Click here to switch to the map view.

The map label for this gene is yuxH [H]

Identifier: 82702461

GI number: 82702461

Start: 1522239

End: 1523513

Strand: Direct

Name: yuxH [H]

Synonym: Nmul_A1332

Alternate gene names: 82702461

Gene position: 1522239-1523513 (Clockwise)

Preceding gene: 82702460

Following gene: 82702462

Centisome position: 47.81

GC content: 51.53

Gene sequence:

>1275_bases
ATGATTCTAGATACGGCTCCACATATTTCTTCGGTCGGGCAGGTAAAGGAATTCTTCCTGGCCCGTCAACCTATTCTGGA
TCAGAACCAGAATCTGATCGCTTACGAGTTATTGTTCCGCCGCGCAGGAGTCAGGGCACCGGTTAGCGCGGAGGATACCC
GGGGTGCCGCTTCCATCATCGCACATACATCCGAACTGGGCATCGAGAATGTGACCGGGAGCGCGCTCGGCTTCTTCAAC
GTGAATTCCACGCTGTTGATGGGAGACCTGGTTAATTTTCTACCCGCCGAAAAAGTTGTGTTCGAGTTTCCTCAAACGGA
CAAGATTACTCCCGAACTCGTCCGGCGTGTTGCCGAACTGGCGAAGGCAGGATATCGATTTGCGTTGGATGACGTTATCA
CCCTGTCCGAATACATAAAACCGTTACTGCCGTTTGTTGAAATCATCAAGATCGACACGTCCGTCATGACGTATGCCGAT
CTGGCCATGCTCGTTCGCCAGTTCAAACAGGCACGCAAGGTGCTTCTTGCTGACAAAGTAGAGACGCTCGAACAATTCCA
GAATTGCCATGAGCTCGGCTTTGACTATTACCAGGGTTACTACTTTGCAAAACCAGCTCTTCTGTCAGGCAAGAAGCTTG
CAACTTCGCAACTGGCGATCATGGAGCTGATGACTCTGGTAGCCAGGGACGCCGACACGATAGAAATCGAGCAACGCATC
AAAAAAGAAGTATCGCTTTGCCTGTCCTTATTACGATTGGTCAATACGCCCGCCATGGGTGTTACGAAAAGCATACATTC
GTTAAGTGAGGCCTTGATGGTCCTCGGCCGCCGCCAGTTGCAGCGATGGTTGCAAATTCAGATCTATGTCGGGCCGGACC
CTCAGATCCAATTCGGGTCGCCGCTTCTCCTGCTGGCAGCTACACGCGGCAAACTTCTTGAACTGGTTGCTCAAAAACTT
CAGCCCGCAAACAGAAGCATGGCCGATATTGCCTTTACCGTGGGCATTTTATCCTTGCTGGATGCTTTGTTCGGGCAACA
CATGGAAAGAATTCTCCGCCAGATCGTTCTGAGCGAGGAGATCACCGAAGCCTTGCTGTACCGGACGGGGTTTTACGGGG
ACTTGCTGAAGCTTGCCGAATATCTCGAAAAACCTGGCGAAGCCGGCCGACTGCTCGTGCCCCTGCTTGCCAGATTGGGG
CTCCCGATTGAAGAGCTTTATCCATTCCAATTGGAAGCATTTGAATGGAGCAACAGTTTGTTACCTACCTTATAG

Upstream 100 bases:

>100_bases
CTCCGAGTCATTCCCCAGGGAGGCGTGCTATCCGACCGTGGTTCTGACTGCGGTTAACTGTAACCGCTACCTGAGTTTTC
AGTCGAATAGAGACGGGCAG

Downstream 100 bases:

>100_bases
AAGACATACGTTCCTGGTTGGCATGTCATCCCGCATCCCTGATACATCCGGATATCGGAGTTATAAAGTTATCCGGCCAA
GGAGCAGGCACAAAAATTGA

Product: diguanylate phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 424; Mature: 424

Protein sequence:

>424_residues
MILDTAPHISSVGQVKEFFLARQPILDQNQNLIAYELLFRRAGVRAPVSAEDTRGAASIIAHTSELGIENVTGSALGFFN
VNSTLLMGDLVNFLPAEKVVFEFPQTDKITPELVRRVAELAKAGYRFALDDVITLSEYIKPLLPFVEIIKIDTSVMTYAD
LAMLVRQFKQARKVLLADKVETLEQFQNCHELGFDYYQGYYFAKPALLSGKKLATSQLAIMELMTLVARDADTIEIEQRI
KKEVSLCLSLLRLVNTPAMGVTKSIHSLSEALMVLGRRQLQRWLQIQIYVGPDPQIQFGSPLLLLAATRGKLLELVAQKL
QPANRSMADIAFTVGILSLLDALFGQHMERILRQIVLSEEITEALLYRTGFYGDLLKLAEYLEKPGEAGRLLVPLLARLG
LPIEELYPFQLEAFEWSNSLLPTL

Sequences:

>Translated_424_residues
MILDTAPHISSVGQVKEFFLARQPILDQNQNLIAYELLFRRAGVRAPVSAEDTRGAASIIAHTSELGIENVTGSALGFFN
VNSTLLMGDLVNFLPAEKVVFEFPQTDKITPELVRRVAELAKAGYRFALDDVITLSEYIKPLLPFVEIIKIDTSVMTYAD
LAMLVRQFKQARKVLLADKVETLEQFQNCHELGFDYYQGYYFAKPALLSGKKLATSQLAIMELMTLVARDADTIEIEQRI
KKEVSLCLSLLRLVNTPAMGVTKSIHSLSEALMVLGRRQLQRWLQIQIYVGPDPQIQFGSPLLLLAATRGKLLELVAQKL
QPANRSMADIAFTVGILSLLDALFGQHMERILRQIVLSEEITEALLYRTGFYGDLLKLAEYLEKPGEAGRLLVPLLARLG
LPIEELYPFQLEAFEWSNSLLPTL
>Mature_424_residues
MILDTAPHISSVGQVKEFFLARQPILDQNQNLIAYELLFRRAGVRAPVSAEDTRGAASIIAHTSELGIENVTGSALGFFN
VNSTLLMGDLVNFLPAEKVVFEFPQTDKITPELVRRVAELAKAGYRFALDDVITLSEYIKPLLPFVEIIKIDTSVMTYAD
LAMLVRQFKQARKVLLADKVETLEQFQNCHELGFDYYQGYYFAKPALLSGKKLATSQLAIMELMTLVARDADTIEIEQRI
KKEVSLCLSLLRLVNTPAMGVTKSIHSLSEALMVLGRRQLQRWLQIQIYVGPDPQIQFGSPLLLLAATRGKLLELVAQKL
QPANRSMADIAFTVGILSLLDALFGQHMERILRQIVLSEEITEALLYRTGFYGDLLKLAEYLEKPGEAGRLLVPLLARLG
LPIEELYPFQLEAFEWSNSLLPTL

Specific function: Unknown

COG id: COG3434

COG function: function code T; Predicted signal transduction protein containing EAL and modified HD-GYP domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014408
- InterPro:   IPR001633
- InterPro:   IPR013976 [H]

Pfam domain/function: PF00563 EAL; PF08668 HDOD [H]

EC number: NA

Molecular weight: Translated: 47469; Mature: 47469

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILDTAPHISSVGQVKEFFLARQPILDQNQNLIAYELLFRRAGVRAPVSAEDTRGAASII
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AHTSELGIENVTGSALGFFNVNSTLLMGDLVNFLPAEKVVFEFPQTDKITPELVRRVAEL
HHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHEECCCCCCCCHHHHHHHHHH
AKAGYRFALDDVITLSEYIKPLLPFVEIIKIDTSVMTYADLAMLVRQFKQARKVLLADKV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLEQFQNCHELGFDYYQGYYFAKPALLSGKKLATSQLAIMELMTLVARDADTIEIEQRI
HHHHHHHHHHHCCHHHHCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KKEVSLCLSLLRLVNTPAMGVTKSIHSLSEALMVLGRRQLQRWLQIQIYVGPDPQIQFGS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCC
PLLLLAATRGKLLELVAQKLQPANRSMADIAFTVGILSLLDALFGQHMERILRQIVLSEE
CEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITEALLYRTGFYGDLLKLAEYLEKPGEAGRLLVPLLARLGLPIEELYPFQLEAFEWSNSL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHCCCCC
LPTL
CCCC
>Mature Secondary Structure
MILDTAPHISSVGQVKEFFLARQPILDQNQNLIAYELLFRRAGVRAPVSAEDTRGAASII
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
AHTSELGIENVTGSALGFFNVNSTLLMGDLVNFLPAEKVVFEFPQTDKITPELVRRVAEL
HHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHEECCCCCCCCHHHHHHHHHH
AKAGYRFALDDVITLSEYIKPLLPFVEIIKIDTSVMTYADLAMLVRQFKQARKVLLADKV
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ETLEQFQNCHELGFDYYQGYYFAKPALLSGKKLATSQLAIMELMTLVARDADTIEIEQRI
HHHHHHHHHHHCCHHHHCCEEEECCHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
KKEVSLCLSLLRLVNTPAMGVTKSIHSLSEALMVLGRRQLQRWLQIQIYVGPDPQIQFGS
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCEECCC
PLLLLAATRGKLLELVAQKLQPANRSMADIAFTVGILSLLDALFGQHMERILRQIVLSEE
CEEEEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITEALLYRTGFYGDLLKLAEYLEKPGEAGRLLVPLLARLGLPIEELYPFQLEAFEWSNSL
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHCCCHHHHHHCCCCC
LPTL
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2507523; 9274030; 9384377; 1943994 [H]