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The map label for this gene is petB [H]

Identifier: 82702133

GI number: 82702133

Start: 1164644

End: 1165888

Strand: Reverse

Name: petB [H]

Synonym: Nmul_A1004

Alternate gene names: 82702133

Gene position: 1165888-1164644 (Counterclockwise)

Preceding gene: 82702134

Following gene: 82702132

Centisome position: 36.61

GC content: 53.65

Gene sequence:

>1245_bases
ATGAGCAAGCGATTGGAGGCAATGATCGGCTGGATCGACGCCCGATTTCCATTGACAGCCAACTGGAGAGCGCATCTCAG
CGAGTACTACGCGCCCAAGAACTTCAATTTCTGGTACTACTTCGGTTCACTTGCCATGCTCGTGCTGGTGAACCAGCTTC
TCACCGGCATTTTCCTCACGATGAACTACAAGCCGGATGCCAGCATGGCATTCGCCTCGGTGGAATATATCATGCGTGAC
GTGAATTACGGCTGGATTATCCGTTACATGCATTCCACCGGCGCCTCGATGTTCTTCGTGGTCGTCTACCTGCACATGTT
CCGCGGGATGATGTATGGCTCCTATCGCAAACCGCGCGAGCTTCTCTGGGTCATCGGCATGGGCATCTTTTTCGTCCTCA
TGATGTTGGCATTCACCGGCTATATCCTCCCCTGGGGGCAGATGTCATACTGGGGCGCGCAGGTGATCATCAGCATGATC
GGCGCGATCCCGGTGATCGGCCAGACGCTGTCGAACTGGATTCTGGGCGACTTCATGCTCTCGGATGCGGCGCTCAACCG
CTTCTTTGCCTATCACGTGGTGACCCTGCCCGGCCTGCTGGTAGTGCTGGTGATCGTCCATATTCTGGCGCTGCATGAAG
TAGGTTCGAACAATCCGGACGGGATCGAGATCAAGGCCAACAAGGACCCCGTGACGCATATCCCCGTGGATGGCATTCCC
TTCCACCCCTATTATTCGGTAAAGGATATTTTCGGCGTCGTCGTGTTCCTGATCGTGTTTACCGGCATCATATTCTTCAT
GCCGGAAATGGGCGGATACTTCCTCGAGTACAATAATTTCATTCCTGCCAACACGCTGCAGACTCCCGACCACATCGCCC
CAGTATGGTATTTCACGCCATACTATTCGATGCTGAGGGCGGTGACAGTGAACTTTCTCTGGATAGATGCCAAGCTCTGG
GGCATCGTGCTGATGGGCGGCTCCGTCGCAATCTTTGCCTTGCTGCCATGGCTGGATCGCAGTCCGGTAAAATCCATCCG
GTACAAGGGGCCCATTTTCAAGTTTGCCCTTACACTTTTTGTCATCAGCGTCCTTGTGCTTGGCTGGCTGGGCACAAAAT
CGCCCACACCCCTCTACACGTTGCTCGCGCAGATATTCACGGTAATCTATTTTGCTTTTTTCATTCTCATGCCGTGGTAC
AGCAAGATCGATAAAACCAAGCCTGAACCGACCAGGGTGAGATAA

Upstream 100 bases:

>100_bases
TACAGGGCAGTTCCGGCACCCACTAACCTGGTTGTCCCACCCCACATGTATTTGAGCGATACGCGCCTGCTGGTCGGGTC
TGATAAGGAGTCTGCATAAA

Downstream 100 bases:

>100_bases
TGAGAAACCTTAAAAGCATCGTATTTGTTTTTTGTCTGGCTCCGCTTGTCGCATTCGCAAGCGAGTCGGCAGTACCGCTT
GATACGGCGCCCATCAAGCC

Product: cytochrome b/b6-like

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 414; Mature: 413

Protein sequence:

>414_residues
MSKRLEAMIGWIDARFPLTANWRAHLSEYYAPKNFNFWYYFGSLAMLVLVNQLLTGIFLTMNYKPDASMAFASVEYIMRD
VNYGWIIRYMHSTGASMFFVVVYLHMFRGMMYGSYRKPRELLWVIGMGIFFVLMMLAFTGYILPWGQMSYWGAQVIISMI
GAIPVIGQTLSNWILGDFMLSDAALNRFFAYHVVTLPGLLVVLVIVHILALHEVGSNNPDGIEIKANKDPVTHIPVDGIP
FHPYYSVKDIFGVVVFLIVFTGIIFFMPEMGGYFLEYNNFIPANTLQTPDHIAPVWYFTPYYSMLRAVTVNFLWIDAKLW
GIVLMGGSVAIFALLPWLDRSPVKSIRYKGPIFKFALTLFVISVLVLGWLGTKSPTPLYTLLAQIFTVIYFAFFILMPWY
SKIDKTKPEPTRVR

Sequences:

>Translated_414_residues
MSKRLEAMIGWIDARFPLTANWRAHLSEYYAPKNFNFWYYFGSLAMLVLVNQLLTGIFLTMNYKPDASMAFASVEYIMRD
VNYGWIIRYMHSTGASMFFVVVYLHMFRGMMYGSYRKPRELLWVIGMGIFFVLMMLAFTGYILPWGQMSYWGAQVIISMI
GAIPVIGQTLSNWILGDFMLSDAALNRFFAYHVVTLPGLLVVLVIVHILALHEVGSNNPDGIEIKANKDPVTHIPVDGIP
FHPYYSVKDIFGVVVFLIVFTGIIFFMPEMGGYFLEYNNFIPANTLQTPDHIAPVWYFTPYYSMLRAVTVNFLWIDAKLW
GIVLMGGSVAIFALLPWLDRSPVKSIRYKGPIFKFALTLFVISVLVLGWLGTKSPTPLYTLLAQIFTVIYFAFFILMPWY
SKIDKTKPEPTRVR
>Mature_413_residues
SKRLEAMIGWIDARFPLTANWRAHLSEYYAPKNFNFWYYFGSLAMLVLVNQLLTGIFLTMNYKPDASMAFASVEYIMRDV
NYGWIIRYMHSTGASMFFVVVYLHMFRGMMYGSYRKPRELLWVIGMGIFFVLMMLAFTGYILPWGQMSYWGAQVIISMIG
AIPVIGQTLSNWILGDFMLSDAALNRFFAYHVVTLPGLLVVLVIVHILALHEVGSNNPDGIEIKANKDPVTHIPVDGIPF
HPYYSVKDIFGVVVFLIVFTGIIFFMPEMGGYFLEYNNFIPANTLQTPDHIAPVWYFTPYYSMLRAVTVNFLWIDAKLWG
IVLMGGSVAIFALLPWLDRSPVKSIRYKGPIFKFALTLFVISVLVLGWLGTKSPTPLYTLLAQIFTVIYFAFFILMPWYS
KIDKTKPEPTRVR

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG1290

COG function: function code C; Cytochrome b subunit of the bc complex

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b family [H]

Homologues:

Organism=Homo sapiens, GI251831119, Length=376, Percent_Identity=41.2234042553192, Blast_Score=259, Evalue=2e-69,
Organism=Saccharomyces cerevisiae, GI6226529, Length=375, Percent_Identity=40.2666666666667, Blast_Score=251, Evalue=1e-67,
Organism=Saccharomyces cerevisiae, GI6226532, Length=242, Percent_Identity=42.5619834710744, Blast_Score=192, Evalue=6e-50,
Organism=Saccharomyces cerevisiae, GI6226531, Length=152, Percent_Identity=48.0263157894737, Blast_Score=145, Evalue=2e-35,
Organism=Saccharomyces cerevisiae, GI6226530, Length=128, Percent_Identity=50, Blast_Score=123, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016175
- InterPro:   IPR005798
- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00032 Cytochrom_B_C; PF00033 Cytochrom_B_N [H]

EC number: 1.10.2.2

Molecular weight: Translated: 47517; Mature: 47386

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS51002 CYTB_NTER ; PS51003 CYTB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SKRLEAMIGWIDARFPLTANWRAHLSEYYAPKNFNFWYYFGSLAMLVLVNQLLTGIFLT
CHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHEEE
MNYKPDASMAFASVEYIMRDVNYGWIIRYMHSTGASMFFVVVYLHMFRGMMYGSYRKPRE
ECCCCCCHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHHHHHHHHHHHHCCCCCHHH
LLWVIGMGIFFVLMMLAFTGYILPWGQMSYWGAQVIISMIGAIPVIGQTLSNWILGDFML
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDAALNRFFAYHVVTLPGLLVVLVIVHILALHEVGSNNPDGIEIKANKDPVTHIPVDGIP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCC
FHPYYSVKDIFGVVVFLIVFTGIIFFMPEMGGYFLEYNNFIPANTLQTPDHIAPVWYFTP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEHHH
YYSMLRAVTVNFLWIDAKLWGIVLMGGSVAIFALLPWLDRSPVKSIRYKGPIFKFALTLF
HHHHHHHHHHHHEEEEHHEEEHEEECCHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHH
VISVLVLGWLGTKSPTPLYTLLAQIFTVIYFAFFILMPWYSKIDKTKPEPTRVR
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA