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The map label for this gene is tadA [H]

Identifier: 82702354

GI number: 82702354

Start: 1408787

End: 1409278

Strand: Direct

Name: tadA [H]

Synonym: Nmul_A1225

Alternate gene names: 82702354

Gene position: 1408787-1409278 (Clockwise)

Preceding gene: 82702342

Following gene: 82702355

Centisome position: 44.24

GC content: 54.67

Gene sequence:

>492_bases
TTGAATAGTTCGGATGCTGGCTTCATGCATGTTGCATTGGAGCTTTCTGCCCAGGCGGAACAAGCGGGCGAAGTGCCGGT
TGGAGCGATCGTAGTCAGGAATGGAACAATTGTTGGACGCGGTTATAATTGTCCCATCTCGACATCAGACCCCACTGCGC
ATGCAGAGGTGATGGCCTTACGGGATGCAGGCCGTCATCTCGGCAACTACCGGCTGGGAGACTGTACGCTCTACGTGACT
CTGGAACCTTGCGCCATGTGCATGGGAGCGATTTTTCATGCACGTATCGCCCGGCTGGTGTATGGGGCTGCAGATCCGAA
GACGGGCGCGTGTGGAAGCGTGATTAACCTCTCCGCCGAGCTTCGGCTCAACCATCACTTGCAGGTGACGAGAGGGGTGC
TCGCAGAGGAGGGGGGATATAAGCTGAAGCAATTCTTTGCAAAGCGACGCGAGGCAAGAACAACGAATAAGGAAGAAATT
GATGAGAATTGA

Upstream 100 bases:

>100_bases
GGGCATGCGGGTTTTGGAGCAGGGTGGCCAGTCCGAGGACGGAACATTTTTTCAGTAACAAGTAGCAATAACAAGTAATA
CAAAGGGAAGAATAATTGAT

Downstream 100 bases:

>100_bases
AGTCGGTATTCCTTCTCAAACACTTGATTTGCATGATAAGAATGCTGTGGTCAGGCGCTACCGTATCTCCTCGGCGAAAA
ACGGCGTGGGTCAGGAGAAC

Product: cytidine/deoxycytidylate deaminase zinc-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNSSDAGFMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMALRDAGRHLGNYRLGDCTLYVT
LEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAELRLNHHLQVTRGVLAEEGGYKLKQFFAKRREARTTNKEEI
DEN

Sequences:

>Translated_163_residues
MNSSDAGFMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMALRDAGRHLGNYRLGDCTLYVT
LEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAELRLNHHLQVTRGVLAEEGGYKLKQFFAKRREARTTNKEEI
DEN
>Mature_163_residues
MNSSDAGFMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMALRDAGRHLGNYRLGDCTLYVT
LEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAELRLNHHLQVTRGVLAEEGGYKLKQFFAKRREARTTNKEEI
DEN

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=150, Percent_Identity=35.3333333333333, Blast_Score=84, Evalue=5e-17,
Organism=Homo sapiens, GI19923945, Length=61, Percent_Identity=55.7377049180328, Blast_Score=67, Evalue=8e-12,
Organism=Escherichia coli, GI145693172, Length=151, Percent_Identity=49.6688741721854, Blast_Score=156, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17541138, Length=170, Percent_Identity=37.0588235294118, Blast_Score=111, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17554608, Length=97, Percent_Identity=41.2371134020619, Blast_Score=93, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17555996, Length=79, Percent_Identity=44.3037974683544, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6325319, Length=153, Percent_Identity=34.640522875817, Blast_Score=69, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6322425, Length=172, Percent_Identity=27.3255813953488, Blast_Score=61, Evalue=8e-11,
Organism=Drosophila melanogaster, GI21355527, Length=148, Percent_Identity=33.7837837837838, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17574; Mature: 17574

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSSDAGFMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMAL
CCCCCCCEEEEEEEECCCHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHH
RDAGRHLGNYRLGDCTLYVTLEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAE
HHHHHHHCCEEECCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
LRLNHHLQVTRGVLAEEGGYKLKQFFAKRREARTTNKEEIDEN
EEECCCEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCC
>Mature Secondary Structure
MNSSDAGFMHVALELSAQAEQAGEVPVGAIVVRNGTIVGRGYNCPISTSDPTAHAEVMAL
CCCCCCCEEEEEEEECCCHHHCCCCCEEEEEEECCEEEECCCCCCCCCCCCCCHHHHHHH
RDAGRHLGNYRLGDCTLYVTLEPCAMCMGAIFHARIARLVYGAADPKTGACGSVINLSAE
HHHHHHHCCEEECCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
LRLNHHLQVTRGVLAEEGGYKLKQFFAKRREARTTNKEEIDEN
EEECCCEEEHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]