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The map label for this gene is nuc [H]

Identifier: 82702081

GI number: 82702081

Start: 1104510

End: 1104983

Strand: Direct

Name: nuc [H]

Synonym: Nmul_A0952

Alternate gene names: 82702081

Gene position: 1104510-1104983 (Clockwise)

Preceding gene: 82702080

Following gene: 82702082

Centisome position: 34.69

GC content: 52.74

Gene sequence:

>474_bases
ATGCCGCGTATTCTGGTTGCTCTGGCAATCGGGTTTTCCAGTTTTCTTCCTTGCCTGGCTTATGCTGACCTCACCGGTCA
GGTAATTCATGTCACGGATGGAGACACTCTTACCCTTGTAATAAACAAGGAATGGGTAAGGGCACGCCTTGCGGGCATCG
ATGCGCCCGAAGCGAATCAGCCTTTTGGCAAGCTTTCCAGGGAATCTCTCTCTGATCTTTGTTTCTGGCAGCAGGTTACG
GTTATTCCGAAAGGAAAAGACCAATATGGCCGCATCTTTGCCCAAGTCCTCTGTGGTGATGTCGATGCCGGGGCCGAGCA
GGTACGGCGCGGCATGGCCTGGGTTTATGATCACTATGTAAAAGAGAGTGACCTCCAGCCCCTTCAGGATGATGCGAAGG
CTGCAAAGCGTGGTTTGTGGGCGGATCCCTATTCAAAGCCGCCATGGAAATGGCGCGAAGTGTGGAAGGAATGA

Upstream 100 bases:

>100_bases
CAGATTTTGTACTATCACAGCTCCCTGCCTTGTCACTTGCGCTCGCAGTTGCGCATTCACAGGTTCGGTTCTTTCGGGGA
GATGGATCGAGGCGACTGCA

Downstream 100 bases:

>100_bases
AGATTTGACGTGAAGCTTCGTGACACGTTGAGTCTCTCCATCAGAACCGTTGCCAGCTACCGCACCCGTTCGTTGCTCAT
CATTCTGGCAATGTCATTGG

Product: nuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 157; Mature: 156

Protein sequence:

>157_residues
MPRILVALAIGFSSFLPCLAYADLTGQVIHVTDGDTLTLVINKEWVRARLAGIDAPEANQPFGKLSRESLSDLCFWQQVT
VIPKGKDQYGRIFAQVLCGDVDAGAEQVRRGMAWVYDHYVKESDLQPLQDDAKAAKRGLWADPYSKPPWKWREVWKE

Sequences:

>Translated_157_residues
MPRILVALAIGFSSFLPCLAYADLTGQVIHVTDGDTLTLVINKEWVRARLAGIDAPEANQPFGKLSRESLSDLCFWQQVT
VIPKGKDQYGRIFAQVLCGDVDAGAEQVRRGMAWVYDHYVKESDLQPLQDDAKAAKRGLWADPYSKPPWKWREVWKE
>Mature_156_residues
PRILVALAIGFSSFLPCLAYADLTGQVIHVTDGDTLTLVINKEWVRARLAGIDAPEANQPFGKLSRESLSDLCFWQQVTV
IPKGKDQYGRIFAQVLCGDVDAGAEQVRRGMAWVYDHYVKESDLQPLQDDAKAAKRGLWADPYSKPPWKWREVWKE

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the thermonuclease family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016071
- InterPro:   IPR006021
- InterPro:   IPR002071 [H]

Pfam domain/function: PF00565 SNase [H]

EC number: =3.1.31.1 [H]

Molecular weight: Translated: 17720; Mature: 17589

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS01123 TNASE_1 ; PS50830 TNASE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRILVALAIGFSSFLPCLAYADLTGQVIHVTDGDTLTLVINKEWVRARLAGIDAPEANQ
CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECHHHHHHHHHCCCCCCCCC
PFGKLSRESLSDLCFWQQVTVIPKGKDQYGRIFAQVLCGDVDAGAEQVRRGMAWVYDHYV
CHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KESDLQPLQDDAKAAKRGLWADPYSKPPWKWREVWKE
CCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
>Mature Secondary Structure 
PRILVALAIGFSSFLPCLAYADLTGQVIHVTDGDTLTLVINKEWVRARLAGIDAPEANQ
CHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEECHHHHHHHHHCCCCCCCCC
PFGKLSRESLSDLCFWQQVTVIPKGKDQYGRIFAQVLCGDVDAGAEQVRRGMAWVYDHYV
CHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
KESDLQPLQDDAKAAKRGLWADPYSKPPWKWREVWKE
CCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1560781 [H]