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The map label for this gene is fliD [H]

Identifier: 82702468

GI number: 82702468

Start: 1528393

End: 1530402

Strand: Direct

Name: fliD [H]

Synonym: Nmul_A1339

Alternate gene names: 82702468

Gene position: 1528393-1530402 (Clockwise)

Preceding gene: 82702467

Following gene: 82702469

Centisome position: 48.0

GC content: 56.07

Gene sequence:

>2010_bases
ATGGCGATTACCGCTGCCGGAGCAGGTTCGAACCTGGACGTAAATGGCATAGTTAGCCAGTTGATGGCGGCCGAACGTAC
GCCGCTTGCTTTGCTTCAGAAGCGCGAATCCGACTACCAGGCAAAACTATCCGCTTATGGAACACTGAAAGGTGCCTTGT
CTGCTTTCCAGACGGCAATGCAGGGACTGGCTGATCCTGCAAAATATAATGCAGTGAGCGCGAGTGCGGCAGATAGCTCT
CTGTTGACCGCAACCGGGAATAGCAATGGCAAGGCGGTGCCGGGTAGTTATTCGGTGGAAGTGCAGCAGCTTGCCCAGCA
GCAGAAAATCCGTTCCGAAGGATTTGCCAGCACATCAAGCACCGTAGGCAGCGGAACTTTGACGATACAGTACGGCACTT
ATGATAATGTGCTGAATACCTTTACTCTCAACAACGCGAAACCGGCGCAAACGATAACGATCGAACCCTCCAGCAACACG
CTCTCCGGTGTGCGTGACGCTATCAACGCAGCCAATGCCGGGGTGAGTGCAACGATTGTGAATGACGGCGCCGGCAACAA
ACTTGTGCTGACCGCAAAGGATCCAGGAGCGGCGAGCAGCCTGAAGATTACAGTCAGCGATGACGATGGGGGCAATCTCG
ACACAACCGGACTCTCCGCTCTTGCCTTCGACCCAACGGTCGGAGGGGGCTCCGGCAAGAATCTCATCCAGGTGCAGGCC
GCGCAGGATGCGAAACTCCGGATCGACGGGATCGATATCGTCAAGTCCTCGAATACGATTACAGACGCAATTGAAGGCGT
CACACTCAGCCTGCTCAAAACGAATGCAGGCAGTCCGACGACGCTGAATGTTTCACCGGACACCGCTGCTGCGAAGACAG
CGGTGGAAGCATTCGTAAAGTCATACAACAGCATCAATCAAACGCTTTCCAATCTCAGCGCCTATAACCCTGGAGCAAAG
AAGGGCGCGATATTGCAGGGGGATTCCGCGGCGTTCTCTATTCAGCGCGGAATTCGATCGGCATTAACAGCCATGATGGG
TGACAGTCGCGGCTTCACCTCCCTTTCCCAGATCGGTGTTACCTTGCAGAAAGACGGCAGCCTGGCGGTGGATTCCGCAA
AGCTGCAGGCGTCGATGGATACTGGATTTGAACAGATCGGCAGGCTGTTTACGATAGGCGGCACCTCCACCGATAGTCTG
ATTTCGTACGAAGGAGCCACGGATAAGACAGTGGCTGGAAATTATGCCGTTACGGTTACACAGCTCGCAACTCGAGGCAG
CCTCAGCGGAAGCCAGGCAGCAGGGCTAACGATAACGGCAGGAATCAACGATCAACTCAATTTTAATGTGGATGGGGTGG
CAGCCAGTATTACGCTGGCCGACGGAATTTATGCTTCCGCGGATGCATTGGCGGCCGAAGTGCAAAGCAAGCTGAATGGT
CTCTCTGGCCTGACAACCGAAGGAATTTCAGTATCGGTTTCCCCGTCCGCCGGCGTATTGAGCATCGTGTCGTCGCGTTA
CGGCTCCGCCTCCAGCGTTATCCTCACGGGAGGTAATGGTGCGGGCAATCTGCTCGGTGCCAGTCCTGTGGGAGCCACCG
GAATAGATGTCGCAGGCTCCATCAATGGTGTTTCCGCTACAGGGTCGGGACAGATGCTGACTGCTGCTGGCGGGGGATCC
GCCGAAGGTCTGCGCGTCGCCATCCACGGCGGCGCGCTCGGCACCCGGGGGACAATCGAGTTCTCGCGAGGTTACGCCGA
GCGATTGAGTAAGGTTGCAGAAGAGTTTCTCGCCACTGAGGGAGTGATTGCCACCCGGGTCGAGGGACTGAACGCCAGTA
TCAAGGATCTCGATCGGCGCCAGGAGGATTTTAGCCGTCGACTTGAAACCGTTGAGGCGCGTTACCGGGCACAGTTCTCT
GCGCTTGATGCCATGCTGGGCAGCTTGACCCAGACGAGCCAGTTTCTTCAACAACAACTGGCCTCGCTGCCAACTCTCAA
CGAAAAATAA

Upstream 100 bases:

>100_bases
AAAGACCATGAATCAGCTACAGGGTTTGTTGCTGCGCACCAAAGCCTGATGGTGCGATCGGGCAACCCACCGGAAACAGG
AAAAAGAAGAGGACAGAAAA

Downstream 100 bases:

>100_bases
CGGAGGAGTAAATATATGTATTCAGTACCTCGCTGCGGTGTAAACGCATATGCCCGGGTTGGTCTTGAAACGGGTGTAAT
CGCCGCCAGTCCTCATAAAC

Product: flagellar hook-associated 2-like

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 669; Mature: 668

Protein sequence:

>669_residues
MAITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAMQGLADPAKYNAVSASAADSS
LLTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFASTSSTVGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNT
LSGVRDAINAANAGVSATIVNDGAGNKLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQVQA
AQDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVEAFVKSYNSINQTLSNLSAYNPGAK
KGAILQGDSAAFSIQRGIRSALTAMMGDSRGFTSLSQIGVTLQKDGSLAVDSAKLQASMDTGFEQIGRLFTIGGTSTDSL
ISYEGATDKTVAGNYAVTVTQLATRGSLSGSQAAGLTITAGINDQLNFNVDGVAASITLADGIYASADALAAEVQSKLNG
LSGLTTEGISVSVSPSAGVLSIVSSRYGSASSVILTGGNGAGNLLGASPVGATGIDVAGSINGVSATGSGQMLTAAGGGS
AEGLRVAIHGGALGTRGTIEFSRGYAERLSKVAEEFLATEGVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFS
ALDAMLGSLTQTSQFLQQQLASLPTLNEK

Sequences:

>Translated_669_residues
MAITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAMQGLADPAKYNAVSASAADSS
LLTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFASTSSTVGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNT
LSGVRDAINAANAGVSATIVNDGAGNKLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQVQA
AQDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVEAFVKSYNSINQTLSNLSAYNPGAK
KGAILQGDSAAFSIQRGIRSALTAMMGDSRGFTSLSQIGVTLQKDGSLAVDSAKLQASMDTGFEQIGRLFTIGGTSTDSL
ISYEGATDKTVAGNYAVTVTQLATRGSLSGSQAAGLTITAGINDQLNFNVDGVAASITLADGIYASADALAAEVQSKLNG
LSGLTTEGISVSVSPSAGVLSIVSSRYGSASSVILTGGNGAGNLLGASPVGATGIDVAGSINGVSATGSGQMLTAAGGGS
AEGLRVAIHGGALGTRGTIEFSRGYAERLSKVAEEFLATEGVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFS
ALDAMLGSLTQTSQFLQQQLASLPTLNEK
>Mature_668_residues
AITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAMQGLADPAKYNAVSASAADSSL
LTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFASTSSTVGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNTL
SGVRDAINAANAGVSATIVNDGAGNKLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQVQAA
QDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVEAFVKSYNSINQTLSNLSAYNPGAKK
GAILQGDSAAFSIQRGIRSALTAMMGDSRGFTSLSQIGVTLQKDGSLAVDSAKLQASMDTGFEQIGRLFTIGGTSTDSLI
SYEGATDKTVAGNYAVTVTQLATRGSLSGSQAAGLTITAGINDQLNFNVDGVAASITLADGIYASADALAAEVQSKLNGL
SGLTTEGISVSVSPSAGVLSIVSSRYGSASSVILTGGNGAGNLLGASPVGATGIDVAGSINGVSATGSGQMLTAAGGGSA
EGLRVAIHGGALGTRGTIEFSRGYAERLSKVAEEFLATEGVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFSA
LDAMLGSLTQTSQFLQQQLASLPTLNEK

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

Organism=Escherichia coli, GI1788233, Length=403, Percent_Identity=34.9875930521092, Blast_Score=169, Evalue=5e-43,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 67729; Mature: 67598

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAM
CEEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QGLADPAKYNAVSASAADSSLLTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFASTSS
HHCCCCHHCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TVGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNTLSGVRDAINAANAGVSATIV
CCCCCEEEEEECCHHCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE
NDGAGNKLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQVQA
ECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
AQDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVEAFVK
CCCCEEEECCEEEEECCCCHHHHHCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHH
SYNSINQTLSNLSAYNPGAKKGAILQGDSAAFSIQRGIRSALTAMMGDSRGFTSLSQIGV
HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCE
TLQKDGSLAVDSAKLQASMDTGFEQIGRLFTIGGTSTDSLISYEGATDKTVAGNYAVTVT
EEECCCCEEEEHHHHHHHHHCCHHHHCCEEEECCCCCCCEEEECCCCCCEECCCEEEEEE
QLATRGSLSGSQAAGLTITAGINDQLNFNVDGVAASITLADGIYASADALAAEVQSKLNG
EHHHCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHCC
LSGLTTEGISVSVSPSAGVLSIVSSRYGSASSVILTGGNGAGNLLGASPVGATGIDVAGS
CCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
INGVSATGSGQMLTAAGGGSAEGLRVAIHGGALGTRGTIEFSRGYAERLSKVAEEFLATE
CCCEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCC
GVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFSALDAMLGSLTQTSQFLQQQL
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLPTLNEK
HHCCCCCCC
>Mature Secondary Structure 
AITAAGAGSNLDVNGIVSQLMAAERTPLALLQKRESDYQAKLSAYGTLKGALSAFQTAM
EEEECCCCCCCCHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
QGLADPAKYNAVSASAADSSLLTATGNSNGKAVPGSYSVEVQQLAQQQKIRSEGFASTSS
HHCCCCHHCCEEECCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
TVGSGTLTIQYGTYDNVLNTFTLNNAKPAQTITIEPSSNTLSGVRDAINAANAGVSATIV
CCCCCEEEEEECCHHCCHHEEEECCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEE
NDGAGNKLVLTAKDPGAASSLKITVSDDDGGNLDTTGLSALAFDPTVGGGSGKNLIQVQA
ECCCCCEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEE
AQDAKLRIDGIDIVKSSNTITDAIEGVTLSLLKTNAGSPTTLNVSPDTAAAKTAVEAFVK
CCCCEEEECCEEEEECCCCHHHHHCCEEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHH
SYNSINQTLSNLSAYNPGAKKGAILQGDSAAFSIQRGIRSALTAMMGDSRGFTSLSQIGV
HHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCE
TLQKDGSLAVDSAKLQASMDTGFEQIGRLFTIGGTSTDSLISYEGATDKTVAGNYAVTVT
EEECCCCEEEEHHHHHHHHHCCHHHHCCEEEECCCCCCCEEEECCCCCCEECCCEEEEEE
QLATRGSLSGSQAAGLTITAGINDQLNFNVDGVAASITLADGIYASADALAAEVQSKLNG
EHHHCCCCCCCCCCCEEEEECCCCCEEEEECCEEEEEEEECCCHHHHHHHHHHHHHHHCC
LSGLTTEGISVSVSPSAGVLSIVSSRYGSASSVILTGGNGAGNLLGASPVGATGIDVAGS
CCCCCCCCEEEEECCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
INGVSATGSGQMLTAAGGGSAEGLRVAIHGGALGTRGTIEFSRGYAERLSKVAEEFLATE
CCCEEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHHHHHHCC
GVIATRVEGLNASIKDLDRRQEDFSRRLETVEARYRAQFSALDAMLGSLTQTSQFLQQQL
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASLPTLNEK
HHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]