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The map label for this gene is rlpB [C]

Identifier: 82701646

GI number: 82701646

Start: 580586

End: 581098

Strand: Direct

Name: rlpB [C]

Synonym: Nmul_A0512

Alternate gene names: 82701646

Gene position: 580586-581098 (Clockwise)

Preceding gene: 82701645

Following gene: 82701647

Centisome position: 18.23

GC content: 56.53

Gene sequence:

>513_bases
ATGAAAAAAATCCTGTTGCTTACATGCTGTCTCTTGCTCGCGGCTTGCGGCTTTCAGTTGCGGGGCACCGCCGCGCTTCC
GTTTGATACGCTTTATATTTCCTTCCCGCAAGGACATCCCATCGGTACCGATCTCAGGCGCCTCGTTCGGGCGAGCACCA
GCACTCGCCTCGTTGACAACCGGAAAAAGGCCGAAGCCATACTGGAGATTCTCAGCGTCACCAATGACAGACAGATCATG
TCCGTGTCAGGCGGCGGGCGCGTTCTGGAGTTTGAACTCCGGTACCGGGTTTCCTTCCGGCTGCTCGATGCCAAAGGGGA
GGAACTCATTCCCACCAATGAACTGGCCCTGCGTCGAATCATGCCTTTTACCAATCAGCAGGTGGTCGCGAAGGAGGGGG
AAGAGGCAATGCTCGTGCGGGAAATGCAGAGTGATTCGGCAGATCAGATCGTGCGGCGCCTTGGAGCAGTCAAGGTGGCG
GAACTGAATAAGTCTCCACAGGTGAACCCCTGA

Upstream 100 bases:

>100_bases
TTCATCGATGGAAAAGCAGTTAAAAAAGTGGTGATGGTGCCAGGGAAACTGGTCAATATCGTCATTTGAAGATACGAAAA
CCGGAACTCGAGGATTGCCG

Downstream 100 bases:

>100_bases
CCGTTGACGCCTGTGTTGCGGTAACCTGAAGGCGAAGGCATGCGTATTGCGCCCGAACAGCTTGCGCGGCATCTCGATAA
ACAGCTTGCACCGCTTTATA

Product: rare lipoprotein B

Products: NA

Alternate protein names: Lipoprotein; Lipoprotein B; Lipoprotein B Transmembrane; Lipoprotein B Transmembrane; Rare Lipoprotein B Family; Lipoprotein B Transmembrane Protein

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MKKILLLTCCLLLAACGFQLRGTAALPFDTLYISFPQGHPIGTDLRRLVRASTSTRLVDNRKKAEAILEILSVTNDRQIM
SVSGGGRVLEFELRYRVSFRLLDAKGEELIPTNELALRRIMPFTNQQVVAKEGEEAMLVREMQSDSADQIVRRLGAVKVA
ELNKSPQVNP

Sequences:

>Translated_170_residues
MKKILLLTCCLLLAACGFQLRGTAALPFDTLYISFPQGHPIGTDLRRLVRASTSTRLVDNRKKAEAILEILSVTNDRQIM
SVSGGGRVLEFELRYRVSFRLLDAKGEELIPTNELALRRIMPFTNQQVVAKEGEEAMLVREMQSDSADQIVRRLGAVKVA
ELNKSPQVNP
>Mature_170_residues
MKKILLLTCCLLLAACGFQLRGTAALPFDTLYISFPQGHPIGTDLRRLVRASTSTRLVDNRKKAEAILEILSVTNDRQIM
SVSGGGRVLEFELRYRVSFRLLDAKGEELIPTNELALRRIMPFTNQQVVAKEGEEAMLVREMQSDSADQIVRRLGAVKVA
ELNKSPQVNP

Specific function: Unknown

COG id: COG2980

COG function: function code M; Rare lipoprotein B

Gene ontology:

Cell location: Attached To The Membrane By A Lipid Anchor [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18968; Mature: 18968

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILLLTCCLLLAACGFQLRGTAALPFDTLYISFPQGHPIGTDLRRLVRASTSTRLVDN
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHC
RKKAEAILEILSVTNDRQIMSVSGGGRVLEFELRYRVSFRLLDAKGEELIPTNELALRRI
HHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHH
MPFTNQQVVAKEGEEAMLVREMQSDSADQIVRRLGAVKVAELNKSPQVNP
CCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKKILLLTCCLLLAACGFQLRGTAALPFDTLYISFPQGHPIGTDLRRLVRASTSTRLVDN
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCHHHHHHC
RKKAEAILEILSVTNDRQIMSVSGGGRVLEFELRYRVSFRLLDAKGEELIPTNELALRRI
HHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHH
MPFTNQQVVAKEGEEAMLVREMQSDSADQIVRRLGAVKVAELNKSPQVNP
CCCCCCCHHHCCCCHHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA