Click here to switch to the map view.

The map label for this gene is cirA [C]

Identifier: 82701768

GI number: 82701768

Start: 723668

End: 726292

Strand: Direct

Name: cirA [C]

Synonym: Nmul_A0635

Alternate gene names: 82701768

Gene position: 723668-726292 (Clockwise)

Preceding gene: 82701767

Following gene: 82701770

Centisome position: 22.73

GC content: 53.49

Gene sequence:

>2625_bases
ATGAAACGGATTCCTTTTGCACTGGTCGGTTTGCTTTGCGTCCCGTCGGCGTGGGCGATGCAAGAGATAGAGCAGCCAAA
ACAGTTTTCCCAGAAAAGAATACCGGTTCGTCTACCGGCTACCAGTCTATCCATGAACCCGGCGCAGTCAGATACCCCCG
TTTCATCGATGGGAAGTGAGACGCGCTCGGGAATGCTGGTGGCGGAAGCGACAGCCGTAACGACATCCGGTCAACCGCAG
ACCGGTGAAACTGGCACCGGCAAACCGGATAAGGATAGAGAGGATAAGGAGAACAAGGGCGGCAAGGAAAAGAAAGACGA
TATTCCGGCAGTTCAAAAGGAAACCGTCTTCAAGGAAATGGTGGTCACTGGAGAGACGGAGCGGGACACGCACTTTACTT
CGCCCTCGACACGTGTGACGCGAGCTCAGATCGAGCGGCAGAATGCGCAGACCACGGAGGAAGTGCTCAAGTACATGCCC
AGCCTGCAGATCCGCCAGCGCTACGTGGGCGATCCCAATGGTGTCCTGGGTATCCGGGGTGCGGACATGTTCTCAACCGC
GCGCAACATGGTTTATGCGGACGGCCTACCTTTGCACAACTTTCTGCAGGCAACCTTCAATGGTGCGCCGCGTTGGTCGC
TGGTGGGTCCGAACGAGATCGATTCCGTCGATGTCGTGTATGGCCCCTTCTCGGCCGAATACAGCGGCAACTCGATTGGT
GGCGTCGTCAACATAAAAACTCGCATGCCGCACAAGCAGGAATTCTACGTCGAGAGCAGTCTTTTCATCCAGCCGTTCAA
GATTTATGGACCGGACAAAGGAACGTTCATAGGTGACCGACAGTATGTTTCGTACGGTAATCGGATTCAGGATAAGTTTA
CGGTATTTCTTGCCTACAACCGGCTGGAAGCGCAGAGCCATCCCCAGTCTTATTTCATCGACAATACAGGACTATTTGAT
GTGCCCGGGGGAACGCCGGTTAGCGGCGGCATTCGAACCCCGGATACGCGCGGAACGCCCAGCGTCATCTATGGCGATAC
CGGACCGGAAAAGGTGAATACCCACTTGTTCAAGGGTAAATTCGGGTATGACATAACTTCCAATCTTCAGGCGCTCTTTA
CAGTGGCGTATGAAGATCGTACCCGCCACCAGAATCGGCCACGCAATTACCTGCGCGATGGGAGCGGGAATCTGTTCTGG
GGTGGCCCTGCTCCCACCTGCGCGCCCGGTGCTCCCTGTGCTAATCCTGAGAACGCCTTGGGCAATGCTTCCCTGGATGG
GACCCGCTTCGATGTGATGCAGCGTGGTTTTGGCGGGAGTCAGGACAAGCGCGAGACGCTGAACCTGGGTTTATCGCTTC
GCGGCGCCTTGACTCCTGACTGGAATATCGATACCACCATGAGCTATTTCGATGTCCTGAAGGATATTCGCGCTTCGGCC
TTTTTCAATCAGGGTGATCCGGCTAATAGCGGGACTGGGCAGCTCCAGGATTTCCGGAGATTCAGCTGGTTGAATTACGA
TCTCAAGTTGAGCGCGCCCGTGCTGCTTGGCAATGACAAAGTATCGTTTCTGGCCGGATATCACTTCGATCAGTACAACC
TGAGTTTCAGGCAATATTCCCTGACCGATTATTCGACCTTGACCCGCGGCGCATTGCAGGCCAATCGGAACAACGACGGG
CAGACCTCGATGCATGCAATGTTTGCGCAATCCACATTCCGATTCCTGCCGCAATGGGATGTTACCGCGGGAGTACGCCA
GGAGTGGTGGGCGGCAACGAAAGGGGTCGTGGGTAACCTCGAAGTGCCGGATCGCTCCCTGGCGGCAACCTCGCCTAAAG
TTTCAGTGGGATATGAGCCAGGACAGTGGAAATATCGCTATTCCTTCGGTCGAGCGCATCGTTTTCCGGTTATTGCGGAG
CTTTATCAATCCTTGAGCACGCCCACGAGCATACTGACCGCGAATGCAATGCTCAAGCCCGAAAATGGGGTCCATCATAA
CTTCATGGTCGAGTATGGGCTGCCCAAGGGCTATATCAGGGTAAATGCTTTTCGGGACGACATCAAGGATGCCATTCAGC
AGGTAAATACTGTCTCGGGTGTAGTTATTACCAGTGGATTCCAGAATATCGGCCAAGTCAGTACGACTGGAGTGGAACTG
ATCTATGATCAAAGGCGGATTCTGGGTTCAAAACTCGATTTCATGTTCAACGGCACCTGGATGAATGCGAAAGTGGAAAA
AGGACCGATCGTGGATTTTACTACATCTACCGGTGTACCCGCCGACTATAATCTAACCGGTAAGCAGATCATTCGCCTGC
CGCACTGGCGAGCCAATTTTTTCGGCACTTATCATATGACCGAGGCTTGGGATATCTCCCTCTCAGGCCGATATACGAGC
GACTCGTTCAACGATCCCGACAACGGGGATCATGTAAACAACGTATTCGGCTCCCAGAGTGATTTCTTCTTCATGGATTT
CAAGACCAGCTACCGCTACAAGTTCCAGAATGGTCTGAAAAGCCGGTTTTCATTTGGCATCAGCAATCTCAACAACGATA
AAGCCTGGGTGTTTCACCCCTATCCGCAACGCACCTACTTGGTTGAGGCGGCGTTCAGCTATTAG

Upstream 100 bases:

>100_bases
AGACAACGGGTGGCGGAGGTGGGGCGCGGAAAACGAGTGCAAGCATCCGCCATGGCTGTGCTTATCAATAATAAATAAAT
CGAGAAAGATAATTCAGGTC

Downstream 100 bases:

>100_bases
GGAGGTCGGCTGGAAGTGGACCGGTTCCGGCTACTCCAGACATCATTCACCGGAACAGGTTGACTACGCCATCGAGTCCG
ACATGGTTGAGTGCATAAGT

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Protein; NB Dependent Receptor; Outer Membrane Receptor Protein; Ferrisiderophore Receptor Protein; Nb-Dependent Receptor; NB-Dependent Siderophore Receptor; NB-Dependent Receptor Domain Protein; Fe Transport Outer Membrane Receptor Protein

Number of amino acids: Translated: 874; Mature: 874

Protein sequence:

>874_residues
MKRIPFALVGLLCVPSAWAMQEIEQPKQFSQKRIPVRLPATSLSMNPAQSDTPVSSMGSETRSGMLVAEATAVTTSGQPQ
TGETGTGKPDKDREDKENKGGKEKKDDIPAVQKETVFKEMVVTGETERDTHFTSPSTRVTRAQIERQNAQTTEEVLKYMP
SLQIRQRYVGDPNGVLGIRGADMFSTARNMVYADGLPLHNFLQATFNGAPRWSLVGPNEIDSVDVVYGPFSAEYSGNSIG
GVVNIKTRMPHKQEFYVESSLFIQPFKIYGPDKGTFIGDRQYVSYGNRIQDKFTVFLAYNRLEAQSHPQSYFIDNTGLFD
VPGGTPVSGGIRTPDTRGTPSVIYGDTGPEKVNTHLFKGKFGYDITSNLQALFTVAYEDRTRHQNRPRNYLRDGSGNLFW
GGPAPTCAPGAPCANPENALGNASLDGTRFDVMQRGFGGSQDKRETLNLGLSLRGALTPDWNIDTTMSYFDVLKDIRASA
FFNQGDPANSGTGQLQDFRRFSWLNYDLKLSAPVLLGNDKVSFLAGYHFDQYNLSFRQYSLTDYSTLTRGALQANRNNDG
QTSMHAMFAQSTFRFLPQWDVTAGVRQEWWAATKGVVGNLEVPDRSLAATSPKVSVGYEPGQWKYRYSFGRAHRFPVIAE
LYQSLSTPTSILTANAMLKPENGVHHNFMVEYGLPKGYIRVNAFRDDIKDAIQQVNTVSGVVITSGFQNIGQVSTTGVEL
IYDQRRILGSKLDFMFNGTWMNAKVEKGPIVDFTTSTGVPADYNLTGKQIIRLPHWRANFFGTYHMTEAWDISLSGRYTS
DSFNDPDNGDHVNNVFGSQSDFFFMDFKTSYRYKFQNGLKSRFSFGISNLNNDKAWVFHPYPQRTYLVEAAFSY

Sequences:

>Translated_874_residues
MKRIPFALVGLLCVPSAWAMQEIEQPKQFSQKRIPVRLPATSLSMNPAQSDTPVSSMGSETRSGMLVAEATAVTTSGQPQ
TGETGTGKPDKDREDKENKGGKEKKDDIPAVQKETVFKEMVVTGETERDTHFTSPSTRVTRAQIERQNAQTTEEVLKYMP
SLQIRQRYVGDPNGVLGIRGADMFSTARNMVYADGLPLHNFLQATFNGAPRWSLVGPNEIDSVDVVYGPFSAEYSGNSIG
GVVNIKTRMPHKQEFYVESSLFIQPFKIYGPDKGTFIGDRQYVSYGNRIQDKFTVFLAYNRLEAQSHPQSYFIDNTGLFD
VPGGTPVSGGIRTPDTRGTPSVIYGDTGPEKVNTHLFKGKFGYDITSNLQALFTVAYEDRTRHQNRPRNYLRDGSGNLFW
GGPAPTCAPGAPCANPENALGNASLDGTRFDVMQRGFGGSQDKRETLNLGLSLRGALTPDWNIDTTMSYFDVLKDIRASA
FFNQGDPANSGTGQLQDFRRFSWLNYDLKLSAPVLLGNDKVSFLAGYHFDQYNLSFRQYSLTDYSTLTRGALQANRNNDG
QTSMHAMFAQSTFRFLPQWDVTAGVRQEWWAATKGVVGNLEVPDRSLAATSPKVSVGYEPGQWKYRYSFGRAHRFPVIAE
LYQSLSTPTSILTANAMLKPENGVHHNFMVEYGLPKGYIRVNAFRDDIKDAIQQVNTVSGVVITSGFQNIGQVSTTGVEL
IYDQRRILGSKLDFMFNGTWMNAKVEKGPIVDFTTSTGVPADYNLTGKQIIRLPHWRANFFGTYHMTEAWDISLSGRYTS
DSFNDPDNGDHVNNVFGSQSDFFFMDFKTSYRYKFQNGLKSRFSFGISNLNNDKAWVFHPYPQRTYLVEAAFSY
>Mature_874_residues
MKRIPFALVGLLCVPSAWAMQEIEQPKQFSQKRIPVRLPATSLSMNPAQSDTPVSSMGSETRSGMLVAEATAVTTSGQPQ
TGETGTGKPDKDREDKENKGGKEKKDDIPAVQKETVFKEMVVTGETERDTHFTSPSTRVTRAQIERQNAQTTEEVLKYMP
SLQIRQRYVGDPNGVLGIRGADMFSTARNMVYADGLPLHNFLQATFNGAPRWSLVGPNEIDSVDVVYGPFSAEYSGNSIG
GVVNIKTRMPHKQEFYVESSLFIQPFKIYGPDKGTFIGDRQYVSYGNRIQDKFTVFLAYNRLEAQSHPQSYFIDNTGLFD
VPGGTPVSGGIRTPDTRGTPSVIYGDTGPEKVNTHLFKGKFGYDITSNLQALFTVAYEDRTRHQNRPRNYLRDGSGNLFW
GGPAPTCAPGAPCANPENALGNASLDGTRFDVMQRGFGGSQDKRETLNLGLSLRGALTPDWNIDTTMSYFDVLKDIRASA
FFNQGDPANSGTGQLQDFRRFSWLNYDLKLSAPVLLGNDKVSFLAGYHFDQYNLSFRQYSLTDYSTLTRGALQANRNNDG
QTSMHAMFAQSTFRFLPQWDVTAGVRQEWWAATKGVVGNLEVPDRSLAATSPKVSVGYEPGQWKYRYSFGRAHRFPVIAE
LYQSLSTPTSILTANAMLKPENGVHHNFMVEYGLPKGYIRVNAFRDDIKDAIQQVNTVSGVVITSGFQNIGQVSTTGVEL
IYDQRRILGSKLDFMFNGTWMNAKVEKGPIVDFTTSTGVPADYNLTGKQIIRLPHWRANFFGTYHMTEAWDISLSGRYTS
DSFNDPDNGDHVNNVFGSQSDFFFMDFKTSYRYKFQNGLKSRFSFGISNLNNDKAWVFHPYPQRTYLVEAAFSY

Specific function: Not Yet Known. Postulated To Participate In Iron Transport. Outer Membrane Receptor For Colicins Ia And Ib. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Outer Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97588; Mature: 97588

Theoretical pI: Translated: 8.52; Mature: 8.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIPFALVGLLCVPSAWAMQEIEQPKQFSQKRIPVRLPATSLSMNPAQSDTPVSSMGSE
CCCCHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHCCH
TRSGMLVAEATAVTTSGQPQTGETGTGKPDKDREDKENKGGKEKKDDIPAVQKETVFKEM
HHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
VVTGETERDTHFTSPSTRVTRAQIERQNAQTTEEVLKYMPSLQIRQRYVGDPNGVLGIRG
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCEEEECC
ADMFSTARNMVYADGLPLHNFLQATFNGAPRWSLVGPNEIDSVDVVYGPFSAEYSGNSIG
CHHHHHHCCEEEECCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCC
GVVNIKTRMPHKQEFYVESSLFIQPFKIYGPDKGTFIGDRQYVSYGNRIQDKFTVFLAYN
EEEEEEECCCCCHHEEEECCEEEEEEEEECCCCCCEECCHHHHHCCCCCCCEEEEEEEEE
RLEAQSHPQSYFIDNTGLFDVPGGTPVSGGIRTPDTRGTPSVIYGDTGPEKVNTHLFKGK
HHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCEEECCC
FGYDITSNLQALFTVAYEDRTRHQNRPRNYLRDGSGNLFWGGPAPTCAPGAPCANPENAL
CCCCHHCCCEEEEEEEECHHHHHCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHCC
GNASLDGTRFDVMQRGFGGSQDKRETLNLGLSLRGALTPDWNIDTTMSYFDVLKDIRASA
CCCCCCCHHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
FFNQGDPANSGTGQLQDFRRFSWLNYDLKLSAPVLLGNDKVSFLAGYHFDQYNLSFRQYS
CCCCCCCCCCCCCHHHHHHHHHEECEEEEECCEEEECCCCEEEEEEEEECCCCCCEEEEE
LTDYSTLTRGALQANRNNDGQTSMHAMFAQSTFRFLPQWDVTAGVRQEWWAATKGVVGNL
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECC
EVPDRSLAATSPKVSVGYEPGQWKYRYSFGRAHRFPVIAELYQSLSTPTSILTANAMLKP
CCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHEEEECEEECC
ENGVHHNFMVEYGLPKGYIRVNAFRDDIKDAIQQVNTVSGVVITSGFQNIGQVSTTGVEL
CCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCEEE
IYDQRRILGSKLDFMFNGTWMNAKVEKGPIVDFTTSTGVPADYNLTGKQIIRLPHWRANF
EEHHHHHHCCCCCEEECCEEEEEEECCCCEEEEECCCCCCCCCCCCHHHEEECCCCCCCE
FGTYHMTEAWDISLSGRYTSDSFNDPDNGDHVNNVFGSQSDFFFMDFKTSYRYKFQNGLK
EEEEECCEEEEEEECCEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCEEEHHHHHHH
SRFSFGISNLNNDKAWVFHPYPQRTYLVEAAFSY
HHHHHHHCCCCCCCEEEECCCCCCEEEEEEEECC
>Mature Secondary Structure
MKRIPFALVGLLCVPSAWAMQEIEQPKQFSQKRIPVRLPATSLSMNPAQSDTPVSSMGSE
CCCCHHHHHHHHHCCCHHHHHHHHCHHHHHHCCCCEEECCCCCCCCCCCCCCCHHHHCCH
TRSGMLVAEATAVTTSGQPQTGETGTGKPDKDREDKENKGGKEKKDDIPAVQKETVFKEM
HHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHH
VVTGETERDTHFTSPSTRVTRAQIERQNAQTTEEVLKYMPSLQIRQRYVGDPNGVLGIRG
HHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHCCCCCCEEEECC
ADMFSTARNMVYADGLPLHNFLQATFNGAPRWSLVGPNEIDSVDVVYGPFSAEYSGNSIG
CHHHHHHCCEEEECCCCHHHHHHHHCCCCCCEEECCCCCCCCEEEEECCCCCCCCCCCCC
GVVNIKTRMPHKQEFYVESSLFIQPFKIYGPDKGTFIGDRQYVSYGNRIQDKFTVFLAYN
EEEEEEECCCCCHHEEEECCEEEEEEEEECCCCCCEECCHHHHHCCCCCCCEEEEEEEEE
RLEAQSHPQSYFIDNTGLFDVPGGTPVSGGIRTPDTRGTPSVIYGDTGPEKVNTHLFKGK
HHHCCCCCCEEEECCCCEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHCCEEECCC
FGYDITSNLQALFTVAYEDRTRHQNRPRNYLRDGSGNLFWGGPAPTCAPGAPCANPENAL
CCCCHHCCCEEEEEEEECHHHHHCCCCHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHCC
GNASLDGTRFDVMQRGFGGSQDKRETLNLGLSLRGALTPDWNIDTTMSYFDVLKDIRASA
CCCCCCCHHHHHHHCCCCCCCCCHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
FFNQGDPANSGTGQLQDFRRFSWLNYDLKLSAPVLLGNDKVSFLAGYHFDQYNLSFRQYS
CCCCCCCCCCCCCHHHHHHHHHEECEEEEECCEEEECCCCEEEEEEEEECCCCCCEEEEE
LTDYSTLTRGALQANRNNDGQTSMHAMFAQSTFRFLPQWDVTAGVRQEWWAATKGVVGNL
CCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEECC
EVPDRSLAATSPKVSVGYEPGQWKYRYSFGRAHRFPVIAELYQSLSTPTSILTANAMLKP
CCCCCCCCCCCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCHHEEEECEEECC
ENGVHHNFMVEYGLPKGYIRVNAFRDDIKDAIQQVNTVSGVVITSGFQNIGQVSTTGVEL
CCCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHCCEEEECCCHHCCCCCCCCEEE
IYDQRRILGSKLDFMFNGTWMNAKVEKGPIVDFTTSTGVPADYNLTGKQIIRLPHWRANF
EEHHHHHHCCCCCEEECCEEEEEEECCCCEEEEECCCCCCCCCCCCHHHEEECCCCCCCE
FGTYHMTEAWDISLSGRYTSDSFNDPDNGDHVNNVFGSQSDFFFMDFKTSYRYKFQNGLK
EEEEECCEEEEEEECCEECCCCCCCCCCCCHHHHHCCCCCCEEEEEECCCEEEHHHHHHH
SRFSFGISNLNNDKAWVFHPYPQRTYLVEAAFSY
HHHHHHHCCCCCCCEEEECCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA