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The map label for this gene is 82702398

Identifier: 82702398

GI number: 82702398

Start: 1460515

End: 1461231

Strand: Direct

Name: 82702398

Synonym: Nmul_A1269

Alternate gene names: NA

Gene position: 1460515-1461231 (Clockwise)

Preceding gene: 82702396

Following gene: 82702399

Centisome position: 45.87

GC content: 54.11

Gene sequence:

>717_bases
TTGAAACAAGAAGCGCGCATCTTACTACAAAAAACCCCCGATAATTCTTCCCCGGTTGAGTTTTCAGCAAGCTGCCGGCG
CTGTCCCCGATTGGCCGGGTTTCTGGATGAGGTGAAAGCCCGCCACATCGATTATTATGCCCGGCCAGTGCCTGCTTTTG
GCGATCCCAAGCCCCGGCTCCTGATCATCGGCCTGGCACCGGGAATGCATGGCGCGAACCGGACAGGCAGGCCTTTTACA
GGGGATTTTGCCGGCATTCTCTTGTATGGAACGCTCTTCAAGTTCGGTTTTGCCAGCCATGAAGGCTCTGCTTCCATCAA
TGACAATTTGGAGCTGATGCAATGCCGTATCACCAATGCGGTCAAATGCCTTCCGCCGGAGAACAAACCGGAGGCAAGCG
AGATCAGGCAGTGCAATAGCTATCTCGCACATGAGATTTCGGCCTTTGCAGAAGGGGGCGGTAGCGCGCTACTGGCTCTT
GGCGCTGTTGCTCATCAGGCTGTGTTGATGGCACTGGGCCTCAAGCCGAAGTCCCATGCCTTCCGTCATGGTGCCGTTCA
TGCGCTTGCCGGAAACTTCGGGTCTGATGACTTGAAACGCAACGGGTTGACGCTATATGACAGCTATCATTGCAGTCGTT
ACAATACTCAGACCCATCGCCTGACTACAGAAATGTTCGAAGAGGTGTTTGCAAAAATCCGCTCTGACCTGCTCTGA

Upstream 100 bases:

>100_bases
TAACATTTCAGTACGCGCCAGATTCGCTTGTCCCATTCAATCAGATTGCCGACGCGAATTTCGGTAGCAAGAACTTTAGC
CATATTTCTGGTGATTTCCT

Downstream 100 bases:

>100_bases
CCTGGTTTCATGGCGGACAGCGGAAAACTGGAGATTAACCATGCCCTATGTCAATATCCGTATTGCCGGCTCGCTCAGTC
GCGAGCAAAAGAAACAGATT

Product: uracil-DNA glycosylase superfamily protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MKQEARILLQKTPDNSSPVEFSASCRRCPRLAGFLDEVKARHIDYYARPVPAFGDPKPRLLIIGLAPGMHGANRTGRPFT
GDFAGILLYGTLFKFGFASHEGSASINDNLELMQCRITNAVKCLPPENKPEASEIRQCNSYLAHEISAFAEGGGSALLAL
GAVAHQAVLMALGLKPKSHAFRHGAVHALAGNFGSDDLKRNGLTLYDSYHCSRYNTQTHRLTTEMFEEVFAKIRSDLL

Sequences:

>Translated_238_residues
MKQEARILLQKTPDNSSPVEFSASCRRCPRLAGFLDEVKARHIDYYARPVPAFGDPKPRLLIIGLAPGMHGANRTGRPFT
GDFAGILLYGTLFKFGFASHEGSASINDNLELMQCRITNAVKCLPPENKPEASEIRQCNSYLAHEISAFAEGGGSALLAL
GAVAHQAVLMALGLKPKSHAFRHGAVHALAGNFGSDDLKRNGLTLYDSYHCSRYNTQTHRLTTEMFEEVFAKIRSDLL
>Mature_238_residues
MKQEARILLQKTPDNSSPVEFSASCRRCPRLAGFLDEVKARHIDYYARPVPAFGDPKPRLLIIGLAPGMHGANRTGRPFT
GDFAGILLYGTLFKFGFASHEGSASINDNLELMQCRITNAVKCLPPENKPEASEIRQCNSYLAHEISAFAEGGGSALLAL
GAVAHQAVLMALGLKPKSHAFRHGAVHALAGNFGSDDLKRNGLTLYDSYHCSRYNTQTHRLTTEMFEEVFAKIRSDLL

Specific function: Unknown

COG id: COG1573

COG function: function code L; Uracil-DNA glycosylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1259 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005122 [H]

Pfam domain/function: PF03167 UDG [H]

EC number: NA

Molecular weight: Translated: 26075; Mature: 26075

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQEARILLQKTPDNSSPVEFSASCRRCPRLAGFLDEVKARHIDYYARPVPAFGDPKPRL
CCCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
LIIGLAPGMHGANRTGRPFTGDFAGILLYGTLFKFGFASHEGSASINDNLELMQCRITNA
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHCCC
VKCLPPENKPEASEIRQCNSYLAHEISAFAEGGGSALLALGAVAHQAVLMALGLKPKSHA
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
FRHGAVHALAGNFGSDDLKRNGLTLYDSYHCSRYNTQTHRLTTEMFEEVFAKIRSDLL
HHHCCHHHHHCCCCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQEARILLQKTPDNSSPVEFSASCRRCPRLAGFLDEVKARHIDYYARPVPAFGDPKPRL
CCCCCEEEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
LIIGLAPGMHGANRTGRPFTGDFAGILLYGTLFKFGFASHEGSASINDNLELMQCRITNA
EEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHEEEHHCCC
VKCLPPENKPEASEIRQCNSYLAHEISAFAEGGGSALLALGAVAHQAVLMALGLKPKSHA
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHH
FRHGAVHALAGNFGSDDLKRNGLTLYDSYHCSRYNTQTHRLTTEMFEEVFAKIRSDLL
HHHCCHHHHHCCCCCCHHHHCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]