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The map label for this gene is nifU [H]

Identifier: 82701834

GI number: 82701834

Start: 807638

End: 808198

Strand: Direct

Name: nifU [H]

Synonym: Nmul_A0701

Alternate gene names: 82701834

Gene position: 807638-808198 (Clockwise)

Preceding gene: 82701833

Following gene: 82701835

Centisome position: 25.36

GC content: 55.26

Gene sequence:

>561_bases
ATGCCGAAGATTGTTGAAATAGAGGGAACCCCCAATCGAAATGCATTGAAATTCATCCTCAAGGAGCCGCTGACCTGGGG
GGTAACACGTTCGTATGATAATGCCGAGCAGGCGAAAGGCGACCCGCTTGCCGAAGCGCTGTTTGACATCGATCATGTCA
CCAATGTGTTTTATGTAGATCGGTGGATCACAGTGACCCAGGATGGCGCGGCTGACTGGCAAGACCTGGCACGCGAAGTA
GCAGATCCTATTCGCGCCGCGCCGGCGGCGGATGCCCAGACAGCCGCTACAATTGCAGCTGCGGGTGCGGAAATTGCAAA
TTTAAGCCCTGAGGACCAGCAGCGGCTTAATTTGATCAACGAAATGCTCGACGAGGAGATTCGCCCCTACCTTCAGAGCG
ATGGAGGCGATCTCCATGTACTTGGCCTTGAAGGCAACAGGCTGAGTGTTCACTACCAGGGTGCTTGCGGCACCTGTCCG
AGCTCGATTACCGGTACTCTGCGCGGCATTCAGAACATGCTGAGGTCGATAGAGCCCGACCTGGAAGTTGTTGCGGTCTG
A

Upstream 100 bases:

>100_bases
GCAGCGCTCAATTCCGTCAGCACCACCTCAACCGAAGCAGAGGATGATCCCATGCATGCCGCAATAGGGGATGCCTGAGC
TTTTCGTCAAGGTACCAAAA

Downstream 100 bases:

>100_bases
TATATCTGCCGCGGCATAATCCGGTGCGCCCCGCGACCCCTACGGACGGATGCCACTGTAATCAACCTTCCGGGAAGGGA
GGCTTTTTCACTTCTCGAGT

Product: nitrogen-fixing NifU-like

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 185

Protein sequence:

>186_residues
MPKIVEIEGTPNRNALKFILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVDRWITVTQDGAADWQDLAREV
ADPIRAAPAADAQTAATIAAAGAEIANLSPEDQQRLNLINEMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCP
SSITGTLRGIQNMLRSIEPDLEVVAV

Sequences:

>Translated_186_residues
MPKIVEIEGTPNRNALKFILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVDRWITVTQDGAADWQDLAREV
ADPIRAAPAADAQTAATIAAAGAEIANLSPEDQQRLNLINEMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCP
SSITGTLRGIQNMLRSIEPDLEVVAV
>Mature_185_residues
PKIVEIEGTPNRNALKFILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVDRWITVTQDGAADWQDLAREVA
DPIRAAPAADAQTAATIAAAGAEIANLSPEDQQRLNLINEMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCPS
SITGTLRGIQNMLRSIEPDLEVVAV

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

Organism=Homo sapiens, GI50593025, Length=187, Percent_Identity=35.2941176470588, Blast_Score=103, Evalue=6e-23,
Organism=Homo sapiens, GI50593021, Length=187, Percent_Identity=35.2941176470588, Blast_Score=103, Evalue=7e-23,
Organism=Homo sapiens, GI50593023, Length=76, Percent_Identity=44.7368421052632, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI50593019, Length=76, Percent_Identity=44.7368421052632, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17541876, Length=186, Percent_Identity=33.8709677419355, Blast_Score=103, Evalue=7e-23,
Organism=Drosophila melanogaster, GI45551492, Length=188, Percent_Identity=32.9787234042553, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI24643765, Length=188, Percent_Identity=32.9787234042553, Blast_Score=103, Evalue=8e-23,
Organism=Drosophila melanogaster, GI45556188, Length=188, Percent_Identity=32.9787234042553, Blast_Score=103, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001075
- ProDom:   PD002830 [H]

Pfam domain/function: PF01106 NifU [H]

EC number: NA

Molecular weight: Translated: 20238; Mature: 20107

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIVEIEGTPNRNALKFILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVD
CCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEE
RWITVTQDGAADWQDLAREVADPIRAAPAADAQTAATIAAAGAEIANLSPEDQQRLNLIN
EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHH
EMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCPSSITGTLRGIQNMLRSIEPD
HHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC
LEVVAV
EEEEEC
>Mature Secondary Structure 
PKIVEIEGTPNRNALKFILKEPLTWGVTRSYDNAEQAKGDPLAEALFDIDHVTNVFYVD
CCEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHEEEEE
RWITVTQDGAADWQDLAREVADPIRAAPAADAQTAATIAAAGAEIANLSPEDQQRLNLIN
EEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCHHHCCCCCHHHHHHHHH
EMLDEEIRPYLQSDGGDLHVLGLEGNRLSVHYQGACGTCPSSITGTLRGIQNMLRSIEPD
HHHHHHHHHHHHCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCC
LEVVAV
EEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8424961 [H]