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The map label for this gene is yebA [C]

Identifier: 82701688

GI number: 82701688

Start: 640663

End: 642036

Strand: Direct

Name: yebA [C]

Synonym: Nmul_A0554

Alternate gene names: 82701688

Gene position: 640663-642036 (Clockwise)

Preceding gene: 82701674

Following gene: 82701689

Centisome position: 20.12

GC content: 58.01

Gene sequence:

>1374_bases
ATGCCTGGCAACAAGCAGACATGGGCGCGCAAAAAAAACAGATTACATTGGCTCCTTTATGAGGGACTTGAGATAGTGAG
TAACAGCCAGGCTTTTACACTTACAAGAAAAACCCTGCGCGGCCTGATACTGTTATCGAGCATTCCGTTGTTTGGAATGG
TGGCAGCCTTCGGTATTGCCCCCGATACTGCGGTGGAAGACGTACCGGTCGAGCAGGTTGTCCTCGGTCTGGAGATTCCG
GAGATTCGCTCGAGGCCGGCGGAGGGGATGACTTTTTGGCGTCATGAACGTATCCAGCAGGGCGATACAATCGGGAGCCT
GCTTTCCCGGCTTGAAGTGAATAATCAGGACGTGGCACGCCTCATTCGGGATACCTCCGAGCTGAAGGCCTTGCATCCGC
TGGCCGCGGGCAGAATGGTGCATGCCGAAACCAGCGCCGCGGGCGAATTGCTGCTGCTGCGCTACTTCCCCGGCGGCAGC
GATCAGGTGGTGCTGGAAAAACGCGACGGCAGCTATGTGGTGAGCGACAGGCCGGCATTGCTGGAAACCCATATCCAGAT
GAAATCAGGCGTGATCGAAAGCTCGCTTTTTGCCGCGATCGACCGCGCGGGGATTCCGGACAGCATAGCTTCCCAGATCG
TCGATATCCTGTCTTCCCAAATAGATTTCCACCGTGATCTGCGCAAGGGTGACCGTTTTACAGTGGTGTACGATTCCCTC
TACGGCAACGGGGAACCGACGAGAGCCGGCCGGGTGCTGGCGGTGGAGTTCGTCAACCAGGGAGTGCCTTACCGGGGAGT
ATATTTCCCCGGAAGCGACGGTGGAGAAGGCGGCTATTACACGCCGGACGGCAAGAACCTGCGCAGGGTATTTCTGCGCT
CGCCGCTGGAATTTTCCCGCATCAGTTCCGGCTTTTCCAGCGGCCGCTTCCATCCCATCCTGAAAAAATGGCGGGCCCAT
AAGGGCATCGACTACGTGGCGCCCACCGGCACGGGGGTAAAGGCGGTTGCCGATGGCGTCGTGGCGGTAGCGGGATGGGA
AGCGGGATATGGAAATTTCATCATCCTCGAGCATGAAGGATCGTATGCCACGGTCTACGGCCACCTGTCGGCTTTCGCCA
AAGGGTTGCGCAAGGGTCAGCGTGTCCGTCAGGGATATGTCATTGGCCGGGTGGGAGCCACCGGCTTGGCGAGCGGGCCT
CATCTGCACTTTGAGTTCCGTGTCAACGGCATTCAACGCGATCCTCTGAAGGAGCCGATGCCGGAAGGAAAACCGATCGC
TCCCGCGCACCTCGCGGCATTTTACGAATCCACGAAATCATCGATGGCGAGGCTCGATATGCTGCACGGCACCAATCTCG
CATTGCTGGATTAA

Upstream 100 bases:

>100_bases
CTGGCTGTTTCGCCGTGGGCCACGGAGGGTGGAGAGAGCGGCCGATAGCCGGACGCCGGCACCCAAGAGATTCGCCCGGC
CGATTTCCCGCACAAGGGAG

Downstream 100 bases:

>100_bases
CGGCGGTGGCCGAACGGGTCGACTGGATAAAAGTCCCGTCAACGGGAGAGATTTGAAGGCGGCGTACTATATCGGCATCA
TGTCGGGCACCAGTCTGGAT

Product: peptidase M23B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MPGNKQTWARKKNRLHWLLYEGLEIVSNSQAFTLTRKTLRGLILLSSIPLFGMVAAFGIAPDTAVEDVPVEQVVLGLEIP
EIRSRPAEGMTFWRHERIQQGDTIGSLLSRLEVNNQDVARLIRDTSELKALHPLAAGRMVHAETSAAGELLLLRYFPGGS
DQVVLEKRDGSYVVSDRPALLETHIQMKSGVIESSLFAAIDRAGIPDSIASQIVDILSSQIDFHRDLRKGDRFTVVYDSL
YGNGEPTRAGRVLAVEFVNQGVPYRGVYFPGSDGGEGGYYTPDGKNLRRVFLRSPLEFSRISSGFSSGRFHPILKKWRAH
KGIDYVAPTGTGVKAVADGVVAVAGWEAGYGNFIILEHEGSYATVYGHLSAFAKGLRKGQRVRQGYVIGRVGATGLASGP
HLHFEFRVNGIQRDPLKEPMPEGKPIAPAHLAAFYESTKSSMARLDMLHGTNLALLD

Sequences:

>Translated_457_residues
MPGNKQTWARKKNRLHWLLYEGLEIVSNSQAFTLTRKTLRGLILLSSIPLFGMVAAFGIAPDTAVEDVPVEQVVLGLEIP
EIRSRPAEGMTFWRHERIQQGDTIGSLLSRLEVNNQDVARLIRDTSELKALHPLAAGRMVHAETSAAGELLLLRYFPGGS
DQVVLEKRDGSYVVSDRPALLETHIQMKSGVIESSLFAAIDRAGIPDSIASQIVDILSSQIDFHRDLRKGDRFTVVYDSL
YGNGEPTRAGRVLAVEFVNQGVPYRGVYFPGSDGGEGGYYTPDGKNLRRVFLRSPLEFSRISSGFSSGRFHPILKKWRAH
KGIDYVAPTGTGVKAVADGVVAVAGWEAGYGNFIILEHEGSYATVYGHLSAFAKGLRKGQRVRQGYVIGRVGATGLASGP
HLHFEFRVNGIQRDPLKEPMPEGKPIAPAHLAAFYESTKSSMARLDMLHGTNLALLD
>Mature_456_residues
PGNKQTWARKKNRLHWLLYEGLEIVSNSQAFTLTRKTLRGLILLSSIPLFGMVAAFGIAPDTAVEDVPVEQVVLGLEIPE
IRSRPAEGMTFWRHERIQQGDTIGSLLSRLEVNNQDVARLIRDTSELKALHPLAAGRMVHAETSAAGELLLLRYFPGGSD
QVVLEKRDGSYVVSDRPALLETHIQMKSGVIESSLFAAIDRAGIPDSIASQIVDILSSQIDFHRDLRKGDRFTVVYDSLY
GNGEPTRAGRVLAVEFVNQGVPYRGVYFPGSDGGEGGYYTPDGKNLRRVFLRSPLEFSRISSGFSSGRFHPILKKWRAHK
GIDYVAPTGTGVKAVADGVVAVAGWEAGYGNFIILEHEGSYATVYGHLSAFAKGLRKGQRVRQGYVIGRVGATGLASGPH
LHFEFRVNGIQRDPLKEPMPEGKPIAPAHLAAFYESTKSSMARLDMLHGTNLALLD

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=350, Percent_Identity=27.1428571428571, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=39.3939393939394, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI87082174, Length=108, Percent_Identity=39.8148148148148, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR007340
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF04225 OapA; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 50088; Mature: 49957

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGNKQTWARKKNRLHWLLYEGLEIVSNSQAFTLTRKTLRGLILLSSIPLFGMVAAFGIA
CCCCCCHHHHHHCCEEEEEECCHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHCCC
PDTAVEDVPVEQVVLGLEIPEIRSRPAEGMTFWRHERIQQGDTIGSLLSRLEVNNQDVAR
CCCCCCCCCHHHHEECCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH
LIRDTSELKALHPLAAGRMVHAETSAAGELLLLRYFPGGSDQVVLEKRDGSYVVSDRPAL
HHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCHH
LETHIQMKSGVIESSLFAAIDRAGIPDSIASQIVDILSSQIDFHRDLRKGDRFTVVYDSL
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
YGNGEPTRAGRVLAVEFVNQGVPYRGVYFPGSDGGEGGYYTPDGKNLRRVFLRSPLEFSR
CCCCCCCCCCCEEEEEEHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHH
ISSGFSSGRFHPILKKWRAHKGIDYVAPTGTGVKAVADGVVAVAGWEAGYGNFIILEHEG
HHCCCCCCCCCHHHHHHHHHCCCCEECCCCCCHHHHHCCEEEEEECCCCCCCEEEEEECC
SYATVYGHLSAFAKGLRKGQRVRQGYVIGRVGATGLASGPHLHFEFRVNGIQRDPLKEPM
CEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCC
PEGKPIAPAHLAAFYESTKSSMARLDMLHGTNLALLD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC
>Mature Secondary Structure 
PGNKQTWARKKNRLHWLLYEGLEIVSNSQAFTLTRKTLRGLILLSSIPLFGMVAAFGIA
CCCCCHHHHHHCCEEEEEECCHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHCCC
PDTAVEDVPVEQVVLGLEIPEIRSRPAEGMTFWRHERIQQGDTIGSLLSRLEVNNQDVAR
CCCCCCCCCHHHHEECCCCHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCCCHHHHH
LIRDTSELKALHPLAAGRMVHAETSAAGELLLLRYFPGGSDQVVLEKRDGSYVVSDRPAL
HHHHHHHHHHHHHHHCCCEEEECCCCCCCEEEEEECCCCCCEEEEEECCCCEEECCCCHH
LETHIQMKSGVIESSLFAAIDRAGIPDSIASQIVDILSSQIDFHRDLRKGDRFTVVYDSL
HHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
YGNGEPTRAGRVLAVEFVNQGVPYRGVYFPGSDGGEGGYYTPDGKNLRRVFLRSPLEFSR
CCCCCCCCCCCEEEEEEHHCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHH
ISSGFSSGRFHPILKKWRAHKGIDYVAPTGTGVKAVADGVVAVAGWEAGYGNFIILEHEG
HHCCCCCCCCCHHHHHHHHHCCCCEECCCCCCHHHHHCCEEEEEECCCCCCCEEEEEECC
SYATVYGHLSAFAKGLRKGQRVRQGYVIGRVGATGLASGPHLHFEFRVNGIQRDPLKEPM
CEEEEHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCC
PEGKPIAPAHLAAFYESTKSSMARLDMLHGTNLALLD
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]