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The map label for this gene is ccmC [H]

Identifier: 82702341

GI number: 82702341

Start: 1397026

End: 1397766

Strand: Reverse

Name: ccmC [H]

Synonym: Nmul_A1212

Alternate gene names: 82702341

Gene position: 1397766-1397026 (Counterclockwise)

Preceding gene: 82702343

Following gene: 82702340

Centisome position: 43.9

GC content: 53.85

Gene sequence:

>741_bases
ATGGCGATAAACTGGTTTAAATATTCCTCTCCGGCAAGCTTCTATTTTCTCGCCGGCAAAATGATTCCCCTGTTTTCCAT
TGCTGCAATTGTATTGTGCGCAGTGGGACTTTATATCGGCTTTTTTGTAGCTCCCACCGATTTTCAGCAGGGCGAAGCCT
ATCGTATCATTTTCATCCATGTGCCCGCGGCCTGGCTGTCGATGTTTCTCTACGTCATCATGGCGCTATGGTCGGGTATC
GGCCTTGCATTCAATACCCGCCTTTCCGCCATGGTGGCAACCGCCATTGCCCCCACTGGCGCAATGTTCACGTTTATTGC
GCTTTGGACCGGGGCCCTGTGGGGCAAGCCCATGTGGGGCACCTGGTGGGTGTGGGATGCGCGCCTTACCTCCGAACTGA
TTCTTCTGTTCCTCTACATCGGCTTCATGTCTTTGCAGGCGGCCATAGACGATCCGCGCCGTGCGGACAAAGCCGGAGCA
GTGATTGCTCTGGTAGGCGTGGTAAACGTCCCCATCATCTATTTTTCTGTGAAGTGGTGGAATACATTGCATCAAGGCGC
CTCCGTCAGTCTCACGCAGTCGCCTAAAATGGCCACCACCATGCTTACGGGGATGCTGATCATGTCAATCGCATGCTGGA
TGTATGCCATCGCGGTGATATTGATACGCACGCGCGCCATTATCCTGGAACGTGAACGTCATACCGCGTGGGTAGGTCAG
TTGCAGGAGGCAGCGCAATGA

Upstream 100 bases:

>100_bases
GACCACATGGGATATTATGGCCATATGATCATATGCACGGCGCAATCTATCAAAGCCTCATCGGGGCCTCAATTATGAAG
TCTGCTACCTACTTTGCTAC

Downstream 100 bases:

>100_bases
ACTGGAACAGTGTGTCTGAATTTCTGGATATGGGCGGGTACGGGTTCTACGTATGGGGGTCCTACCTCGTTACCTTGATC
TGCATTGCAGGGGAAATCGT

Product: heme exporter protein CcmC

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmC [H]

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAINWFKYSSPASFYFLAGKMIPLFSIAAIVLCAVGLYIGFFVAPTDFQQGEAYRIIFIHVPAAWLSMFLYVIMALWSGI
GLAFNTRLSAMVATAIAPTGAMFTFIALWTGALWGKPMWGTWWVWDARLTSELILLFLYIGFMSLQAAIDDPRRADKAGA
VIALVGVVNVPIIYFSVKWWNTLHQGASVSLTQSPKMATTMLTGMLIMSIACWMYAIAVILIRTRAIILERERHTAWVGQ
LQEAAQ

Sequences:

>Translated_246_residues
MAINWFKYSSPASFYFLAGKMIPLFSIAAIVLCAVGLYIGFFVAPTDFQQGEAYRIIFIHVPAAWLSMFLYVIMALWSGI
GLAFNTRLSAMVATAIAPTGAMFTFIALWTGALWGKPMWGTWWVWDARLTSELILLFLYIGFMSLQAAIDDPRRADKAGA
VIALVGVVNVPIIYFSVKWWNTLHQGASVSLTQSPKMATTMLTGMLIMSIACWMYAIAVILIRTRAIILERERHTAWVGQ
LQEAAQ
>Mature_245_residues
AINWFKYSSPASFYFLAGKMIPLFSIAAIVLCAVGLYIGFFVAPTDFQQGEAYRIIFIHVPAAWLSMFLYVIMALWSGIG
LAFNTRLSAMVATAIAPTGAMFTFIALWTGALWGKPMWGTWWVWDARLTSELILLFLYIGFMSLQAAIDDPRRADKAGAV
IALVGVVNVPIIYFSVKWWNTLHQGASVSLTQSPKMATTMLTGMLIMSIACWMYAIAVILIRTRAIILERERHTAWVGQL
QEAAQ

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG0755

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmC/CycZ/HelC family [H]

Homologues:

Organism=Escherichia coli, GI1788527, Length=236, Percent_Identity=49.1525423728814, Blast_Score=214, Evalue=4e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002541
- InterPro:   IPR003557 [H]

Pfam domain/function: PF01578 Cytochrom_C_asm [H]

EC number: NA

Molecular weight: Translated: 27407; Mature: 27276

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAINWFKYSSPASFYFLAGKMIPLFSIAAIVLCAVGLYIGFFVAPTDFQQGEAYRIIFIH
CEEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
VPAAWLSMFLYVIMALWSGIGLAFNTRLSAMVATAIAPTGAMFTFIALWTGALWGKPMWG
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
TWWVWDARLTSELILLFLYIGFMSLQAAIDDPRRADKAGAVIALVGVVNVPIIYFSVKWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCEEEEEEHHH
NTLHQGASVSLTQSPKMATTMLTGMLIMSIACWMYAIAVILIRTRAIILERERHTAWVGQ
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LQEAAQ
HHHHCC
>Mature Secondary Structure 
AINWFKYSSPASFYFLAGKMIPLFSIAAIVLCAVGLYIGFFVAPTDFQQGEAYRIIFIH
EEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEE
VPAAWLSMFLYVIMALWSGIGLAFNTRLSAMVATAIAPTGAMFTFIALWTGALWGKPMWG
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
TWWVWDARLTSELILLFLYIGFMSLQAAIDDPRRADKAGAVIALVGVVNVPIIYFSVKWW
EEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHCCEEEEEEHHH
NTLHQGASVSLTQSPKMATTMLTGMLIMSIACWMYAIAVILIRTRAIILERERHTAWVGQ
HHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
LQEAAQ
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]