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The map label for this gene is lptF [H]

Identifier: 82701536

GI number: 82701536

Start: 445010

End: 446086

Strand: Direct

Name: lptF [H]

Synonym: Nmul_A0402

Alternate gene names: 82701536

Gene position: 445010-446086 (Clockwise)

Preceding gene: 82701535

Following gene: 82701537

Centisome position: 13.98

GC content: 53.95

Gene sequence:

>1077_bases
GTGAAAATAATAGAACGATATATCACGCGGGAACTGCTGATACCGTTTATGGTAGTCACCGTAATCCTTGCGACATTGTT
TGCAAGTTTCAGTATGGCCCGTTTTCTTGCCGGAGCAGTGACAGATTCGCTTGGCCTTATCCCCGTGCTCAGGCTCGTGT
TTCTGAAAACGCTGATCGCACTGGAAGTGCTGATGCCCATTGCCCTGTACGTGGCTGTCATCATGGGACTGGGTCGCCTG
CACCGGGATCAGGAAATAGTCGTTTTGCGTTCCGCTGGGGTCAGCGAACACCGCATTATCTATGCGGTGCTCATCGTTGC
GATTCCTATGGGGCTTATCAGTGGTTTATTTTCCATTTTTGCGCGTCCATGGGCGTATGAGGAAAGCTACCTACTCAATG
CCCAGGCAGAGGCAGAGTTGAATACGGATCGGTTCCGCGCCGGGCGTTTCTACGGCAGCGAAAAAAAAGGCCGGGTGATT
TATGTGCAGGCCAAGGATAGCTCGGGCAAGCAGATGGGAGAGGTATTCCACTATCTGAACAAGCATGACAGCAGCGAGAT
CATTCTTGCCAAGAAAGCTCACCAGCCTGAGCTTGTGTTCGGCCAGCGCCCCCAGATACATCTGCTGGATGGCTCCATTT
ACCGGCTATCGCACACCGGAAAAGGCGATACCGTCGTCCAGTTTGAAAAGCTGGTTTATTTCACGGACAGCGGAAACGTA
ACGGATTACAGGCGCAAGGCTGCCTCTACCGCGGCATTGATGCAATCTGATCAGCCGCGGGATACTGCCGAGCTTCAGTG
GCGGCTGTCGCGCCCGCTGGCAACGATCCTGCTGGCGCTGATAGCGGTGCCCTTCAGCCGCGCTTCACCCCGCCAGACAA
AGGGAGATAAGACTTATTATCTGGCAGCTCTGGTTTTCGCCATTTACTACATTTTGAGCGGATTGGCCCAGACTTGGGTC
GAGCAGGGCACGATCGGGAGGGTGCCGGGTGTGTGGTGGCTCTATGCTGTCATGCTGCTGTTTGCAATCTCGTTATTATC
GCCTGGTTTCTGGCGGAAGTTGCCTTTGCGCAGATGA

Upstream 100 bases:

>100_bases
ACTAGCGCGCAAGGCGCCGGCTGCCGGAGGAGGGTCCGATTTGCACGGACCCACTCCTGAAATGTGAGAGGCTTGAATTC
CGATCAACGCGACAGGCAAC

Downstream 100 bases:

>100_bases
CAATAATTTACCGCTACCTGGGGCTCCAGGTTTTGATGGGTCTGGGAATCGCTACCGCGGTGCTTCTGCCGCTCTTCGGT
TTCCTTGATTTGCTGGATCA

Product: permease YjgP/YjgQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 358

Protein sequence:

>358_residues
MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAVTDSLGLIPVLRLVFLKTLIALEVLMPIALYVAVIMGLGRL
HRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSIFARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVI
YVQAKDSSGKQMGEVFHYLNKHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGNV
TDYRRKAASTAALMQSDQPRDTAELQWRLSRPLATILLALIAVPFSRASPRQTKGDKTYYLAALVFAIYYILSGLAQTWV
EQGTIGRVPGVWWLYAVMLLFAISLLSPGFWRKLPLRR

Sequences:

>Translated_358_residues
MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAVTDSLGLIPVLRLVFLKTLIALEVLMPIALYVAVIMGLGRL
HRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSIFARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVI
YVQAKDSSGKQMGEVFHYLNKHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGNV
TDYRRKAASTAALMQSDQPRDTAELQWRLSRPLATILLALIAVPFSRASPRQTKGDKTYYLAALVFAIYYILSGLAQTWV
EQGTIGRVPGVWWLYAVMLLFAISLLSPGFWRKLPLRR
>Mature_358_residues
MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAVTDSLGLIPVLRLVFLKTLIALEVLMPIALYVAVIMGLGRL
HRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSIFARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVI
YVQAKDSSGKQMGEVFHYLNKHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGNV
TDYRRKAASTAALMQSDQPRDTAELQWRLSRPLATILLALIAVPFSRASPRQTKGDKTYYLAALVFAIYYILSGLAQTWV
EQGTIGRVPGVWWLYAVMLLFAISLLSPGFWRKLPLRR

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI1790712, Length=371, Percent_Identity=23.7196765498652, Blast_Score=84, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 40301; Mature: 40301

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAVTDSLGLIPVLRLVFLKTLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LEVLMPIALYVAVIMGLGRLHRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSIF
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVIYVQAKDSSGKQMGEVFHYLN
HCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
KHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGNV
CCCCCCEEEEECCCCCCCEECCCCEEEEECCCEEEEECCCCCCCEEEEEEEEEEECCCCC
TDYRRKAASTAALMQSDQPRDTAELQWRLSRPLATILLALIAVPFSRASPRQTKGDKTYY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LAALVFAIYYILSGLAQTWVEQGTIGRVPGVWWLYAVMLLFAISLLSPGFWRKLPLRR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCC
>Mature Secondary Structure
MKIIERYITRELLIPFMVVTVILATLFASFSMARFLAGAVTDSLGLIPVLRLVFLKTLIA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LEVLMPIALYVAVIMGLGRLHRDQEIVVLRSAGVSEHRIIYAVLIVAIPMGLISGLFSIF
HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
ARPWAYEESYLLNAQAEAELNTDRFRAGRFYGSEKKGRVIYVQAKDSSGKQMGEVFHYLN
HCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHH
KHDSSEIILAKKAHQPELVFGQRPQIHLLDGSIYRLSHTGKGDTVVQFEKLVYFTDSGNV
CCCCCCEEEEECCCCCCCEECCCCEEEEECCCEEEEECCCCCCCEEEEEEEEEEECCCCC
TDYRRKAASTAALMQSDQPRDTAELQWRLSRPLATILLALIAVPFSRASPRQTKGDKTYY
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCHHHH
LAALVFAIYYILSGLAQTWVEQGTIGRVPGVWWLYAVMLLFAISLLSPGFWRKLPLRR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]