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The map label for this gene is 82701588

Identifier: 82701588

GI number: 82701588

Start: 504833

End: 505444

Strand: Direct

Name: 82701588

Synonym: Nmul_A0454

Alternate gene names: NA

Gene position: 504833-505444 (Clockwise)

Preceding gene: 82701584

Following gene: 82701589

Centisome position: 15.85

GC content: 55.88

Gene sequence:

>612_bases
ATGGGTAAGAACTTTGCCGGAAGCGGGAATTTTGGTTACGACCGGCTCGCGGCGGGTCTTGTGATTGCGCTTGCCATGGG
CGCATGCAATCCGACAGAACAAGGACATATAAAGGAGGTCACGGGCCACTTGCCGGATTTGAGTTTTTCACTCAGCTCCG
ATGAGGGGCAGCCGGTTACAGCCAAAACATATGAGGGAAAAGTATTGCTCATGTATTTTGGATTTACACATTGCCGGGAA
GAGTGTCCGATTTCCATGGCGCGTCTTACGCGGGTAATGCATCTCCTCGGGGAAGACGCAAAGCGGACGCATATCCTCTT
TGTAACCGTGGACCCGACGCGGGACGGTCCCAGGGAATTGCGTCGCTATCTGGCGCAATTCAATCTCGCGCAGGCGACGG
GATTGACCGGTACTGCGGATGAAATCGGGGAGCTTGCAAAACGATGCCGCAACGCATTCCGGCCGCATTTTCCCCCTGGC
GGAGATGGCGGCCTCATGCATGGCGATGCGGTCTATATATTTGACGCCCAGGGCCATGCCCGCCTACTGGCAACATCCGC
CGATCCTGAAGAGACTCTGGCGGAAGATCTGCGGGATTTGCTTCCTTCCTGA

Upstream 100 bases:

>100_bases
TGCAATAGCGAAATTGAATGCTATATTGAAACTGACCGATATTGAAACTGACCGGTTGACTCTCCAGGAAGGGCTCCTCA
AGAATTTTCGATGCTTCTCA

Downstream 100 bases:

>100_bases
AAACTTCTCCGGGTAGTGACGGACATCAATTGTAATGGAATGGTTTTACTGGCTGGTGCCTTGGGAAGAGTCTATTCTGG
TGGTTGCCGCCGCTGGGAGC

Product: electron transport protein SCO1/SenC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MGKNFAGSGNFGYDRLAAGLVIALAMGACNPTEQGHIKEVTGHLPDLSFSLSSDEGQPVTAKTYEGKVLLMYFGFTHCRE
ECPISMARLTRVMHLLGEDAKRTHILFVTVDPTRDGPRELRRYLAQFNLAQATGLTGTADEIGELAKRCRNAFRPHFPPG
GDGGLMHGDAVYIFDAQGHARLLATSADPEETLAEDLRDLLPS

Sequences:

>Translated_203_residues
MGKNFAGSGNFGYDRLAAGLVIALAMGACNPTEQGHIKEVTGHLPDLSFSLSSDEGQPVTAKTYEGKVLLMYFGFTHCRE
ECPISMARLTRVMHLLGEDAKRTHILFVTVDPTRDGPRELRRYLAQFNLAQATGLTGTADEIGELAKRCRNAFRPHFPPG
GDGGLMHGDAVYIFDAQGHARLLATSADPEETLAEDLRDLLPS
>Mature_202_residues
GKNFAGSGNFGYDRLAAGLVIALAMGACNPTEQGHIKEVTGHLPDLSFSLSSDEGQPVTAKTYEGKVLLMYFGFTHCREE
CPISMARLTRVMHLLGEDAKRTHILFVTVDPTRDGPRELRRYLAQFNLAQATGLTGTADEIGELAKRCRNAFRPHFPPGG
DGGLMHGDAVYIFDAQGHARLLATSADPEETLAEDLRDLLPS

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI4759068, Length=114, Percent_Identity=34.2105263157895, Blast_Score=75, Evalue=6e-14,
Organism=Homo sapiens, GI281182727, Length=137, Percent_Identity=28.4671532846715, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI281182722, Length=137, Percent_Identity=28.4671532846715, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI281182716, Length=137, Percent_Identity=28.4671532846715, Blast_Score=64, Evalue=6e-11,
Organism=Homo sapiens, GI153791313, Length=137, Percent_Identity=28.4671532846715, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17531419, Length=140, Percent_Identity=27.8571428571429, Blast_Score=68, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6319498, Length=134, Percent_Identity=34.3283582089552, Blast_Score=84, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6319511, Length=134, Percent_Identity=35.0746268656716, Blast_Score=77, Evalue=2e-15,
Organism=Drosophila melanogaster, GI19920710, Length=115, Percent_Identity=33.0434782608696, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 22060; Mature: 21929

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKNFAGSGNFGYDRLAAGLVIALAMGACNPTEQGHIKEVTGHLPDLSFSLSSDEGQPVT
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCEE
AKTYEGKVLLMYFGFTHCREECPISMARLTRVMHLLGEDAKRTHILFVTVDPTRDGPREL
EEECCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
RRYLAQFNLAQATGLTGTADEIGELAKRCRNAFRPHFPPGGDGGLMHGDAVYIFDAQGHA
HHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEEEEECCCCE
RLLATSADPEETLAEDLRDLLPS
EEEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GKNFAGSGNFGYDRLAAGLVIALAMGACNPTEQGHIKEVTGHLPDLSFSLSSDEGQPVT
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCEE
AKTYEGKVLLMYFGFTHCREECPISMARLTRVMHLLGEDAKRTHILFVTVDPTRDGPREL
EEECCCEEEEEECCCHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCHHHH
RRYLAQFNLAQATGLTGTADEIGELAKRCRNAFRPHFPPGGDGGLMHGDAVYIFDAQGHA
HHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEEEEECCCCE
RLLATSADPEETLAEDLRDLLPS
EEEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA