| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is prrB [H]
Identifier: 82701840
GI number: 82701840
Start: 813223
End: 814491
Strand: Direct
Name: prrB [H]
Synonym: Nmul_A0707
Alternate gene names: 82701840
Gene position: 813223-814491 (Clockwise)
Preceding gene: 82701839
Following gene: 82701841
Centisome position: 25.54
GC content: 54.77
Gene sequence:
>1269_bases GTGCCCGTAATTAGGCGTGGGCTTCGCCTTCGTGTTGCACTTGCGTTTGCGATATTCTGTATTGTTGTTGTCGGAACGCT GGGTGTCAGTCTGTATATCGCTTCCGATGACATCGAAGAAGCTCATATCGAGCAGATCATCGAAACCGAGATGGATTATC TGCTCCAGCGCTATCGCGAGCATGTGGACTTCGTGCCGCAGGAAGGTTCCAATCTCGAAAAATACATCATCCACGATCCC TCCGAAGAATCTCGCCTTCCTTCCTATCTGCAGGGACTGAGTTATAGGCGGCACAAGGTTTTTCGCGGACCGGAGGAAGT GCGGGTCGCGGTCCATCACGTGGACGGGGTCAAGTTTCTTGTCGCCTATGAAATAGGCCTGCACGAAGCGCGGCAACGGG AATTGAAACTGCTCATCGTCCTGTCGCTCATTTCCGTCGTGGGTGTCGCTGTCGTGGTGGGATATCTGCTGGCCGGAGTG CTGGTCAAGCAGGTGACTGATCTCGCCGAGCAGGTGAGGCATCTCGCGCCGGGTGACATTCAGGGGGAAACGCTTACCCA GCCTGGGCAGGATGAGGAGGTGGCGCAGCTCGCTCGCGCGCTGGATGACTATCAAAGCCGTATAACCCGCATGCTGCGCA GGGAACAGGAGTTTACCGCCAATATAAGCCACGAGCTGCGCACTCCGATTACAACTATCCTGACAAGCTGTGAACTGCTG GTCGCGGAACCGAATCTGTCGGAAAGAGCGCGCATGCGCATCGGCATGATCGAAAGTGCCGCAACCCGCATGGGCGAGCA GTTGCAAGCCCTGTTATTTCTTGCGCGCGAGCAGTCGCTCGGGGTAATGGAACCCGTGGATCTGGCCGAGTGTGTCTACG ATGCGGCAGAATCGATATGCGGGGAGATCTATCGAAAGCATCTTACATTCGAAGTCACGGTGGAACCGAAAGCCATGCTG ACGCTGAATCGGCAAGCGATTCACACGGCTCTTGTGAATCTGCTGCGCAATGCGGTGCAATATACCAATAGCGGTTTCAT ACGGGTAAATTTCAAAGGCAATCGTCTTTCCATTTCCGATTCCGGTATAGGTATTGAGCCTTCCTATCTGCCCCTCCTGT ATGAACGCTTCTTCCGCGGTTCCACCCAGGGTGAAGGTCTGGGCATAGGGCTTGCCATCGTAAAGCGCATCTGCGACTAC TATGGATGGAGCATAGAAGTCGAAAGCATGCCCGGACAAGGCGCGACCTTCCATATTGTGTTTCCCTGA
Upstream 100 bases:
>100_bases CTCCGCAGTCACATGCACGAGCTTCGCCGCGCACTGACGCGCGCTGGGGGCTATGATCCAATCGAAACCGTTCACGGTCT CGGCTATCGGCTTTCCACGC
Downstream 100 bases:
>100_bases CCCTCGTTTTTCCTGGAGAAAGTCATTTCCCTGCAGGTTTCCCTGACTGCGCCGACATAGCGGAAGCTCTACAGTTGCCG CTATTCGATCTTCTGCAAAA
Product: periplasmic sensor signal transduction histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPVIRRGLRLRVALAFAIFCIVVVGTLGVSLYIASDDIEEAHIEQIIETEMDYLLQRYREHVDFVPQEGSNLEKYIIHDP SEESRLPSYLQGLSYRRHKVFRGPEEVRVAVHHVDGVKFLVAYEIGLHEARQRELKLLIVLSLISVVGVAVVVGYLLAGV LVKQVTDLAEQVRHLAPGDIQGETLTQPGQDEEVAQLARALDDYQSRITRMLRREQEFTANISHELRTPITTILTSCELL VAEPNLSERARMRIGMIESAATRMGEQLQALLFLAREQSLGVMEPVDLAECVYDAAESICGEIYRKHLTFEVTVEPKAML TLNRQAIHTALVNLLRNAVQYTNSGFIRVNFKGNRLSISDSGIGIEPSYLPLLYERFFRGSTQGEGLGIGLAIVKRICDY YGWSIEVESMPGQGATFHIVFP
Sequences:
>Translated_422_residues MPVIRRGLRLRVALAFAIFCIVVVGTLGVSLYIASDDIEEAHIEQIIETEMDYLLQRYREHVDFVPQEGSNLEKYIIHDP SEESRLPSYLQGLSYRRHKVFRGPEEVRVAVHHVDGVKFLVAYEIGLHEARQRELKLLIVLSLISVVGVAVVVGYLLAGV LVKQVTDLAEQVRHLAPGDIQGETLTQPGQDEEVAQLARALDDYQSRITRMLRREQEFTANISHELRTPITTILTSCELL VAEPNLSERARMRIGMIESAATRMGEQLQALLFLAREQSLGVMEPVDLAECVYDAAESICGEIYRKHLTFEVTVEPKAML TLNRQAIHTALVNLLRNAVQYTNSGFIRVNFKGNRLSISDSGIGIEPSYLPLLYERFFRGSTQGEGLGIGLAIVKRICDY YGWSIEVESMPGQGATFHIVFP >Mature_421_residues PVIRRGLRLRVALAFAIFCIVVVGTLGVSLYIASDDIEEAHIEQIIETEMDYLLQRYREHVDFVPQEGSNLEKYIIHDPS EESRLPSYLQGLSYRRHKVFRGPEEVRVAVHHVDGVKFLVAYEIGLHEARQRELKLLIVLSLISVVGVAVVVGYLLAGVL VKQVTDLAEQVRHLAPGDIQGETLTQPGQDEEVAQLARALDDYQSRITRMLRREQEFTANISHELRTPITTILTSCELLV AEPNLSERARMRIGMIESAATRMGEQLQALLFLAREQSLGVMEPVDLAECVYDAAESICGEIYRKHLTFEVTVEPKAMLT LNRQAIHTALVNLLRNAVQYTNSGFIRVNFKGNRLSISDSGIGIEPSYLPLLYERFFRGSTQGEGLGIGLAIVKRICDYY GWSIEVESMPGQGATFHIVFP
Specific function: Member of the two-component regulatory system prrB/prrA. Involved specifically in early intracellular multiplication of Mycobacterium. Probably phosphorylates prrA [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1786783, Length=331, Percent_Identity=27.7945619335347, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI1786600, Length=219, Percent_Identity=30.1369863013699, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1789403, Length=273, Percent_Identity=29.3040293040293, Blast_Score=82, Evalue=5e-17, Organism=Escherichia coli, GI48994928, Length=236, Percent_Identity=28.8135593220339, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI145693157, Length=217, Percent_Identity=29.0322580645161, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1790346, Length=272, Percent_Identity=26.1029411764706, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790436, Length=225, Percent_Identity=25.7777777777778, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI87081816, Length=222, Percent_Identity=27.4774774774775, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1786912, Length=222, Percent_Identity=27.9279279279279, Blast_Score=73, Evalue=3e-14, Organism=Escherichia coli, GI1789808, Length=370, Percent_Identity=24.0540540540541, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788713, Length=247, Percent_Identity=26.7206477732794, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI1788393, Length=279, Percent_Identity=25.4480286738351, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1790551, Length=248, Percent_Identity=29.4354838709677, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788549, Length=216, Percent_Identity=27.3148148148148, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788279, Length=319, Percent_Identity=25.705329153605, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1789149, Length=235, Percent_Identity=25.1063829787234, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR003660 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 47405; Mature: 47274
Theoretical pI: Translated: 5.63; Mature: 5.63
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVIRRGLRLRVALAFAIFCIVVVGTLGVSLYIASDDIEEAHIEQIIETEMDYLLQRYRE CCCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH HVDFVPQEGSNLEKYIIHDPSEESRLPSYLQGLSYRRHKVFRGPEEVRVAVHHVDGVKFL HCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEHHHHCCCEEEE VAYEIGLHEARQRELKLLIVLSLISVVGVAVVVGYLLAGVLVKQVTDLAEQVRHLAPGDI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QGETLTQPGQDEEVAQLARALDDYQSRITRMLRREQEFTANISHELRTPITTILTSCELL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHE VAEPNLSERARMRIGMIESAATRMGEQLQALLFLAREQSLGVMEPVDLAECVYDAAESIC EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GEIYRKHLTFEVTVEPKAMLTLNRQAIHTALVNLLRNAVQYTNSGFIRVNFKGNRLSISD HHHHHHHCEEEEEECCHHHEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECC SGIGIEPSYLPLLYERFFRGSTQGEGLGIGLAIVKRICDYYGWSIEVESMPGQGATFHIV CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEE FP CC >Mature Secondary Structure PVIRRGLRLRVALAFAIFCIVVVGTLGVSLYIASDDIEEAHIEQIIETEMDYLLQRYRE CCHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH HVDFVPQEGSNLEKYIIHDPSEESRLPSYLQGLSYRRHKVFRGPEEVRVAVHHVDGVKFL HCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHEEHHHHCCCEEEE VAYEIGLHEARQRELKLLIVLSLISVVGVAVVVGYLLAGVLVKQVTDLAEQVRHLAPGDI EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QGETLTQPGQDEEVAQLARALDDYQSRITRMLRREQEFTANISHELRTPITTILTSCELL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCHHE VAEPNLSERARMRIGMIESAATRMGEQLQALLFLAREQSLGVMEPVDLAECVYDAAESIC EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH GEIYRKHLTFEVTVEPKAMLTLNRQAIHTALVNLLRNAVQYTNSGFIRVNFKGNRLSISD HHHHHHHCEEEEEECCHHHEEECHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCEEEECC SGIGIEPSYLPLLYERFFRGSTQGEGLGIGLAIVKRICDYYGWSIEVESMPGQGATFHIV CCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCEEEEE FP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]