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The map label for this gene is 82702180

Identifier: 82702180

GI number: 82702180

Start: 1212770

End: 1213279

Strand: Direct

Name: 82702180

Synonym: Nmul_A1051

Alternate gene names: NA

Gene position: 1212770-1213279 (Clockwise)

Preceding gene: 82702173

Following gene: 82702181

Centisome position: 38.09

GC content: 46.86

Gene sequence:

>510_bases
TTGTTTGCCATACGCGATGAACATCTTGCCCTGGATATTGTTCAGGATTCGATGATGAAGCTTGTCGAGAAGTATTCGGC
CAAACCGCTGGAAGAATTACCTCTCCTGTTTCAACGCATCCTGCAAAATACCATCCGGGATTTTTATCGTCGACAGAAAA
CGCGTTCACTGTGGACGACGCTGTTTTCAGCATTCATTCCTTCCGATCATGAAAAGGAAAGCGAAGATTTCGATCTGCTG
GAAACTTTGCAATCCGACCCGTCATCATCTAAGGTTAATGACCCCCACCAACAACTCGAACAGTCGCAACTTATCAATCT
GCTCGAGAGGGCTATTGAAACCCTGCCAGCACGTCAACGCGAGGCTTTTCTACTGCGTTACTGGGAGGAAATGGATGTTA
TGGAAACTGCAAAAATCATGGGGTGCTCCGAGGGGAGTGTGAAAACGCACTGTTCCCGTGCAACTCATACACTTGCCGCA
ATGTTGAAAAAACATGGAATTGGGCTATGA

Upstream 100 bases:

>100_bases
TCCTGTTCTTTCATCTTCCAAGAGGCGAATCGTCCTGGCTACAAAACAGGAATTTTCGAATTTTCTGGCTGAAATCGAAC
GGCGCGCCTACAAGCAAGCT

Downstream 100 bases:

>100_bases
GTGAAACTGATGTAGGGAGGGGAGTAGCGCGGTTGCTGGATCGCGGACTCGATGACCTCAAGCAGGGTACATTGAATCGT
CTTCAGTCTGCGCGCAGGGC

Product: RNA polymerase factor sigma-70

Products: NA

Alternate protein names: RNA Polymerase Sigma-24 Subunit ECF Subfamily; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma-; RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Transcription Regulator Protein; RNA Polymerase Sigma-E Factor; RNA Polymerase Sigma-70 Factor; Specialized Sigma Subunits Of RNA Polymerase; ECF Subfamily RNA Polymerase Sigma Factor

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MFAIRDEHLALDIVQDSMMKLVEKYSAKPLEELPLLFQRILQNTIRDFYRRQKTRSLWTTLFSAFIPSDHEKESEDFDLL
ETLQSDPSSSKVNDPHQQLEQSQLINLLERAIETLPARQREAFLLRYWEEMDVMETAKIMGCSEGSVKTHCSRATHTLAA
MLKKHGIGL

Sequences:

>Translated_169_residues
MFAIRDEHLALDIVQDSMMKLVEKYSAKPLEELPLLFQRILQNTIRDFYRRQKTRSLWTTLFSAFIPSDHEKESEDFDLL
ETLQSDPSSSKVNDPHQQLEQSQLINLLERAIETLPARQREAFLLRYWEEMDVMETAKIMGCSEGSVKTHCSRATHTLAA
MLKKHGIGL
>Mature_169_residues
MFAIRDEHLALDIVQDSMMKLVEKYSAKPLEELPLLFQRILQNTIRDFYRRQKTRSLWTTLFSAFIPSDHEKESEDFDLL
ETLQSDPSSSKVNDPHQQLEQSQLINLLERAIETLPARQREAFLLRYWEEMDVMETAKIMGCSEGSVKTHCSRATHTLAA
MLKKHGIGL

Specific function: Unknown

COG id: COG1595

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19638; Mature: 19638

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFAIRDEHLALDIVQDSMMKLVEKYSAKPLEELPLLFQRILQNTIRDFYRRQKTRSLWTT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSAFIPSDHEKESEDFDLLETLQSDPSSSKVNDPHQQLEQSQLINLLERAIETLPARQR
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
EAFLLRYWEEMDVMETAKIMGCSEGSVKTHCSRATHTLAAMLKKHGIGL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFAIRDEHLALDIVQDSMMKLVEKYSAKPLEELPLLFQRILQNTIRDFYRRQKTRSLWTT
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFSAFIPSDHEKESEDFDLLETLQSDPSSSKVNDPHQQLEQSQLINLLERAIETLPARQR
HHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHH
EAFLLRYWEEMDVMETAKIMGCSEGSVKTHCSRATHTLAAMLKKHGIGL
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA