174, Evalue=8e-45, Organism=Saccharomyces cerevisiae, GI6323746, Length=263, Percent_Identity=26.9961977186312, Blast_Score=91, Evalue=2e-19, Organism=Drosophila melanogaster, GI19921284, Length=249, Percent_Identity=31.3253012048193, Blast_Score=136, Evalue=2e-32, Organism=Drosophila melanogaster, GI28574481, Length=161, Percent_Identity=31.6770186335404, Blast_Score=94, Evalue=1e-19,
Paralogues:
None
Copy number: 560 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008183 - InterPro: IPR011013 - InterPro: IPR014718 [H]
Pfam domain/function: PF01263 Aldose_epim [H]
EC number: =5.1.3.15 [H]
Molecular weight: Translated: 33922; Mature: 33922
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIEELNKNHGIDGQVKFMEGAGGFPFIRVDNAKGGAVISVYGGQVLSFQPANEQNLMFL CCHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCEEEEECCCCCCCEEEE SEAAYYEAGKGIKGGAPVCWPWFGPDPQQQGRPVHGFVRTRLWNVIKTETTGNGDSKVTL ECCHHHHCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHEEECCCCCCCCEEEE GLSDTAETRAIWPHAFDLDLEVTVGNSLNLELITRNKDTAPFSITQALHTYFKVGHIDRI EECCCCCCEEECCEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE TILGLEGVSYLDKVDNYAQKTQAGAITINSEVDRIYQDVQKELVIDDTAYDRRIRIQSSD EEEEECCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHEEECCCCCCEEEEEECCC SRTAVVWNPWARISAQMGDLKDDDYEHFVCVETANAGSEVVEVAAGGECRVAANYLIERN CCEEEEECCHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEEECC IPELKPAA CCCCCCCC >Mature Secondary Structure MNIEELNKNHGIDGQVKFMEGAGGFPFIRVDNAKGGAVISVYGGQVLSFQPANEQNLMFL CCHHHCCCCCCCCCEEEEEECCCCCCEEEEECCCCCEEEEEECCEEEEECCCCCCCEEEE SEAAYYEAGKGIKGGAPVCWPWFGPDPQQQGRPVHGFVRTRLWNVIKTETTGNGDSKVTL ECCHHHHCCCCCCCCCCEEECCCCCCHHHCCCCHHHHHHHHHHHHEEECCCCCCCCEEEE GLSDTAETRAIWPHAFDLDLEVTVGNSLNLELITRNKDTAPFSITQALHTYFKVGHIDRI EECCCCCCEEECCEEEEEEEEEEECCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE TILGLEGVSYLDKVDNYAQKTQAGAITINSEVDRIYQDVQKELVIDDTAYDRRIRIQSSD EEEEECCCHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHEEECCCCCCEEEEEECCC SRTAVVWNPWARISAQMGDLKDDDYEHFVCVETANAGSEVVEVAAGGECRVAANYLIERN CCEEEEECCHHHHHHHCCCCCCCCCCEEEEEEECCCCCEEEEEECCCCEEEEEEEEEECC IPELKPAA CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9097040; 9278503; 9298646; 10493123 [H]