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The map label for this gene is petC [H]

Identifier: 82702132

GI number: 82702132

Start: 1163907

End: 1164644

Strand: Reverse

Name: petC [H]

Synonym: Nmul_A1003

Alternate gene names: 82702132

Gene position: 1164644-1163907 (Counterclockwise)

Preceding gene: 82702133

Following gene: 82702131

Centisome position: 36.58

GC content: 52.3

Gene sequence:

>738_bases
ATGAGAAACCTTAAAAGCATCGTATTTGTTTTTTGTCTGGCTCCGCTTGTCGCATTCGCAAGCGAGTCGGCAGTACCGCT
TGATACGGCGCCCATCAAGCCGAGGGACATGACTTCCCTGCAGCGGGGTGCGAAGACCTTTGTCAATTATTGCCTGTCCT
GTCACAGCGCGGAATTCATGCGCTATAACCGGCTGCGCGATCTCGGCCTTACCGAGTCACAGATCAGTGAAAACCTCATA
TTCACAGGTCAGAAAGTCGGCGAACTCATGACGGTGGCAATGCCAAAGAAGGAAGCAAAGCAATGGTTCGGAGTAACTCC
GCCTGATCTCTCCGTCATTGCCCGTTCGCGCGGTCCTGACTGGCTTTATACCTATCTGCGGAAATTTTATCGGGATGACA
GCACTGCAACCGGCTGGAATAACCTTGTGTTCGACAAGGCCGCCATGCCTCACGTGCTGTACGAATTGCAGGGAGAGCAA
GTCCTCAATGTAAAGTCAGAGGATGACGGCCACGGCGGTAAGCACGAAATAAAGGAATTGACCCTCGCGAAACCGGGGTC
GCTTTCCAAGACGGAATACGACGCATACGTTGCCGATCTGGTGAATTTCCTGGTTTACCTGGGTGAACCCGCAGCCAACA
AGCGCGTGCAGATCGGAATTGTCGTGATGCTCTTCCTGTTCCTCATGCTTGTGCTGACCTATGCCCTCAAGAAGGAATAC
TGGAAGGATGTTCATTGA

Upstream 100 bases:

>100_bases
TCGCGCAGATATTCACGGTAATCTATTTTGCTTTTTTCATTCTCATGCCGTGGTACAGCAAGATCGATAAAACCAAGCCT
GAACCGACCAGGGTGAGATA

Downstream 100 bases:

>100_bases
GATTGATCATTATCCAGAAAGCAGTCGACTTGATATTGCTGGGAATTAACCGGTCATGATGACTTTGTACTCAGCCACAA
CCTGCCCGTACAGCCATCGT

Product: cytochrome c1

Products: Q; ferrocytochrome c

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MRNLKSIVFVFCLAPLVAFASESAVPLDTAPIKPRDMTSLQRGAKTFVNYCLSCHSAEFMRYNRLRDLGLTESQISENLI
FTGQKVGELMTVAMPKKEAKQWFGVTPPDLSVIARSRGPDWLYTYLRKFYRDDSTATGWNNLVFDKAAMPHVLYELQGEQ
VLNVKSEDDGHGGKHEIKELTLAKPGSLSKTEYDAYVADLVNFLVYLGEPAANKRVQIGIVVMLFLFLMLVLTYALKKEY
WKDVH

Sequences:

>Translated_245_residues
MRNLKSIVFVFCLAPLVAFASESAVPLDTAPIKPRDMTSLQRGAKTFVNYCLSCHSAEFMRYNRLRDLGLTESQISENLI
FTGQKVGELMTVAMPKKEAKQWFGVTPPDLSVIARSRGPDWLYTYLRKFYRDDSTATGWNNLVFDKAAMPHVLYELQGEQ
VLNVKSEDDGHGGKHEIKELTLAKPGSLSKTEYDAYVADLVNFLVYLGEPAANKRVQIGIVVMLFLFLMLVLTYALKKEY
WKDVH
>Mature_245_residues
MRNLKSIVFVFCLAPLVAFASESAVPLDTAPIKPRDMTSLQRGAKTFVNYCLSCHSAEFMRYNRLRDLGLTESQISENLI
FTGQKVGELMTVAMPKKEAKQWFGVTPPDLSVIARSRGPDWLYTYLRKFYRDDSTATGWNNLVFDKAAMPHVLYELQGEQ
VLNVKSEDDGHGGKHEIKELTLAKPGSLSKTEYDAYVADLVNFLVYLGEPAANKRVQIGIVVMLFLFLMLVLTYALKKEY
WKDVH

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. c1 functions as an electron donor to cytochrome c [H]

COG id: COG2857

COG function: function code C; Cytochrome c1

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002326
- InterPro:   IPR021157
- InterPro:   IPR009056 [H]

Pfam domain/function: PF02167 Cytochrom_C1 [H]

EC number: 1.10.2.2

Molecular weight: Translated: 27755; Mature: 27755

Theoretical pI: Translated: 8.42; Mature: 8.42

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HCCCC
>Mature Secondary Structure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HCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: QH2; ferricytochrome c

Specific reaction: QH2 + 2 ferricytochrome c = Q + 2 ferrocytochrome c

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA