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The map label for this gene is nuoJ [H]

Identifier: 82702229

GI number: 82702229

Start: 1266752

End: 1267357

Strand: Direct

Name: nuoJ [H]

Synonym: Nmul_A1100

Alternate gene names: 82702229

Gene position: 1266752-1267357 (Clockwise)

Preceding gene: 82702228

Following gene: 82702230

Centisome position: 39.78

GC content: 55.61

Gene sequence:

>606_bases
ATGAGTTTTACAGATATAATCTTCTACTTTTTTTCCGCGGTATTAGTGGCATCGGCCCTCGGAGTCATCACCGCGCGCAA
TCCGGTGCATTCGGCGTTGCTGCTGGTGCTGGCCTTTTTTGCCTCCGCCGGATTATGGCTGCTGCTGGAAGCGGAATTTC
TTGCCATTACCCTGGTGTTGGTCTACGTGGGAGCAGTGATGGTACTGTTCCTGTTCGTCGTGATGATGCTCGACATCAAT
CTTGCCCGGCTTCGGGAAGGCTTCTGGAAGTGGTTTCCGTTCGGATTATTGCTCGGCCTGGTGATGTCGATTGAGATGGC
CATGGTTCTGACGGGCAAACAGTTCGGTGCCAACGAGCTTCCCGCTCCGGCGGCGCGGGCGGCCGACTACAGCAATACCA
AGGAACTGGGGCGCCTGATCTATACCGAATACGTTTATGCCTTTGAGCTCGCGGCGGTGATCCTGCTGGTTGCGATCGTG
GCTGCAATCGCGCTCACCTTGCGTCAGCGGGGCGAGAGCAAATCCATGGATGTCGCCAAACAGGTAGCGGTGAAGCGTGA
AGACCGCATCCGCATCGTGTCGATGGCATCCGAGAAGAAAGAATAA

Upstream 100 bases:

>100_bases
CGTCACGCTTATCCGCAGAAACAAGCGGAAGGCATTTTCATGAGTTCATCTTTATCTTACGTGAACCCTTCCAGACCCCC
AGATTTCTAGAAGTAGCCAT

Downstream 100 bases:

>100_bases
AAGTAATATATTGCGGCGTTTTTACGCCGCCATGAAAGGGGGTGTAGTGGTTTCGTTATCCCATTATCTTGTTATCGGTG
CGATTCTGTTTGCCATCAGC

Product: NADH-ubiquinone/plastoquinone oxidoreductase, chain 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSFTDIIFYFFSAVLVASALGVITARNPVHSALLLVLAFFASAGLWLLLEAEFLAITLVLVYVGAVMVLFLFVVMMLDIN
LARLREGFWKWFPFGLLLGLVMSIEMAMVLTGKQFGANELPAPAARAADYSNTKELGRLIYTEYVYAFELAAVILLVAIV
AAIALTLRQRGESKSMDVAKQVAVKREDRIRIVSMASEKKE

Sequences:

>Translated_201_residues
MSFTDIIFYFFSAVLVASALGVITARNPVHSALLLVLAFFASAGLWLLLEAEFLAITLVLVYVGAVMVLFLFVVMMLDIN
LARLREGFWKWFPFGLLLGLVMSIEMAMVLTGKQFGANELPAPAARAADYSNTKELGRLIYTEYVYAFELAAVILLVAIV
AAIALTLRQRGESKSMDVAKQVAVKREDRIRIVSMASEKKE
>Mature_200_residues
SFTDIIFYFFSAVLVASALGVITARNPVHSALLLVLAFFASAGLWLLLEAEFLAITLVLVYVGAVMVLFLFVVMMLDINL
ARLREGFWKWFPFGLLLGLVMSIEMAMVLTGKQFGANELPAPAARAADYSNTKELGRLIYTEYVYAFELAAVILLVAIVA
AIALTLRQRGESKSMDVAKQVAVKREDRIRIVSMASEKKE

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=189, Percent_Identity=31.2169312169312, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 22220; Mature: 22089

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTDIIFYFFSAVLVASALGVITARNPVHSALLLVLAFFASAGLWLLLEAEFLAITLVL
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VYVGAVMVLFLFVVMMLDINLARLREGFWKWFPFGLLLGLVMSIEMAMVLTGKQFGANEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAPAARAADYSNTKELGRLIYTEYVYAFELAAVILLVAIVAAIALTLRQRGESKSMDVAK
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QVAVKREDRIRIVSMASEKKE
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFTDIIFYFFSAVLVASALGVITARNPVHSALLLVLAFFASAGLWLLLEAEFLAITLVL
CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
VYVGAVMVLFLFVVMMLDINLARLREGFWKWFPFGLLLGLVMSIEMAMVLTGKQFGANEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PAPAARAADYSNTKELGRLIYTEYVYAFELAAVILLVAIVAAIALTLRQRGESKSMDVAK
CCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
QVAVKREDRIRIVSMASEKKE
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]