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The map label for this gene is ybbK [C]

Identifier: 82702167

GI number: 82702167

Start: 1199826

End: 1200659

Strand: Reverse

Name: ybbK [C]

Synonym: Nmul_A1038

Alternate gene names: 82702167

Gene position: 1200659-1199826 (Counterclockwise)

Preceding gene: 82702168

Following gene: 82702165

Centisome position: 37.71

GC content: 55.04

Gene sequence:

>834_bases
ATGCTCGCCAATTCGGTATTCGGCACGCTCGCCCTCATTCTTATCCTCGCGCTATTCTCGATATTCCGCATTTTGCGCGA
ATATGAACGGGGTGTCGTGTTCCTGCTCGGCCGCTTCTACAAGGTGAAAGGCCCCGGCCTGATCATCATCATTCCAGGGA
TTCAGAAAATGGTGAAAGTTGACCTGCGCACGGTGGTGATGGACGTACCGAGCCAAGACGTCATTTCACGCGACAACGTC
TCGGTGAAAGTCAGTGCCGTGGTGTATTTTCGCGTGGTCGATCCGCAAAAATCCATCATCCAGGTGGAGAACTTTCTTGC
CGCCACCAGCCAGTTCGCGCAAACCACGTTGCGATCGGTACTGGGCAAGCACGAACTCGATGAAATGCTGGCGGAACGCG
AGAAACTCAACATGGATATCCAGAAAGTGCTGGACATTCAGACCGACGCCTGGGGCATCAAGGTATCCAATGTCGAGATC
AAGCATGTGGACATTGACGAATCCATGATACGGGCTATTGCCCGGCAGGCGGAAGCGGAACGCGAACGTCGCGCCAAGGT
GATTCACGCCGAGGGTGAATTACAGGCATCGGAGCAACTCATGCAGGCGGCAGAAACGCTGTCGCGGCAGGCCGGCGCCA
TGCAACTGCGCTATCTCCAGACGCTTACGACAATTGCGGGCGACAAATCCAATACGGTTATTTTTCCAGTACCGATGGAT
CTGGTATCGACTCTGACAGAGTCGACCGGGAACCGGAGGGCGAAAGCTTCCGATACCGCAGGACCAGAAGATGCCCCCTC
GCTTCCGCTACCTAATTCCGCTGAATCCACGTAA

Upstream 100 bases:

>100_bases
TCCGCCCAACCGCTGGTTCGGGGCCAGAAGGTGCGTGTGACCGGAATCGACGGCCTCATCCTGCATGTAACCGCAGCAGA
AAAATAACCAGGAGACACTT

Downstream 100 bases:

>100_bases
TCACCGCTAATGCCGACACCCATGCGAACCCCCTCCCCTCGAGACCGGTCCTTTCCTGCTCGAGGCGAGACTTTTGCATA
CTCCCCATGGATCGGGTAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLANSVFGTLALILILALFSIFRILREYERGVVFLLGRFYKVKGPGLIIIIPGIQKMVKVDLRTVVMDVPSQDVISRDNV
SVKVSAVVYFRVVDPQKSIIQVENFLAATSQFAQTTLRSVLGKHELDEMLAEREKLNMDIQKVLDIQTDAWGIKVSNVEI
KHVDIDESMIRAIARQAEAERERRAKVIHAEGELQASEQLMQAAETLSRQAGAMQLRYLQTLTTIAGDKSNTVIFPVPMD
LVSTLTESTGNRRAKASDTAGPEDAPSLPLPNSAEST

Sequences:

>Translated_277_residues
MLANSVFGTLALILILALFSIFRILREYERGVVFLLGRFYKVKGPGLIIIIPGIQKMVKVDLRTVVMDVPSQDVISRDNV
SVKVSAVVYFRVVDPQKSIIQVENFLAATSQFAQTTLRSVLGKHELDEMLAEREKLNMDIQKVLDIQTDAWGIKVSNVEI
KHVDIDESMIRAIARQAEAERERRAKVIHAEGELQASEQLMQAAETLSRQAGAMQLRYLQTLTTIAGDKSNTVIFPVPMD
LVSTLTESTGNRRAKASDTAGPEDAPSLPLPNSAEST
>Mature_277_residues
MLANSVFGTLALILILALFSIFRILREYERGVVFLLGRFYKVKGPGLIIIIPGIQKMVKVDLRTVVMDVPSQDVISRDNV
SVKVSAVVYFRVVDPQKSIIQVENFLAATSQFAQTTLRSVLGKHELDEMLAEREKLNMDIQKVLDIQTDAWGIKVSNVEI
KHVDIDESMIRAIARQAEAERERRAKVIHAEGELQASEQLMQAAETLSRQAGAMQLRYLQTLTTIAGDKSNTVIFPVPMD
LVSTLTESTGNRRAKASDTAGPEDAPSLPLPNSAEST

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI221316744, Length=266, Percent_Identity=42.4812030075188, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI21686995, Length=266, Percent_Identity=42.4812030075188, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI38016911, Length=229, Percent_Identity=45.4148471615721, Blast_Score=197, Evalue=7e-51,
Organism=Homo sapiens, GI7657615, Length=272, Percent_Identity=34.5588235294118, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI7305503, Length=315, Percent_Identity=30.7936507936508, Blast_Score=132, Evalue=3e-31,
Organism=Homo sapiens, GI20149563, Length=166, Percent_Identity=35.5421686746988, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI38016907, Length=57, Percent_Identity=52.6315789473684, Blast_Score=69, Evalue=5e-12,
Organism=Escherichia coli, GI1786697, Length=162, Percent_Identity=37.6543209876543, Blast_Score=124, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17569493, Length=237, Percent_Identity=47.6793248945148, Blast_Score=220, Evalue=5e-58,
Organism=Caenorhabditis elegans, GI193209764, Length=237, Percent_Identity=47.6793248945148, Blast_Score=219, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI25153583, Length=277, Percent_Identity=43.6823104693141, Blast_Score=198, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17569499, Length=239, Percent_Identity=45.6066945606695, Blast_Score=197, Evalue=5e-51,
Organism=Caenorhabditis elegans, GI71987612, Length=257, Percent_Identity=45.136186770428, Blast_Score=195, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI71987621, Length=257, Percent_Identity=45.136186770428, Blast_Score=194, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI17569497, Length=240, Percent_Identity=39.5833333333333, Blast_Score=194, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17570459, Length=242, Percent_Identity=42.5619834710744, Blast_Score=192, Evalue=1e-49,
Organism=Caenorhabditis elegans, GI71989948, Length=227, Percent_Identity=46.2555066079295, Blast_Score=190, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI17570161, Length=249, Percent_Identity=43.3734939759036, Blast_Score=184, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI193210507, Length=249, Percent_Identity=43.3734939759036, Blast_Score=184, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI32566490, Length=227, Percent_Identity=44.4933920704846, Blast_Score=172, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=47.2826086956522, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI71989963, Length=122, Percent_Identity=47.5409836065574, Blast_Score=117, Evalue=9e-27,
Organism=Caenorhabditis elegans, GI32564147, Length=177, Percent_Identity=35.5932203389831, Blast_Score=114, Evalue=7e-26,
Organism=Caenorhabditis elegans, GI17542664, Length=159, Percent_Identity=27.0440251572327, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45556022, Length=238, Percent_Identity=47.4789915966387, Blast_Score=214, Evalue=5e-56,
Organism=Drosophila melanogaster, GI18860517, Length=242, Percent_Identity=45.4545454545455, Blast_Score=205, Evalue=3e-53,
Organism=Drosophila melanogaster, GI24657857, Length=243, Percent_Identity=47.7366255144033, Blast_Score=204, Evalue=5e-53,
Organism=Drosophila melanogaster, GI281365664, Length=243, Percent_Identity=47.7366255144033, Blast_Score=203, Evalue=1e-52,
Organism=Drosophila melanogaster, GI62484448, Length=243, Percent_Identity=47.7366255144033, Blast_Score=202, Evalue=2e-52,
Organism=Drosophila melanogaster, GI62484274, Length=243, Percent_Identity=47.7366255144033, Blast_Score=202, Evalue=2e-52,
Organism=Drosophila melanogaster, GI21356845, Length=246, Percent_Identity=37.8048780487805, Blast_Score=189, Evalue=2e-48,
Organism=Drosophila melanogaster, GI28573263, Length=238, Percent_Identity=39.0756302521008, Blast_Score=184, Evalue=4e-47,
Organism=Drosophila melanogaster, GI281361631, Length=235, Percent_Identity=39.1489361702128, Blast_Score=177, Evalue=7e-45,
Organism=Drosophila melanogaster, GI281361633, Length=235, Percent_Identity=39.1489361702128, Blast_Score=177, Evalue=7e-45,
Organism=Drosophila melanogaster, GI281361635, Length=181, Percent_Identity=39.2265193370166, Blast_Score=141, Evalue=4e-34,
Organism=Drosophila melanogaster, GI45550506, Length=165, Percent_Identity=38.7878787878788, Blast_Score=124, Evalue=5e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 30649; Mature: 30649

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLANSVFGTLALILILALFSIFRILREYERGVVFLLGRFYKVKGPGLIIIIPGIQKMVKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHEEECCCCEEEEECCHHHHHHH
DLRTVVMDVPSQDVISRDNVSVKVSAVVYFRVVDPQKSIIQVENFLAATSQFAQTTLRSV
HHHHHHHCCCCHHHHCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LGKHELDEMLAEREKLNMDIQKVLDIQTDAWGIKVSNVEIKHVDIDESMIRAIARQAEAE
HCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECEEEEEECCCHHHHHHHHHHHHHH
RERRAKVIHAEGELQASEQLMQAAETLSRQAGAMQLRYLQTLTTIAGDKSNTVIFPVPMD
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHH
LVSTLTESTGNRRAKASDTAGPEDAPSLPLPNSAEST
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLANSVFGTLALILILALFSIFRILREYERGVVFLLGRFYKVKGPGLIIIIPGIQKMVKV
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHEEECCCCEEEEECCHHHHHHH
DLRTVVMDVPSQDVISRDNVSVKVSAVVYFRVVDPQKSIIQVENFLAATSQFAQTTLRSV
HHHHHHHCCCCHHHHCCCCCEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
LGKHELDEMLAEREKLNMDIQKVLDIQTDAWGIKVSNVEIKHVDIDESMIRAIARQAEAE
HCHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEEECEEEEEECCCHHHHHHHHHHHHHH
RERRAKVIHAEGELQASEQLMQAAETLSRQAGAMQLRYLQTLTTIAGDKSNTVIFPVPMD
HHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHH
LVSTLTESTGNRRAKASDTAGPEDAPSLPLPNSAEST
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]