| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is dgoT [C]
Identifier: 82702095
GI number: 82702095
Start: 1122503
End: 1123741
Strand: Reverse
Name: dgoT [C]
Synonym: Nmul_A0966
Alternate gene names: 82702095
Gene position: 1123741-1122503 (Counterclockwise)
Preceding gene: 82702096
Following gene: 82702094
Centisome position: 35.29
GC content: 57.79
Gene sequence:
>1239_bases TTGGCTAAATCACTATTTGCAGGCATCTGGTTCAGGATTGTCCTGGTATTTGCCATGGCCCTGCCGATGCTTGTCTTGTA TGCCATCAGCACGCTTGGACCATTCCTCGTGCGCGATCTGCGCTTCGAGCCCGGACTGCCGGGTTATCTCGTGATGAGTG CATTCGGCATCGCGGCCATTCTATCGCTCTGGTCAGGCGCGTTCGTCGACCGGATCGGGACACGCCGAGCGCTGGCAGTG CTCTTCTTCGCCGTAGCGCTTGCTTTTGCGCTGATTGCAACGGTTGAAGATTATTACTCCCTGGTTGCAGCGGCTGCCAT TTGCGGAATCGCCCAGGCGCTGGCAAACCCGGTCACCAATTTACTGATCGCGCAGCATGTTTCACCGGAGAAAAAGGCGA CAGTCGTAGGATTCAAGCAATCCGGCGTTCAGCTTGCGGCGCTTTTTGCAGGTCTCATTCTTCCCGCCATCGCAACGCAA TACGGGTGGCATGCCGCATTCGGCATCGTTGTTCCGGTAGCGATACTGTTCGGAATTACGACACCCTTCATCGCTCCGCG GAAACCCTCGGAAACGCGTAAAGCTTTCACTGTCCCCCTGCCAAATGTACTGCTGCTGCGTTTGATGGCCATCCAGTTTT GCGTGGGTATAGCACTCTCCGCCTTCGTTACGTTCCTGCCGACCTTTGCCGTCCGCCAAGGGATGGCGCTGTCGGTGGCG GGAAGCTTGATCGCCGTCTTCGGCGTGATGGGGATACTCTCGCGGATAACATTGACACCCCTCGGTGCCAGAATGAAAGA CGAATCGCTGCTTCTGATTGTGCTCATCGCCATTGCAGCTTGCGCAATCGCGGTGACGATGAGGGCCAATGCGGACAGTC ATTGGCCCCTCTGGGCAGGAGCTGTGGGAATGGGCCTCACCGCCGTCGGCACCAATGCAATCGCAATGAGCATGTTGATC AGGGATGCCACATTTGGCCCGATAGCAACGGCATCCGGTTTTGTTTCAGTCGCTTTCTTCAGCGGGTTCGCATCCGGCCC GCCCCTTTATAGCGAGTTTTCGAATTATTCCGGCAACTCCCAGTCTTCCTGGGGCTTGTTGATCGGCGTGCTCTTGTGCG GGTGCCTGACGGCCCTGGGACTGGCTTCTGCCCGACGGCGCAAGGCGCAAACACCGGCGCCAACTGGCGCGGTTCAGCGC GCGACTACCGCAAAGGTGCAAGAACCTGTGAAGCCATGA
Upstream 100 bases:
>100_bases GCGCGCACGTCGCGAATTCTCGACGGCACCGACGAGTCGCTTATCAGTTCGACAGGCCGCCGGCTCATCGACTTCTTCAA GGAAGAGGACGTTTATCATT
Downstream 100 bases:
>100_bases ATCCAATAACTCCCATGATCTCGCGCAAGAGTAATCCAAGCAGCGCAAGAAGACAGTTTAGTGTTTGTAATTAAGGAACC GCTGAACAAATCCTCCGCAG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Protein; Facilitator Superfamily Transporter; Facilitator Transporter; ABC Transporter; Arabinose Efflux Permease-Like Protein; Facilitator Superfamily Permease
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MAKSLFAGIWFRIVLVFAMALPMLVLYAISTLGPFLVRDLRFEPGLPGYLVMSAFGIAAILSLWSGAFVDRIGTRRALAV LFFAVALAFALIATVEDYYSLVAAAAICGIAQALANPVTNLLIAQHVSPEKKATVVGFKQSGVQLAALFAGLILPAIATQ YGWHAAFGIVVPVAILFGITTPFIAPRKPSETRKAFTVPLPNVLLLRLMAIQFCVGIALSAFVTFLPTFAVRQGMALSVA GSLIAVFGVMGILSRITLTPLGARMKDESLLLIVLIAIAACAIAVTMRANADSHWPLWAGAVGMGLTAVGTNAIAMSMLI RDATFGPIATASGFVSVAFFSGFASGPPLYSEFSNYSGNSQSSWGLLIGVLLCGCLTALGLASARRRKAQTPAPTGAVQR ATTAKVQEPVKP
Sequences:
>Translated_412_residues MAKSLFAGIWFRIVLVFAMALPMLVLYAISTLGPFLVRDLRFEPGLPGYLVMSAFGIAAILSLWSGAFVDRIGTRRALAV LFFAVALAFALIATVEDYYSLVAAAAICGIAQALANPVTNLLIAQHVSPEKKATVVGFKQSGVQLAALFAGLILPAIATQ YGWHAAFGIVVPVAILFGITTPFIAPRKPSETRKAFTVPLPNVLLLRLMAIQFCVGIALSAFVTFLPTFAVRQGMALSVA GSLIAVFGVMGILSRITLTPLGARMKDESLLLIVLIAIAACAIAVTMRANADSHWPLWAGAVGMGLTAVGTNAIAMSMLI RDATFGPIATASGFVSVAFFSGFASGPPLYSEFSNYSGNSQSSWGLLIGVLLCGCLTALGLASARRRKAQTPAPTGAVQR ATTAKVQEPVKP >Mature_411_residues AKSLFAGIWFRIVLVFAMALPMLVLYAISTLGPFLVRDLRFEPGLPGYLVMSAFGIAAILSLWSGAFVDRIGTRRALAVL FFAVALAFALIATVEDYYSLVAAAAICGIAQALANPVTNLLIAQHVSPEKKATVVGFKQSGVQLAALFAGLILPAIATQY GWHAAFGIVVPVAILFGITTPFIAPRKPSETRKAFTVPLPNVLLLRLMAIQFCVGIALSAFVTFLPTFAVRQGMALSVAG SLIAVFGVMGILSRITLTPLGARMKDESLLLIVLIAIAACAIAVTMRANADSHWPLWAGAVGMGLTAVGTNAIAMSMLIR DATFGPIATASGFVSVAFFSGFASGPPLYSEFSNYSGNSQSSWGLLIGVLLCGCLTALGLASARRRKAQTPAPTGAVQRA TTAKVQEPVKP
Specific function: Intake Of Galactonate Into The Cell. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43168; Mature: 43037
Theoretical pI: Translated: 10.56; Mature: 10.56
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSLFAGIWFRIVLVFAMALPMLVLYAISTLGPFLVRDLRFEPGLPGYLVMSAFGIAAI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSLWSGAFVDRIGTRRALAVLFFAVALAFALIATVEDYYSLVAAAAICGIAQALANPVTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIAQHVSPEKKATVVGFKQSGVQLAALFAGLILPAIATQYGWHAAFGIVVPVAILFGIT HHHHHCCCCCHHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPFIAPRKPSETRKAFTVPLPNVLLLRLMAIQFCVGIALSAFVTFLPTFAVRQGMALSVA CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GSLIAVFGVMGILSRITLTPLGARMKDESLLLIVLIAIAACAIAVTMRANADSHWPLWAG HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AVGMGLTAVGTNAIAMSMLIRDATFGPIATASGFVSVAFFSGFASGPPLYSEFSNYSGNS HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC QSSWGLLIGVLLCGCLTALGLASARRRKAQTPAPTGAVQRATTAKVQEPVKP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC >Mature Secondary Structure AKSLFAGIWFRIVLVFAMALPMLVLYAISTLGPFLVRDLRFEPGLPGYLVMSAFGIAAI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LSLWSGAFVDRIGTRRALAVLFFAVALAFALIATVEDYYSLVAAAAICGIAQALANPVTN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLIAQHVSPEKKATVVGFKQSGVQLAALFAGLILPAIATQYGWHAAFGIVVPVAILFGIT HHHHHCCCCCHHHEEEEEHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TPFIAPRKPSETRKAFTVPLPNVLLLRLMAIQFCVGIALSAFVTFLPTFAVRQGMALSVA CCCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH GSLIAVFGVMGILSRITLTPLGARMKDESLLLIVLIAIAACAIAVTMRANADSHWPLWAG HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH AVGMGLTAVGTNAIAMSMLIRDATFGPIATASGFVSVAFFSGFASGPPLYSEFSNYSGNS HHHCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCC QSSWGLLIGVLLCGCLTALGLASARRRKAQTPAPTGAVQRATTAKVQEPVKP CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA