| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is engD [H]
Identifier: 82701726
GI number: 82701726
Start: 676959
End: 678062
Strand: Direct
Name: engD [H]
Synonym: Nmul_A0592
Alternate gene names: 82701726
Gene position: 676959-678062 (Clockwise)
Preceding gene: 82701725
Following gene: 82701729
Centisome position: 21.26
GC content: 55.43
Gene sequence:
>1104_bases ATGAGCCTGAAATGCGGTATTGTTGGCTTGCCCAACGTCGGAAAATCCACCCTCTTCAATGCCCTCACCAAGGCTGGCAT CGCTGCCGAGAACTACCCCTTCTGCACCATCGAACCGAATGTGGGCATTGTCGAAGTTCCCGACTCTCGGCTGACTGAAC TTGCTGCGATCGTCAAGCCGCAAAAGGTGCAGTCTGCAGTGGTTGAATTCGTCGATATTGCCGGTCTTGTCGCAGGGGCT TCGAAAGGAGAGGGATTGGGCAACAAATTTCTTGCCACCATTCGTGAGACCGACGGCATCATCAATATGGTGCGCTGCTT CAAGAATGACAACGTGGTGCACGTCTCCGGCAAAGTCGATCCCATCTCGGATATCGAAACCATCCAGACTGAACTGGCAC TCGCCGATCTGGCCACCGTCGAAAAGGTGGTACAACGGGAAACCAAGCTTGCCAAGTCCGGTGACAAGGAAGCGGTCAAG TTCGTCGCGCTGCTCGAAAAGGTAAGGGAGCATCTCGACCAGGGCAAGCCGGTAAGAAGTCTCGGGTTGGCTGAAGGACT TGATAAGGAACAACAGGAACTGCTCAAGCCGCTATGCCTGCTCACTGCCAAACCTGCGATCTATGTGGCTAACGTGGACG AAAAAGGATTCACCGGTAATCCGCTGCTGGCACGGGTGGAAGAATATGCGGCAGGCGAGGGCGCGCCTGTCGTTGCCATC TGCGCCGCCCTCGAATCCGAAATTGCCGAGATGCCGGATGAGGACAAGCAGGTTTTTCTCGCCGACATGAATCTGGAAGA ACCGGGGCTCAACCGCCTGGTGCGCGCCGCCTATCAACTGCTGGGGCTGCAGACCTACTTTACCGCTGGGGTGAAGGAAG TGCGCGCCTGGACCATATCAAAAGGAGATACCGCGCCCCAAGCCGCTGCTGTCATTCATACCGATTTCGAAAAGGGCTTT ATCCGCGCCGAGGTCATCAGCTATGACGACTTCGTTACCTGCAAAGGTGAGCAGGGTGCCAAGGAGGCAGGCAAGATGCG GCTGGAGGGAAAGGAGTATGTCGTCAGAGATGGGGATGTGATGCATTTTCGGTTTAACGTCTAA
Upstream 100 bases:
>100_bases CCGAAAACGGAGATTTAGCCTGCTGCGTGAAAATGACGGAACAACTTTCATACCCCTTTAACCATTACAGCCTGTCTTAA ACGAGTAACCAAATCAAACC
Downstream 100 bases:
>100_bases GCCTGAGTCCTTGTCTTATAGTGACGACCATGCTTTCCAAGCATGAGGCGGACAAATCTGGACACTCCATGATGACCTTG GTTGTGACTGGCGTCACCAG
Product: GTP-dependent nucleic acid-binding protein EngD
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELAAIVKPQKVQSAVVEFVDIAGLVAGA SKGEGLGNKFLATIRETDGIINMVRCFKNDNVVHVSGKVDPISDIETIQTELALADLATVEKVVQRETKLAKSGDKEAVK FVALLEKVREHLDQGKPVRSLGLAEGLDKEQQELLKPLCLLTAKPAIYVANVDEKGFTGNPLLARVEEYAAGEGAPVVAI CAALESEIAEMPDEDKQVFLADMNLEEPGLNRLVRAAYQLLGLQTYFTAGVKEVRAWTISKGDTAPQAAAVIHTDFEKGF IRAEVISYDDFVTCKGEQGAKEAGKMRLEGKEYVVRDGDVMHFRFNV
Sequences:
>Translated_367_residues MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELAAIVKPQKVQSAVVEFVDIAGLVAGA SKGEGLGNKFLATIRETDGIINMVRCFKNDNVVHVSGKVDPISDIETIQTELALADLATVEKVVQRETKLAKSGDKEAVK FVALLEKVREHLDQGKPVRSLGLAEGLDKEQQELLKPLCLLTAKPAIYVANVDEKGFTGNPLLARVEEYAAGEGAPVVAI CAALESEIAEMPDEDKQVFLADMNLEEPGLNRLVRAAYQLLGLQTYFTAGVKEVRAWTISKGDTAPQAAAVIHTDFEKGF IRAEVISYDDFVTCKGEQGAKEAGKMRLEGKEYVVRDGDVMHFRFNV >Mature_366_residues SLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELAAIVKPQKVQSAVVEFVDIAGLVAGAS KGEGLGNKFLATIRETDGIINMVRCFKNDNVVHVSGKVDPISDIETIQTELALADLATVEKVVQRETKLAKSGDKEAVKF VALLEKVREHLDQGKPVRSLGLAEGLDKEQQELLKPLCLLTAKPAIYVANVDEKGFTGNPLLARVEEYAAGEGAPVVAIC AALESEIAEMPDEDKQVFLADMNLEEPGLNRLVRAAYQLLGLQTYFTAGVKEVRAWTISKGDTAPQAAAVIHTDFEKGFI RAEVISYDDFVTCKGEQGAKEAGKMRLEGKEYVVRDGDVMHFRFNV
Specific function: GTP-dependent nucleic acid-binding protein which may act as a translation factor [H]
COG id: COG0012
COG function: function code J; Predicted GTPase, probable translation factor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI58761500, Length=372, Percent_Identity=44.6236559139785, Blast_Score=309, Evalue=3e-84, Organism=Homo sapiens, GI58761502, Length=221, Percent_Identity=39.8190045248869, Blast_Score=160, Evalue=2e-39, Organism=Escherichia coli, GI1787454, Length=367, Percent_Identity=63.4877384196185, Blast_Score=477, Evalue=1e-136, Organism=Escherichia coli, GI1789574, Length=136, Percent_Identity=30.8823529411765, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI17509631, Length=370, Percent_Identity=41.0810810810811, Blast_Score=281, Evalue=3e-76, Organism=Saccharomyces cerevisiae, GI6319499, Length=374, Percent_Identity=38.5026737967914, Blast_Score=242, Evalue=6e-65, Organism=Saccharomyces cerevisiae, GI6321773, Length=384, Percent_Identity=33.8541666666667, Blast_Score=210, Evalue=2e-55, Organism=Saccharomyces cerevisiae, GI6321649, Length=143, Percent_Identity=39.8601398601399, Blast_Score=86, Evalue=1e-17, Organism=Drosophila melanogaster, GI24640873, Length=371, Percent_Identity=41.7789757412399, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24640877, Length=371, Percent_Identity=41.7789757412399, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24640875, Length=371, Percent_Identity=41.7789757412399, Blast_Score=279, Evalue=3e-75, Organism=Drosophila melanogaster, GI24640879, Length=329, Percent_Identity=39.209726443769, Blast_Score=221, Evalue=9e-58, Organism=Drosophila melanogaster, GI24585318, Length=140, Percent_Identity=33.5714285714286, Blast_Score=71, Evalue=1e-12,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012675 - InterPro: IPR004396 - InterPro: IPR013029 - InterPro: IPR006073 - InterPro: IPR002917 - InterPro: IPR012676 - InterPro: IPR023192 [H]
Pfam domain/function: PF01926 MMR_HSR1; PF06071 YchF-GTPase_C [H]
EC number: NA
Molecular weight: Translated: 39677; Mature: 39546
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00443 GATASE_TYPE_II
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELAAIVKP CCCEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHCC QKVQSAVVEFVDIAGLVAGASKGEGLGNKFLATIRETDGIINMVRCFKNDNVVHVSGKVD HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC PISDIETIQTELALADLATVEKVVQRETKLAKSGDKEAVKFVALLEKVREHLDQGKPVRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH LGLAEGLDKEQQELLKPLCLLTAKPAIYVANVDEKGFTGNPLLARVEEYAAGEGAPVVAI HHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHH CAALESEIAEMPDEDKQVFLADMNLEEPGLNRLVRAAYQLLGLQTYFTAGVKEVRAWTIS HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC KGDTAPQAAAVIHTDFEKGFIRAEVISYDDFVTCKGEQGAKEAGKMRLEGKEYVVRDGDV CCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCHHHCCEEECCCEEEEECCCE MHFRFNV EEEEECC >Mature Secondary Structure SLKCGIVGLPNVGKSTLFNALTKAGIAAENYPFCTIEPNVGIVEVPDSRLTELAAIVKP CCEECEEECCCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHHCC QKVQSAVVEFVDIAGLVAGASKGEGLGNKFLATIRETDGIINMVRCFKNDNVVHVSGKVD HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC PISDIETIQTELALADLATVEKVVQRETKLAKSGDKEAVKFVALLEKVREHLDQGKPVRS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHH LGLAEGLDKEQQELLKPLCLLTAKPAIYVANVDEKGFTGNPLLARVEEYAAGEGAPVVAI HHHHHCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCHHHH CAALESEIAEMPDEDKQVFLADMNLEEPGLNRLVRAAYQLLGLQTYFTAGVKEVRAWTIS HHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEC KGDTAPQAAAVIHTDFEKGFIRAEVISYDDFVTCKGEQGAKEAGKMRLEGKEYVVRDGDV CCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEECCCCCCHHHCCEEECCCEEEEECCCE MHFRFNV EEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA