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The map label for this gene is secB

Identifier: 82702253

GI number: 82702253

Start: 1294937

End: 1295416

Strand: Direct

Name: secB

Synonym: Nmul_A1124

Alternate gene names: 82702253

Gene position: 1294937-1295416 (Clockwise)

Preceding gene: 82702252

Following gene: 82702254

Centisome position: 40.67

GC content: 50.21

Gene sequence:

>480_bases
ATGAGCGATGAGCAGCAGCAACCGGTTTTCAGCATCGAAAAGGTCTATGTCAAAGACCTTTCTGTTGAAATACCAAACGC
GCCCAGAATATACCTGGAGCGCGAGACACCTGAAGTGAACATCCAACTGCACAGCAAGAGCGAGCGCATCGATGAAACCT
TGTATGAGGTCGTGCTGACAACGACCGTCACCGCAAAAATCAAGGACAAGACGATGTTTCTGGTGGAGATACAGCAAGGA
GGTGTTTTTCAGATTCGTCATGTTCCGGAAGCTGAAATGGAGCTTGTGCTCGGTATTGCATGCCCAAATATTCTCTTCCC
CTATCTGCGCGAGGCAGTTTCGGATACTGTAACGCGCGCGGGATTTCATCCGGTCATTTTGAATCCGGTGAATTTCGAGG
CACTTTACTACCAGAGAAAGCAGCAGACGGAGAATTCGGCGGCGCCGCAGACTCCGGAGACACAGCAAATCACGCATTAG

Upstream 100 bases:

>100_bases
CAGATGGGAATACCTTTTGTGAACAATTTTATTTCCGGGGATGATGATTTCGGATTAATGTTCACCTGGTTCATAGTTTT
ATCATTCTTTGGAACCCGAC

Downstream 100 bases:

>100_bases
AATAAAGATGAGGCGTGTGCGCGGTTCATCGCTGAAAATATCCTCCTTGCTGAGCCGGGGACTGGCCATCCTCGGAATGA
CGGTGTCGATGTTTCCATCG

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MSDEQQQPVFSIEKVYVKDLSVEIPNAPRIYLERETPEVNIQLHSKSERIDETLYEVVLTTTVTAKIKDKTMFLVEIQQG
GVFQIRHVPEAEMELVLGIACPNILFPYLREAVSDTVTRAGFHPVILNPVNFEALYYQRKQQTENSAAPQTPETQQITH

Sequences:

>Translated_159_residues
MSDEQQQPVFSIEKVYVKDLSVEIPNAPRIYLERETPEVNIQLHSKSERIDETLYEVVLTTTVTAKIKDKTMFLVEIQQG
GVFQIRHVPEAEMELVLGIACPNILFPYLREAVSDTVTRAGFHPVILNPVNFEALYYQRKQQTENSAAPQTPETQQITH
>Mature_158_residues
SDEQQQPVFSIEKVYVKDLSVEIPNAPRIYLERETPEVNIQLHSKSERIDETLYEVVLTTTVTAKIKDKTMFLVEIQQGG
VFQIRHVPEAEMELVLGIACPNILFPYLREAVSDTVTRAGFHPVILNPVNFEALYYQRKQQTENSAAPQTPETQQITH

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family

Homologues:

Organism=Escherichia coli, GI1790038, Length=133, Percent_Identity=45.1127819548872, Blast_Score=132, Evalue=9e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SECB_NITMU (Q2Y9Z4)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_411819.1
- ProteinModelPortal:   Q2Y9Z4
- SMR:   Q2Y9Z4
- STRING:   Q2Y9Z4
- GeneID:   3785704
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A1124
- eggNOG:   COG1952
- HOGENOM:   HBG294212
- OMA:   GFPPLMI
- PhylomeDB:   Q2Y9Z4
- ProtClustDB:   PRK05751
- BioCyc:   NMUL323848:NMUL_A1124-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00821
- InterPro:   IPR003708
- Gene3D:   G3DSA:3.10.420.10
- PRINTS:   PR01594
- TIGRFAMs:   TIGR00809

Pfam domain/function: PF02556 SecB; SSF54611 SecB

EC number: NA

Molecular weight: Translated: 18199; Mature: 18068

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEQQQPVFSIEKVYVKDLSVEIPNAPRIYLERETPEVNIQLHSKSERIDETLYEVVLT
CCCCCCCCHHHHHHEEEEECEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHH
TTVTAKIKDKTMFLVEIQQGGVFQIRHVPEAEMELVLGIACPNILFPYLREAVSDTVTRA
HHEEEEECCCEEEEEEECCCCEEEEEECCCHHHEEEEEHHCHHHHHHHHHHHHHHHHHHC
GFHPVILNPVNFEALYYQRKQQTENSAAPQTPETQQITH
CCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDEQQQPVFSIEKVYVKDLSVEIPNAPRIYLERETPEVNIQLHSKSERIDETLYEVVLT
CCCCCCCHHHHHHEEEEECEEECCCCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHH
TTVTAKIKDKTMFLVEIQQGGVFQIRHVPEAEMELVLGIACPNILFPYLREAVSDTVTRA
HHEEEEECCCEEEEEEECCCCEEEEEECCCHHHEEEEEHHCHHHHHHHHHHHHHHHHHHC
GFHPVILNPVNFEALYYQRKQQTENSAAPQTPETQQITH
CCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA