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The map label for this gene is secY [H]

Identifier: 82701920

GI number: 82701920

Start: 904927

End: 906255

Strand: Direct

Name: secY [H]

Synonym: Nmul_A0787

Alternate gene names: 82701920

Gene position: 904927-906255 (Clockwise)

Preceding gene: 82701919

Following gene: 82701921

Centisome position: 28.42

GC content: 52.67

Gene sequence:

>1329_bases
TTGGCCGCTAGCGACTCCCTGCGGGGACTCTCCGGAAAACTCGGCGACTTGAAGCGCCGGTTATGGTTTTTGCTGCTCGC
ATTGGTTGTCTACCGTATCGGCGCGCATGTGCCAGTACCCGGTATCGATCCGGTGGTATTGAAGGATCTGTTCGAATCGC
AGCAGGGCGGCATCCTGGGCATGTTCAACATGTTTTCCGGCGGGGCCCTTTCCCGTTTTTCGATATTTGCCCTGGGTATC
ATGCCGTACATTTCGGCATCGATTATCATGCAGTTGGGCACCGTGGCATTCCCTTATCTCGAGGCCCTGAAGAAAGAGGG
TGAGTCAGGGCGCAGAAAGATTACCCAGTACACCCGGTATGGTACTCTGGGCCTGGCGCTGGTTCAGGGTTATGGCATCT
CGATCGCACTACAATCCCAGCCTGGTCTGGTGATAGAGCCCGGTCCGATGTTCCTGCTGACCACGGTTATAACATTGGTG
ACGGGCACCATATTTCTCATGTGGCTGGGAGAACAGATTACCGAACGCGGCATTGGCAACGGGATTTCGCTCATTATATT
TGCCGGGATTGCTGCAGGTCTTCCAAGTGCAATTGGAGGCACGCTGGAGCTGGTGCGAACGGGCGCCATGCACTTCCTGG
TGGCGCTAGGAATTTTCGTGGCGGCGACGGTGGTTACGGGATTCGTTGTCTTTGTCGAGCGGGGGCAACGCAAGATACTG
GTGAATTATGCAAAGCGTCAGGTTGGACGCAAGGTTTATGGCGGTCAAAGCTCTCACCTGCCTCTTAAGCTGAACATGTC
CGGCGTGATTCCGCCGATCTTTGCTTCCAGCATCATATTGTTTCCCGCCACGCTGGCTGGTTGGTTTTCGACGGGAGAAT
CAATGGACTGGCTAAAGGATATAAGCGGGGCGTTATCGCCTGGACAGCCGGTGTACGTAATCATGTACGCGGCAATGATC
ATATTCTTCTGCTTTTTTTATACGGCCCTGGTGTTCAATCCCAAGGAAACCGCGGAGAACCTGAAAAAAAGCGGAGCATT
CATTCCCGGCATTCGCCCAGGTGATCAAACGGCACGATATATTGAACGCATCATGTTGCGCCTTACTCTCACCGGTGCAA
TTTACGTAACGCTCGTGTGTCTGTTGCCGGAATTTTTGATTTTGAAATGGAATGTTCCATTCTATTTTGGTGGAACTTCC
CTGCTTATCATCGTCGTGGTAACGATGGATTTCATGGCGCAGGTGCAAGCCTACATCATGTCTCATCAGTATGAGAGCCT
CTTGAAAAAAACCAACTTCAAGGGCGGTGGCGGATTGCCGGCGAGATAA

Upstream 100 bases:

>100_bases
AGCGCGCAGTGAAGCTTCAGGGCATTCCCGTAACCAAGGGCGCGAAAGCAGCTATTGAAGCTGCTGGTGGTAGTGTCGAA
TAAGTACGAGAGGATATATA

Downstream 100 bases:

>100_bases
AAGCGCATCAAGGATAGGATGGCAAAGGAAGAAACCATACAAATGCAGGGCGAGATACTGGAAACGTTGCCGAATGCGAC
GTTTCGGGTCAAGCTGGAAA

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MAASDSLRGLSGKLGDLKRRLWFLLLALVVYRIGAHVPVPGIDPVVLKDLFESQQGGILGMFNMFSGGALSRFSIFALGI
MPYISASIIMQLGTVAFPYLEALKKEGESGRRKITQYTRYGTLGLALVQGYGISIALQSQPGLVIEPGPMFLLTTVITLV
TGTIFLMWLGEQITERGIGNGISLIIFAGIAAGLPSAIGGTLELVRTGAMHFLVALGIFVAATVVTGFVVFVERGQRKIL
VNYAKRQVGRKVYGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSTGESMDWLKDISGALSPGQPVYVIMYAAMI
IFFCFFYTALVFNPKETAENLKKSGAFIPGIRPGDQTARYIERIMLRLTLTGAIYVTLVCLLPEFLILKWNVPFYFGGTS
LLIIVVVTMDFMAQVQAYIMSHQYESLLKKTNFKGGGGLPAR

Sequences:

>Translated_442_residues
MAASDSLRGLSGKLGDLKRRLWFLLLALVVYRIGAHVPVPGIDPVVLKDLFESQQGGILGMFNMFSGGALSRFSIFALGI
MPYISASIIMQLGTVAFPYLEALKKEGESGRRKITQYTRYGTLGLALVQGYGISIALQSQPGLVIEPGPMFLLTTVITLV
TGTIFLMWLGEQITERGIGNGISLIIFAGIAAGLPSAIGGTLELVRTGAMHFLVALGIFVAATVVTGFVVFVERGQRKIL
VNYAKRQVGRKVYGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSTGESMDWLKDISGALSPGQPVYVIMYAAMI
IFFCFFYTALVFNPKETAENLKKSGAFIPGIRPGDQTARYIERIMLRLTLTGAIYVTLVCLLPEFLILKWNVPFYFGGTS
LLIIVVVTMDFMAQVQAYIMSHQYESLLKKTNFKGGGGLPAR
>Mature_441_residues
AASDSLRGLSGKLGDLKRRLWFLLLALVVYRIGAHVPVPGIDPVVLKDLFESQQGGILGMFNMFSGGALSRFSIFALGIM
PYISASIIMQLGTVAFPYLEALKKEGESGRRKITQYTRYGTLGLALVQGYGISIALQSQPGLVIEPGPMFLLTTVITLVT
GTIFLMWLGEQITERGIGNGISLIIFAGIAAGLPSAIGGTLELVRTGAMHFLVALGIFVAATVVTGFVVFVERGQRKILV
NYAKRQVGRKVYGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSTGESMDWLKDISGALSPGQPVYVIMYAAMII
FFCFFYTALVFNPKETAENLKKSGAFIPGIRPGDQTARYIERIMLRLTLTGAIYVTLVCLLPEFLILKWNVPFYFGGTSL
LIIVVVTMDFMAQVQAYIMSHQYESLLKKTNFKGGGGLPAR

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=435, Percent_Identity=67.816091954023, Blast_Score=545, Evalue=1e-156,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 48010; Mature: 47879

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS00756 SECY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AASDSLRGLSGKLGDLKRRLWFLLLALVVYRIGAHVPVPGIDPVVLKDLFESQQGGILG
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEE
MFNMFSGGALSRFSIFALGIMPYISASIIMQLGTVAFPYLEALKKEGESGRRKITQYTRY
EHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
GTLGLALVQGYGISIALQSQPGLVIEPGPMFLLTTVITLVTGTIFLMWLGEQITERGIGN
HHHHHHHHHCCCEEEEEECCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GISLIIFAGIAAGLPSAIGGTLELVRTGAMHFLVALGIFVAATVVTGFVVFVERGQRKIL
CHHHHHHHHHHHCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
VNYAKRQVGRKVYGGQSSHLPLKLNMSGVIPPIFASSIILFPATLAGWFSTGESMDWLKD
HHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
ISGALSPGQPVYVIMYAAMIIFFCFFYTALVFNPKETAENLKKSGAFIPGIRPGDQTARY
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCHHHHHH
IERIMLRLTLTGAIYVTLVCLLPEFLILKWNVPFYFGGTSLLIIVVVTMDFMAQVQAYIM
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHH
SHQYESLLKKTNFKGGGGLPAR
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9322765; 10952301 [H]