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The map label for this gene is recJ [H]

Identifier: 82701773

GI number: 82701773

Start: 734129

End: 735970

Strand: Reverse

Name: recJ [H]

Synonym: Nmul_A0640

Alternate gene names: 82701773

Gene position: 735970-734129 (Counterclockwise)

Preceding gene: 82701774

Following gene: 82701772

Centisome position: 23.11

GC content: 55.54

Gene sequence:

>1842_bases
ATGCCCAATATCATCGTCCGCGATTACCCTCACCAGACTTTTGATACACTGATCCGGCACGGTTTCCACCCCGTCCTGGC
CCGTGTCTATTCTGCGCGCGGTATCGAAGAGCCAGGCCAGCTCGAGATCGATTGGTCCCGGCTGATTCCCTTTGCACGCC
TGAAGAATGCAACGGCAATGGCGCAATTTCTTGCCACGGCGATTGCGCTCCGCAAGCGCCTGCTGATCGTAGCCGATTAT
GATTCTGATGGCGCCACGGCTTGCGCCGTAGGAATACGCGCATTGAGGAAATTCGGTGCCCAGGTCGACTACCTCGTTCC
CAATCGCTTCGAGTACGGCTATGGACTTACCCCGGAGATCGTACGGGTGGCTGCCGCCGGCGTTCACCGCCCGGATATTC
TGATTACGGTCGATAATGGCATTGCCAGCGTGGAAGGAGTTGCCGAGGCCAATCGCCTCGGAATGCAGGTTCTCGTCACT
GATCATCATCTTCCCGGCGATACGCTGCCTGAGGCGGCCGTCATCGTCAATCCCAACCAGCCCGGCTGTGATTTTCCCAG
CAAACACCTCTCTGGTGTAGGCGTCATGTTCTATGTCATGCTCGCCCTGCGGGCGGAGTTGCGGGCAAAAGGCATGTTTG
CATCTCCGCAGCAGGAACCAAATCTGGGAAGCCTGCTGGATCTGGTTGCGCTGGGCACGGTGGCAGATGTCGTGAAGCTC
GACGACAACAATCGGCTTCTGGTACAGCAAGGTTTGAAACGCATTCGCAAGGGCAGCGGATGTGCAGGCATCAATGCTCT
GATCAACATCGCCTGCCGTAATTTCAGTCAAACTTCCACTTACGAATTGGGTTTCATGATTGGACCGAGACTGAACGCGG
CAGGACGGCTGGACGATATGTCCCTGGGCATTGAGTGCCTCATTACCGATGATCCCCCGCGTGCTGCCCAGCTTGCGCTA
CAACTGGACACATTCAATCGCAAGCGGCAGGAAATCGAATCCCACATGCGGGATAGTGCGCTGAACATGCTGGAGAATAT
CTTTTCTGGTAGCAGTGGTTTGCAGGACTCGCCCACGCTGCGGCCATCGGATATGCCTCAGAGGTCAGGCGTATTCCGCT
CCCATGATTCCCCGCAAGAAGGGACGAGCGCCTATGCCTTGACCCTCTTCGATCCTGGCTGGCATCAAGGGGTAATCGGC
ATACTGGCGTCACGCATAAAGGATAAATTTCATCGCCCGGTGATCACATTTGCACCGGGAGGCCAGGATGAGCTGAAAGG
ATCGGGGCGGTCCATACCGGGCTTTCACTTGAGAGATGCGCTGGATCTGGTTTCCAAACGCTATCCCGGGCTTTTGCTTA
AATTCGGCGGTCATTCCGCGGCAGCGGGGCTGACTATTCGTACATGCGATTTCGAAAAATTCCGTGCCGCCTTCGAACAA
ACTGCCAGGGAATTGCTGGGACCGGCGGATCTCAAGCGGGTCATCGAAACCGACGGCGACCTGGATGAATCCGAAATAAC
TCTGGAACTGGCGGAACAGCTGGTGCGTCAGGTATGGGGACAGGGATTCCCGCAACCTGCATTTCGCAGCCGCTTTCATG
TGGAAGACCAGCGTGTCGTCGGACAAAAACACCTTAAATTGAAATTAAGAAAGGCGCGGCCCGCAGCCGGAAACAACCCG
CCGGAGAAACCGGTCCTTCTTTATGACGCCATACTGTTCCTCCAAGACGGTCCTCTTCCCGGGGTAATAGATGCCGTTTA
CCGGTTACAGGTAAATGATTTCAAGAGTGATGTTTCCCTGCAATTCATCCTGGAGCATTGGTCAGAAGCAACCATGATGT
AA

Upstream 100 bases:

>100_bases
CGGTATTGGAGCGCACTATCATTTCTGAGCGCTCATCACTGTAAAGAAACCGGGAAGCGTAAAGCGTTATACTGGCAAGT
CTGAGCCTTCTGTCCCTGAC

Downstream 100 bases:

>100_bases
TCACAATTCCCGCTCATTCCGCGTGCCCGCGTTTACCCAGGATGTCTGCTCCATGACTGGCATATAATATTCGACCGGCC
AGCATGAGGCCGCGACCCGG

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 613; Mature: 612

Protein sequence:

>613_residues
MPNIIVRDYPHQTFDTLIRHGFHPVLARVYSARGIEEPGQLEIDWSRLIPFARLKNATAMAQFLATAIALRKRLLIVADY
DSDGATACAVGIRALRKFGAQVDYLVPNRFEYGYGLTPEIVRVAAAGVHRPDILITVDNGIASVEGVAEANRLGMQVLVT
DHHLPGDTLPEAAVIVNPNQPGCDFPSKHLSGVGVMFYVMLALRAELRAKGMFASPQQEPNLGSLLDLVALGTVADVVKL
DDNNRLLVQQGLKRIRKGSGCAGINALINIACRNFSQTSTYELGFMIGPRLNAAGRLDDMSLGIECLITDDPPRAAQLAL
QLDTFNRKRQEIESHMRDSALNMLENIFSGSSGLQDSPTLRPSDMPQRSGVFRSHDSPQEGTSAYALTLFDPGWHQGVIG
ILASRIKDKFHRPVITFAPGGQDELKGSGRSIPGFHLRDALDLVSKRYPGLLLKFGGHSAAAGLTIRTCDFEKFRAAFEQ
TARELLGPADLKRVIETDGDLDESEITLELAEQLVRQVWGQGFPQPAFRSRFHVEDQRVVGQKHLKLKLRKARPAAGNNP
PEKPVLLYDAILFLQDGPLPGVIDAVYRLQVNDFKSDVSLQFILEHWSEATMM

Sequences:

>Translated_613_residues
MPNIIVRDYPHQTFDTLIRHGFHPVLARVYSARGIEEPGQLEIDWSRLIPFARLKNATAMAQFLATAIALRKRLLIVADY
DSDGATACAVGIRALRKFGAQVDYLVPNRFEYGYGLTPEIVRVAAAGVHRPDILITVDNGIASVEGVAEANRLGMQVLVT
DHHLPGDTLPEAAVIVNPNQPGCDFPSKHLSGVGVMFYVMLALRAELRAKGMFASPQQEPNLGSLLDLVALGTVADVVKL
DDNNRLLVQQGLKRIRKGSGCAGINALINIACRNFSQTSTYELGFMIGPRLNAAGRLDDMSLGIECLITDDPPRAAQLAL
QLDTFNRKRQEIESHMRDSALNMLENIFSGSSGLQDSPTLRPSDMPQRSGVFRSHDSPQEGTSAYALTLFDPGWHQGVIG
ILASRIKDKFHRPVITFAPGGQDELKGSGRSIPGFHLRDALDLVSKRYPGLLLKFGGHSAAAGLTIRTCDFEKFRAAFEQ
TARELLGPADLKRVIETDGDLDESEITLELAEQLVRQVWGQGFPQPAFRSRFHVEDQRVVGQKHLKLKLRKARPAAGNNP
PEKPVLLYDAILFLQDGPLPGVIDAVYRLQVNDFKSDVSLQFILEHWSEATMM
>Mature_612_residues
PNIIVRDYPHQTFDTLIRHGFHPVLARVYSARGIEEPGQLEIDWSRLIPFARLKNATAMAQFLATAIALRKRLLIVADYD
SDGATACAVGIRALRKFGAQVDYLVPNRFEYGYGLTPEIVRVAAAGVHRPDILITVDNGIASVEGVAEANRLGMQVLVTD
HHLPGDTLPEAAVIVNPNQPGCDFPSKHLSGVGVMFYVMLALRAELRAKGMFASPQQEPNLGSLLDLVALGTVADVVKLD
DNNRLLVQQGLKRIRKGSGCAGINALINIACRNFSQTSTYELGFMIGPRLNAAGRLDDMSLGIECLITDDPPRAAQLALQ
LDTFNRKRQEIESHMRDSALNMLENIFSGSSGLQDSPTLRPSDMPQRSGVFRSHDSPQEGTSAYALTLFDPGWHQGVIGI
LASRIKDKFHRPVITFAPGGQDELKGSGRSIPGFHLRDALDLVSKRYPGLLLKFGGHSAAAGLTIRTCDFEKFRAAFEQT
ARELLGPADLKRVIETDGDLDESEITLELAEQLVRQVWGQGFPQPAFRSRFHVEDQRVVGQKHLKLKLRKARPAAGNNPP
EKPVLLYDAILFLQDGPLPGVIDAVYRLQVNDFKSDVSLQFILEHWSEATMM

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=592, Percent_Identity=45.2702702702703, Blast_Score=474, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 67459; Mature: 67328

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNIIVRDYPHQTFDTLIRHGFHPVLARVYSARGIEEPGQLEIDWSRLIPFARLKNATAM
CCCCEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEHHHCCCHHHHHHHHHH
AQFLATAIALRKRLLIVADYDSDGATACAVGIRALRKFGAQVDYLVPNRFEYGYGLTPEI
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHH
VRVAAAGVHRPDILITVDNGIASVEGVAEANRLGMQVLVTDHHLPGDTLPEAAVIVNPNQ
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCC
PGCDFPSKHLSGVGVMFYVMLALRAELRAKGMFASPQQEPNLGSLLDLVALGTVADVVKL
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEE
DDNNRLLVQQGLKRIRKGSGCAGINALINIACRNFSQTSTYELGFMIGPRLNAAGRLDDM
CCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCC
SLGIECLITDDPPRAAQLALQLDTFNRKRQEIESHMRDSALNMLENIFSGSSGLQDSPTL
CCCEEEEEECCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RPSDMPQRSGVFRSHDSPQEGTSAYALTLFDPGWHQGVIGILASRIKDKFHRPVITFAPG
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCC
GQDELKGSGRSIPGFHLRDALDLVSKRYPGLLLKFGGHSAAAGLTIRTCDFEKFRAAFEQ
CHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHHH
TARELLGPADLKRVIETDGDLDESEITLELAEQLVRQVWGQGFPQPAFRSRFHVEDQRVV
HHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHH
GQKHLKLKLRKARPAAGNNPPEKPVLLYDAILFLQDGPLPGVIDAVYRLQVNDFKSDVSL
HHHHHEEEEECCCCCCCCCCCCCCEEHEEHHHHEECCCCCHHHHHHHHHHHHHCCCCHHH
QFILEHWSEATMM
HHHHHHHHHHCCC
>Mature Secondary Structure 
PNIIVRDYPHQTFDTLIRHGFHPVLARVYSARGIEEPGQLEIDWSRLIPFARLKNATAM
CCCEEECCCCHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEEHHHCCCHHHHHHHHHH
AQFLATAIALRKRLLIVADYDSDGATACAVGIRALRKFGAQVDYLVPNRFEYGYGLTPEI
HHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHH
VRVAAAGVHRPDILITVDNGIASVEGVAEANRLGMQVLVTDHHLPGDTLPEAAVIVNPNQ
HHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCEEEECCCC
PGCDFPSKHLSGVGVMFYVMLALRAELRAKGMFASPQQEPNLGSLLDLVALGTVADVVKL
CCCCCCHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEE
DDNNRLLVQQGLKRIRKGSGCAGINALINIACRNFSQTSTYELGFMIGPRLNAAGRLDDM
CCCCEEHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCC
SLGIECLITDDPPRAAQLALQLDTFNRKRQEIESHMRDSALNMLENIFSGSSGLQDSPTL
CCCEEEEEECCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
RPSDMPQRSGVFRSHDSPQEGTSAYALTLFDPGWHQGVIGILASRIKDKFHRPVITFAPG
CCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEECCC
GQDELKGSGRSIPGFHLRDALDLVSKRYPGLLLKFGGHSAAAGLTIRTCDFEKFRAAFEQ
CHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCHHHHHHHHHH
TARELLGPADLKRVIETDGDLDESEITLELAEQLVRQVWGQGFPQPAFRSRFHVEDQRVV
HHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCHHHHH
GQKHLKLKLRKARPAAGNNPPEKPVLLYDAILFLQDGPLPGVIDAVYRLQVNDFKSDVSL
HHHHHEEEEECCCCCCCCCCCCCCEEHEEHHHHEECCCCCHHHHHHHHHHHHHCCCCHHH
QFILEHWSEATMM
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]