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The map label for this gene is vacJ [C]

Identifier: 82702164

GI number: 82702164

Start: 1196312

End: 1197184

Strand: Reverse

Name: vacJ [C]

Synonym: Nmul_A1035

Alternate gene names: 82702164

Gene position: 1197184-1196312 (Counterclockwise)

Preceding gene: 82702165

Following gene: 82702158

Centisome position: 37.6

GC content: 52.81

Gene sequence:

>873_bases
ATGGCACGCTCTGTCAAACCTTCTCCTCTATTATTGCCGTTACTTCTTGGGTCTCTCCTCAACGGTGGGGCCATGGCTGA
GGACACCACGGCTGATGGAAGCGCTCCCGCAGAGAAGAACGCTTCGACCGCCAAAACCGCTTCTGTTGATGATAACAGGC
CAACAGAAGCGATTGAGGGACCTGTATTCAAAAATGCGGCTCCACCTGCCACTTACCCGACCTACAGTAAAAAAGACCCG
TGGGAACCCGTCAACCGCAAGATATTTTCATTCAATGAATCGGTTGATGATTACGTCATGAGGCCGGTTGCAAGGGGATA
CAGATGGATAATGCCGGACCCCCTTGAAACGGCAGTAGGAAATGTTTTCGCCAATCTCGGTGATATACCGATCACGCTGA
ATAATCTTTTGCAGCTCAAATTCAGCAATGCGCTCACCAGCAGCACCCGGTTCGTGGTGAACAGCACGCTTGGTCTCGCC
GGCATCGTGGATCTGGCAAGCGGTATTGGTCTGGAAAAGCATAATGAGGATTTCGGGCAGACTCTGGGTCATTATGGCGT
CGCAAGCGGACCGTATGTCGTTTTGCCCTTCCTCGGACCCAGCTCCACCCGGGATGCGGGGGGACGCGTCATTGACACCG
TGACCGACCCTGTATTTGTGGGCAGCTTTTTCGTCGCACCCTTTATAGGTCCGATAGTGGGCTCCACCAAGGTTACGGAC
GCTCGCGCCGATCTGCTCAAATCCGAAAAAACCCTGGAAGAAGCTTCCCTAGACAAATACGAGTTTATCCGGGATGCCTA
TCTCCAGAGACGGCAAAATCTGGTGTATGACGGGAATCCCCCGAAGGATACGGAGGATGAAGAGGAAATTTGA

Upstream 100 bases:

>100_bases
AGCCTCAGGATTGAGCGAGAAAAAAAGTGTTTTCTTGCTTGAAATTAGCCATATAATGGCGAAAAAACATTCCCTGTCAA
CTTCAGGATTTACCTTGACT

Downstream 100 bases:

>100_bases
ACCGCGCGAAGGAACAAGAAAGTAAAAGCCTGTCGAACCTGACCCGTCAGAACTGACGGGGCGCAAAAAAGGGCGGAAGC
ATGTTATGCTTCCGCCCTTT

Product: VacJ-like lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MARSVKPSPLLLPLLLGSLLNGGAMAEDTTADGSAPAEKNASTAKTASVDDNRPTEAIEGPVFKNAAPPATYPTYSKKDP
WEPVNRKIFSFNESVDDYVMRPVARGYRWIMPDPLETAVGNVFANLGDIPITLNNLLQLKFSNALTSSTRFVVNSTLGLA
GIVDLASGIGLEKHNEDFGQTLGHYGVASGPYVVLPFLGPSSTRDAGGRVIDTVTDPVFVGSFFVAPFIGPIVGSTKVTD
ARADLLKSEKTLEEASLDKYEFIRDAYLQRRQNLVYDGNPPKDTEDEEEI

Sequences:

>Translated_290_residues
MARSVKPSPLLLPLLLGSLLNGGAMAEDTTADGSAPAEKNASTAKTASVDDNRPTEAIEGPVFKNAAPPATYPTYSKKDP
WEPVNRKIFSFNESVDDYVMRPVARGYRWIMPDPLETAVGNVFANLGDIPITLNNLLQLKFSNALTSSTRFVVNSTLGLA
GIVDLASGIGLEKHNEDFGQTLGHYGVASGPYVVLPFLGPSSTRDAGGRVIDTVTDPVFVGSFFVAPFIGPIVGSTKVTD
ARADLLKSEKTLEEASLDKYEFIRDAYLQRRQNLVYDGNPPKDTEDEEEI
>Mature_289_residues
ARSVKPSPLLLPLLLGSLLNGGAMAEDTTADGSAPAEKNASTAKTASVDDNRPTEAIEGPVFKNAAPPATYPTYSKKDPW
EPVNRKIFSFNESVDDYVMRPVARGYRWIMPDPLETAVGNVFANLGDIPITLNNLLQLKFSNALTSSTRFVVNSTLGLAG
IVDLASGIGLEKHNEDFGQTLGHYGVASGPYVVLPFLGPSSTRDAGGRVIDTVTDPVFVGSFFVAPFIGPIVGSTKVTDA
RADLLKSEKTLEEASLDKYEFIRDAYLQRRQNLVYDGNPPKDTEDEEEI

Specific function: Unknown

COG id: COG2853

COG function: function code M; Surface lipoprotein

Gene ontology:

Cell location: Attached To The Outer Membrane By A Lipid Anchor [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mlaA family [H]

Homologues:

Organism=Escherichia coli, GI1788688, Length=221, Percent_Identity=33.9366515837104, Blast_Score=114, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007428 [H]

Pfam domain/function: PF04333 VacJ [H]

EC number: NA

Molecular weight: Translated: 31283; Mature: 31152

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSVKPSPLLLPLLLGSLLNGGAMAEDTTADGSAPAEKNASTAKTASVDDNRPTEAIEG
CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCC
PVFKNAAPPATYPTYSKKDPWEPVNRKIFSFNESVDDYVMRPVARGYRWIMPDPLETAVG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCHHHHHHH
NVFANLGDIPITLNNLLQLKFSNALTSSTRFVVNSTLGLAGIVDLASGIGLEKHNEDFGQ
HHHHHCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHH
TLGHYGVASGPYVVLPFLGPSSTRDAGGRVIDTVTDPVFVGSFFVAPFIGPIVGSTKVTD
HHHHCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHH
ARADLLKSEKTLEEASLDKYEFIRDAYLQRRQNLVYDGNPPKDTEDEEEI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC
>Mature Secondary Structure 
ARSVKPSPLLLPLLLGSLLNGGAMAEDTTADGSAPAEKNASTAKTASVDDNRPTEAIEG
CCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCC
PVFKNAAPPATYPTYSKKDPWEPVNRKIFSFNESVDDYVMRPVARGYRWIMPDPLETAVG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEECCCCHHHHHHH
NVFANLGDIPITLNNLLQLKFSNALTSSTRFVVNSTLGLAGIVDLASGIGLEKHNEDFGQ
HHHHHCCCCCEEHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCCCCCHHHHH
TLGHYGVASGPYVVLPFLGPSSTRDAGGRVIDTVTDPVFVGSFFVAPFIGPIVGSTKVTD
HHHHCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHH
ARADLLKSEKTLEEASLDKYEFIRDAYLQRRQNLVYDGNPPKDTEDEEEI
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA